Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CHAT

Gene Name Gene ID Reads Annotation
CHAT ENSGALG00000002289 26 choline O-acetyltransferase [Source:NCBI gene;Acc:395314]











Genes with expression patterns similar to CHAT

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CHAT ENSGALG00000002289 26 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 choline O-acetyltransferase [Source:NCBI gene;Acc:395314]
2. TEX33 ENSGALG00000012490 11 2 - - - - - 1.000 - 1.000 - - testis expressed 33, transcript variant X2
3. CLDN16 ENSGALG00000025821 14 2 - - 1.000 - - 1.000 - - - - claudin 16 [Source:HGNC Symbol;Acc:HGNC:2037]
4. FAT2 ENSGALG00000004320 4 2 - - - - - 1.000 - 1.000 - - FAT atypical cadherin 2 [Source:HGNC Symbol;Acc:HGNC:3596]
5. ENSGALG00000028402 ENSGALG00000028402 5 1.987 - - 0.987 - - - - 1.000 - -
6. SNORD100 SNORD100 270 1.97 - - - - 1.000 - - 0.970 - -
7. LRRC32 9 1.957 - - 0.957 - - - - 1.000 - - leucine rich repeat containing 32
8. TNFRSF18 ENSGALG00000001882 12 1.892 - - - - - 0.892 - 1.000 - - TNF receptor superfamily member 18 [Source:NCBI gene;Acc:419424]
9. RAB43 ENSGALG00000005021 5 1.877 - - - - 0.877 1.000 - - - - RAB43, member RAS oncogene family [Source:NCBI gene;Acc:415970]
10. PSEN2 ENSGALG00000009073 7 1.839 - - - - - 1.000 - 0.839 - - presenilin 2 (Alzheimer disease 4) [Source:NCBI gene;Acc:374188]
11. QSOX1 ENSGALG00000003933 184 1.813 - - - - - 1.000 - - - 0.813 quiescin Q6 sulfhydryl oxidase 1 [Source:NCBI gene;Acc:373914]
12. ARL15 ENSGALG00000014911 13 1.801 - - - - 1.000 - - - - 0.801 ADP ribosylation factor like GTPase 15 [Source:HGNC Symbol;Acc:HGNC:25945]
13. FBXL4 ENSGALG00000015490 12 1.787 - - - - 1.000 - - - - 0.787 F-box and leucine rich repeat protein 4 [Source:HGNC Symbol;Acc:HGNC:13601]
14. SNTG2 ENSGALG00000016367 42 1.759 - - - - - - - 0.970 - 0.789 syntrophin gamma 2 [Source:HGNC Symbol;Acc:HGNC:13741]
15. SNORD61 SNORD61 12 1.748 - - 0.748 - - 1.000 - - - -
16. SULT ENSGALG00000011287 62 1.563 - - 0.759 - - 0.804 - - - - sulfotransferase [Source:NCBI gene;Acc:395933]
17. BRINP2 ENSGALG00000004448 26 1 - - - - 1.000 - - - - - BMP/retinoic acid inducible neural specific 2 [Source:HGNC Symbol;Acc:HGNC:13746]
18. EML5 ENSGALG00000010639 25 1 - - - - - - - 1.000 - - echinoderm microtubule associated protein like 5, transcript variant X1
19. ENSGALG00000003051 ENSGALG00000003051 1 1 - - - - 1.000 - - - - -
20. gga-mir-219b ENSGALG00000018278 1 1 - - - - - 1.000 - - - - gga-mir-219b [Source:miRBase;Acc:MI0015382]
21. ENSGALG00000028156 ENSGALG00000028156 1 1 - - 1.000 - - - - - - -
22. CAPS2 ENSGALG00000010208 0 1 - - - - - - - 1.000 - - calcyphosine 2 [Source:HGNC Symbol;Acc:HGNC:16471]
23. MFHAS1 ENSGALG00000011444 7 1 - - - - - 1.000 - - - - malignant fibrous histiocytoma amplified sequence 1 [Source:HGNC Symbol;Acc:HGNC:16982]
24. ATP6V1AL ENSGALG00000000048 21 1 - - 1.000 - - - - - - - ATPase H+ transporting V1 subunit A-like, transcript variant X2
25. C2CD3 ENSGALG00000017314 13 1 - - - - 1.000 - - - - - C2 calcium dependent domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24564]
26. GRPR ENSGALG00000027960 22 1 - - - - - - - 1.000 - - gastrin releasing peptide receptor [Source:NCBI gene;Acc:378928]
27. WDR63 ENSGALG00000008696 15 1 - - - - - - - 1.000 - - WD repeat domain 63 [Source:HGNC Symbol;Acc:HGNC:30711]
28. ENSGALG00000023869 ENSGALG00000023869 1 1 - - 1.000 - - - - - - -
29. CRCBL ENSGALG00000025881 3 1 - - - - - 1.000 - - - - cytokine receptor common subunit beta-like, transcript variant X3
30. OTOR ENSGALG00000008732 10 1 - - 1.000 - - - - - - - otoraplin [Source:NCBI gene;Acc:395484]
31. ADAP1 ENSGALG00000003819 13 1 - - - - 1.000 - - - - - ArfGAP with dual PH domains 1 [Source:HGNC Symbol;Acc:HGNC:16486]
32. FAM46C 13 1 - - - - - 1.000 - - - - family with sequence similarity 46 member C
33. TRPM1 ENSGALG00000003849 5 1 - - - - - 1.000 - - - - transient receptor potential cation channel subfamily M member 1 [Source:HGNC Symbol;Acc:HGNC:7146]
34. HRG ENSGALG00000008646 1 1 - - 1.000 - - - - - - - histidine rich glycoprotein [Source:HGNC Symbol;Acc:HGNC:5181]
35. SCNN1B ENSGALG00000006202 87 1 - - - - - - - 1.000 - - sodium channel epithelial 1 beta subunit [Source:HGNC Symbol;Acc:HGNC:10600]
36. NR5A1 ENSGALG00000001080 141 1 - - - - - - - 1.000 - - nuclear receptor subfamily 5 group A member 1 [Source:NCBI gene;Acc:395960]
37. TESK2 ENSGALG00000010230 9 1 - - - - 1.000 - - - - - testis associated actin remodelling kinase 2 [Source:HGNC Symbol;Acc:HGNC:11732]
38. PTPRB ENSGALG00000010049 15 1 - - - - - - - 1.000 - - protein tyrosine phosphatase, receptor type B [Source:HGNC Symbol;Acc:HGNC:9665]
39. HIAT1 HIAT1 447 1 - - - - - 1.000 - - - -
40. uc_6 uc_6 14 1 - - - - - - - 1.000 - -
41. ONECUT3 ENSGALG00000028081 1 1 - - - - - 1.000 - - - - one cut homeobox 3 [Source:HGNC Symbol;Acc:HGNC:13399]
42. EMID1 4 1 - - - - 1.000 - - - - - EMI domain containing 1, transcript variant X5
43. PSCA ENSGALG00000045875 5 1 - - 1.000 - - - - - - - prostate stem cell antigen [Source:HGNC Symbol;Acc:HGNC:9500]
44. TRPV2 ENSGALG00000004519 7 1 - - - - - - - 1.000 - - transient receptor potential cation channel subfamily V member 2 [Source:HGNC Symbol;Acc:HGNC:18082]
45. CASZ1 ENSGALG00000002888 2 1 - - - - - 1.000 - - - - castor zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:26002]
46. POMT2 ENSGALG00000041962 1 1 - - - - 1.000 - - - - - protein O-mannosyltransferase 2, transcript variant X7
47. AKAP11 ENSGALG00000022739 82 1 - - - - 1.000 - - - - - A-kinase anchoring protein 11 [Source:HGNC Symbol;Acc:HGNC:369]
48. HDC ENSGALG00000023436 3 1 - - - - 1.000 - - - - - histidine decarboxylase [Source:NCBI gene;Acc:415454]
49. ENSGALG00000023638 ENSGALG00000023638 16 1 - - - - - 1.000 - - - -
50. DAPK1 ENSGALG00000012608 17 1 - - - - - 1.000 - - - - death-associated protein kinase 1 [Source:NCBI gene;Acc:431670]
51. H2AFX ENSGALG00000045705 7 1 - - - - - - - 1.000 - - H2A histone family member X
52. DAGLA ENSGALG00000036492 3 1 - - - - 1.000 - - - - - diacylglycerol lipase alpha [Source:HGNC Symbol;Acc:HGNC:1165]
53. CCDC28A ENSGALG00000013834 8 1 - - - - - 1.000 - - - - coiled-coil domain containing 28A [Source:HGNC Symbol;Acc:HGNC:21098]
54. TYR ENSGALG00000017237 4 1 - - - - - - - 1.000 - - tyrosinase [Source:NCBI gene;Acc:373971]
55. PITPNA ENSGALG00000023806, ENSGALG00000035005 8 1 - - - - - 1.000 - - - - phosphatidylinositol transfer protein alpha [Source:HGNC Symbol;Acc:HGNC:9001]
56. GRK6 ENSGALG00000014054 6 1 - - 1.000 - - - - - - - G protein-coupled receptor kinase 6 [Source:HGNC Symbol;Acc:HGNC:4545]
57. ACSL6 ENSGALG00000006644 5 1 - - - - 1.000 - - - - - acyl-CoA synthetase long-chain family member 6, transcript variant X3
58. HOXB1 ENSGALG00000013454 9 1 - - - - 1.000 - - - - - homeobox B1 [Source:NCBI gene;Acc:395900]
59. IL17RA ENSGALG00000033887 0 1 - - - - - 1.000 - - - - Gallus gallus interleukin 17 receptor A (IL17RA), mRNA. [Source:RefSeq mRNA;Acc:NM_001318988]
60. SLITRK6 ENSGALG00000016904 30 1 - - - - - - - 1.000 - - SLIT and NTRK like family member 6 [Source:HGNC Symbol;Acc:HGNC:23503]
61. PCDH19 ENSGALG00000006822 13 1 - - - - 1.000 - - - - - protocadherin 19 [Source:NCBI gene;Acc:422263]
62. ADCY1 ENSGALG00000031170 4 1 - - - - 1.000 - - - - - adenylate cyclase 1 [Source:HGNC Symbol;Acc:HGNC:232]
63. ACTL10 ACTL10 3 1 - - 1.000 - - - - - - -
64. TMEM132D ENSGALG00000002671 12 1 - - - - - 1.000 - - - - transmembrane protein 132D, transcript variant X6
65. BTBD6 ENSGALG00000033813 163 1 - - - - - - - 1.000 - - BTB domain containing 6 [Source:HGNC Symbol;Acc:HGNC:19897]
66. GRAP2 ENSGALG00000012056 16 1 - - - - - - - 1.000 - - GRB2-related adaptor protein 2, transcript variant X3
67. NRG3 ENSGALG00000042812 10 1 - - - - - 1.000 - - - - neuregulin 3 [Source:HGNC Symbol;Acc:HGNC:7999]
68. VPS9D1 ENSGALG00000023468 1 1 - - - - - 1.000 - - - - VPS9 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:13526]
69. ENSGALG00000028833 ENSGALG00000028833 0 1 - - - - - 1.000 - - - -
70. TSNAXIP1 ENSGALG00000001533 9 1 - - - - 1.000 - - - - - translin associated factor X interacting protein 1, transcript variant X2
71. ALC ENSGALG00000040392 282 1 - - - - - - - 1.000 - - ALC protein [Source:NCBI gene;Acc:395084]
72. TMEM161B ENSGALG00000010896 36 1 - - - - - 1.000 - - - - transmembrane protein 161B [Source:HGNC Symbol;Acc:HGNC:28483]
73. B4GALT2 ENSGALG00000010094 36 1 - - - - - - - 1.000 - - beta-1,4-galactosyltransferase 2 [Source:NCBI gene;Acc:396122]
74. ALK 2 1 - - - - - 1.000 - - - - anaplastic lymphoma receptor tyrosine kinase, transcript variant X3
75. RNFT2 ENSGALG00000008217 0 1 - - - - - 1.000 - - - - ring finger protein, transmembrane 2 [Source:HGNC Symbol;Acc:HGNC:25905]
76. STAG3 STAG3 34 1 - - - - - - - 1.000 - -
77. ENSGALG00000004223 ENSGALG00000004223 7 1 - - - - - - - 1.000 - -
78. C14orf166B C14orf166B 4 1 - - - - - - - 1.000 - -
79. SCN1A ENSGALG00000010943 6 1 - - - - 1.000 - - - - - sodium voltage-gated channel alpha subunit 1 [Source:HGNC Symbol;Acc:HGNC:10585]
80. GPR22 ENSGALG00000008032 5 1 - - - - 1.000 - - - - - G protein-coupled receptor 22, transcript variant X1
81. ENSGALG00000009237 ENSGALG00000009237 3 1 - - 1.000 - - - - - - -
82. CCDC67 CCDC67 3 1 - - 1.000 - - - - - - -
83. LAMP3 ENSGALG00000008759 2 1 - - 1.000 - - - - - - - lysosomal associated membrane protein 3 [Source:NCBI gene;Acc:424961]
84. FNIP1 ENSGALG00000017462 4 1 - - - - - 1.000 - - - - folliculin interacting protein 1 [Source:NCBI gene;Acc:427642]
85. GRM5 ENSGALG00000017238 2 1 - - - - - 1.000 - - - - glutamate receptor, metabotropic 5 [Source:NCBI gene;Acc:373933]
86. CRYAA ENSGALG00000016199 12 1 - - - - - - - 1.000 - - crystallin alpha A [Source:NCBI gene;Acc:418546]
87. NIPAL1 ENSGALG00000027986 11 1 - - 1.000 - - - - - - - NIPA like domain containing 1 [Source:HGNC Symbol;Acc:HGNC:27194]
88. CRK ENSGALG00000002656 15 1 - - - - 1.000 - - - - - CRK proto-oncogene, adaptor protein [Source:NCBI gene;Acc:107054794]
89. SLC25A25 ENSGALG00000005095 4 1 - - - - 1.000 - - - - - solute carrier family 25 member 25 [Source:HGNC Symbol;Acc:HGNC:20663]
90. MST1R ENSGALG00000003103 11 1 - - - - - - - 1.000 - - macrophage stimulating 1 receptor [Source:NCBI gene;Acc:427573]
91. LOC100858814 ENSGALG00000028210 3 1 - - - - - - - 1.000 - - adenine phosphoribosyltransferase-like, transcript variant X1
92. CCDC69 2 1 - - - - - - - 1.000 - - coiled-coil domain containing 69
93. NADSYN1 ENSGALG00000004153 8 1 - - - - - 1.000 - - - - NAD synthetase 1 [Source:NCBI gene;Acc:422983]
94. LAPTM5 ENSGALG00000038636 18 1 - - - - - - - 1.000 - - lysosomal protein transmembrane 5 [Source:HGNC Symbol;Acc:HGNC:29612]
95. BDKRB2 ENSGALG00000011080 12 1 - - 1.000 - - - - - - - bradykinin receptor B2 [Source:NCBI gene;Acc:428906]
96. EPHB6 ENSGALG00000014749 30 1 - - - - 1.000 - - - - - EPH receptor B6 [Source:NCBI gene;Acc:418308]
97. LRRC63 8 1 - - - - - - - 1.000 - - leucine rich repeat containing 63, transcript variant X3
98. ASPR ASPR 1 1 - - - - - 1.000 - - - -
99. TMCC3 ENSGALG00000011320 1 1 - - 1.000 - - - - - - - transmembrane and coiled-coil domain family 3, transcript variant X1
100. CYP19A1 ENSGALG00000013294 0 1 - - - - - - - 1.000 - - cytochrome P450 family 19 subfamily A member 1 [Source:NCBI gene;Acc:414854]

There are 298 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA