Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CHAT

Gene Name Gene ID Reads Annotation
CHAT ENSGALG00000002289 26 choline O-acetyltransferase [Source:NCBI gene;Acc:395314]











Genes with expression patterns similar to CHAT

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CHAT ENSGALG00000002289 26 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 choline O-acetyltransferase [Source:NCBI gene;Acc:395314]
2. CLDN16 ENSGALG00000025821 14 2 - - 1.000 - - 1.000 - - - - claudin 16 [Source:HGNC Symbol;Acc:HGNC:2037]
3. FAT2 ENSGALG00000004320 4 2 - - - - - 1.000 - 1.000 - - FAT atypical cadherin 2 [Source:HGNC Symbol;Acc:HGNC:3596]
4. TEX33 ENSGALG00000012490 11 2 - - - - - 1.000 - 1.000 - - testis expressed 33, transcript variant X2
5. ENSGALG00000028402 ENSGALG00000028402 5 1.987 - - 0.987 - - - - 1.000 - -
6. SNORD100 SNORD100 270 1.97 - - - - 1.000 - - 0.970 - -
7. LRRC32 9 1.957 - - 0.957 - - - - 1.000 - - leucine rich repeat containing 32
8. TNFRSF18 ENSGALG00000001882 12 1.892 - - - - - 0.892 - 1.000 - - TNF receptor superfamily member 18 [Source:NCBI gene;Acc:419424]
9. RAB43 ENSGALG00000005021 5 1.877 - - - - 0.877 1.000 - - - - RAB43, member RAS oncogene family [Source:NCBI gene;Acc:415970]
10. PSEN2 ENSGALG00000009073 7 1.839 - - - - - 1.000 - 0.839 - - presenilin 2 (Alzheimer disease 4) [Source:NCBI gene;Acc:374188]
11. QSOX1 ENSGALG00000003933 184 1.813 - - - - - 1.000 - - - 0.813 quiescin Q6 sulfhydryl oxidase 1 [Source:NCBI gene;Acc:373914]
12. ARL15 ENSGALG00000014911 13 1.801 - - - - 1.000 - - - - 0.801 ADP ribosylation factor like GTPase 15 [Source:HGNC Symbol;Acc:HGNC:25945]
13. FBXL4 ENSGALG00000015490 12 1.787 - - - - 1.000 - - - - 0.787 F-box and leucine rich repeat protein 4 [Source:HGNC Symbol;Acc:HGNC:13601]
14. SNTG2 ENSGALG00000016367 42 1.759 - - - - - - - 0.970 - 0.789 syntrophin gamma 2 [Source:HGNC Symbol;Acc:HGNC:13741]
15. SNORD61 SNORD61 12 1.748 - - 0.748 - - 1.000 - - - -
16. SULT ENSGALG00000011287 62 1.563 - - 0.759 - - 0.804 - - - - sulfotransferase [Source:NCBI gene;Acc:395933]
17. BTBD10 ENSGALG00000005369 56 1 - - - - 1.000 - - - - - BTB domain containing 10 [Source:NCBI gene;Acc:423029]
18. ADAP1 ENSGALG00000003819 13 1 - - - - 1.000 - - - - - ArfGAP with dual PH domains 1 [Source:HGNC Symbol;Acc:HGNC:16486]
19. WDR37 ENSGALG00000006749 44 1 - - - - - 1.000 - - - - WD repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:31406]
20. IAPP ENSGALG00000013168 1 1 - - - - - 1.000 - - - - islet amyloid polypeptide [Source:NCBI gene;Acc:396362]
21. WDR63 ENSGALG00000008696 15 1 - - - - - - - 1.000 - - WD repeat domain 63 [Source:HGNC Symbol;Acc:HGNC:30711]
22. SCNN1B ENSGALG00000006202 87 1 - - - - - - - 1.000 - - sodium channel epithelial 1 beta subunit [Source:HGNC Symbol;Acc:HGNC:10600]
23. PLD5 ENSGALG00000010737 5 1 - - - - 1.000 - - - - - phospholipase D family member 5 [Source:NCBI gene;Acc:421501]
24. GRM5 ENSGALG00000017238 2 1 - - - - - 1.000 - - - - glutamate receptor, metabotropic 5 [Source:NCBI gene;Acc:373933]
25. DCDC2B ENSGALG00000046649 3 1 - - 1.000 - - - - - - - doublecortin domain containing 2B [Source:HGNC Symbol;Acc:HGNC:32576]
26. NT5DC3 ENSGALG00000029746 1 1 - - - - - 1.000 - - - - 5'-nucleotidase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:30826]
27. TRAF2 ENSGALG00000042838 24 1 - - - - 1.000 - - - - - TNF receptor associated factor 2 [Source:HGNC Symbol;Acc:HGNC:12032]
28. LRRTM4 ENSGALG00000000476 0 1 - - - - - - - 1.000 - - leucine rich repeat transmembrane neuronal 4 [Source:HGNC Symbol;Acc:HGNC:19411]
29. C2CD3 ENSGALG00000017314 13 1 - - - - 1.000 - - - - - C2 calcium dependent domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24564]
30. ENSGALG00000021106 ENSGALG00000021106 35 1 - - - - - 1.000 - - - -
31. NR5A1 ENSGALG00000001080 141 1 - - - - - - - 1.000 - - nuclear receptor subfamily 5 group A member 1 [Source:NCBI gene;Acc:395960]
32. ENSGALG00000023704 ENSGALG00000023704 2 1 - - - - - - - 1.000 - -
33. CD5 ENSGALG00000031735 3 1 - - - - - 1.000 - - - - CD5 molecule [Source:NCBI gene;Acc:395757]
34. THAP1 ENSGALG00000015385 15 1 - - - - - - - 1.000 - - THAP domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20856]
35. C14orf166B C14orf166B 4 1 - - - - - - - 1.000 - -
36. PLEKHM2 ENSGALG00000003439 44 1 - - - - - - - 1.000 - - pleckstrin homology and RUN domain containing M2 [Source:HGNC Symbol;Acc:HGNC:29131]
37. PASD1 ENSGALG00000009063 0 1 - - - - - 1.000 - - - - PAS domain containing repressor 1, transcript variant X4
38. ZAP70 ENSGALG00000001486 2 1 - - 1.000 - - - - - - - Gallus gallus zeta-chain (TCR) associated protein kinase 70kDa (ZAP70), mRNA. [Source:RefSeq mRNA;Acc:NM_001321556]
39. CNNM1 ENSGALG00000007489 43 1 - - - - - 1.000 - - - - cyclin and CBS domain divalent metal cation transport mediator 1 [Source:HGNC Symbol;Acc:HGNC:102]
40. APOLD1 ENSGALG00000011784 1 1 - - 1.000 - - - - - - - apolipoprotein L domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25268]
41. H2AFX ENSGALG00000045705 7 1 - - - - - - - 1.000 - - H2A histone family member X
42. RXFP1 ENSGALG00000009429 10 1 - - - - 1.000 - - - - - relaxin family peptide receptor 1 [Source:HGNC Symbol;Acc:HGNC:19718]
43. MMP9 ENSGALG00000006992 78 1 - - - - - 1.000 - - - - matrix metallopeptidase 9 [Source:NCBI gene;Acc:395387]
44. APBB1 ENSGALG00000046164 5 1 - - - - - 1.000 - - - - amyloid beta precursor protein binding family B member 1 [Source:HGNC Symbol;Acc:HGNC:581]
45. RECQL5 ENSGALG00000002424 16 1 - - - - - - - 1.000 - - RecQ like helicase 5 [Source:NCBI gene;Acc:373891]
46. ENSGALG00000023695 ENSGALG00000023695 2 1 - - 1.000 - - - - - - -
47. ADCY1 ENSGALG00000031170 4 1 - - - - 1.000 - - - - - adenylate cyclase 1 [Source:HGNC Symbol;Acc:HGNC:232]
48. CDHR4 2 1 - - - - 1.000 - - - - - cadherin related family member 4
49. GZMA ENSGALG00000013548 22 1 - - - - - 1.000 - - - - granzyme A [Source:NCBI gene;Acc:395108]
50. TRPV2 ENSGALG00000004519 7 1 - - - - - - - 1.000 - - transient receptor potential cation channel subfamily V member 2 [Source:HGNC Symbol;Acc:HGNC:18082]
51. ACTL10 ACTL10 3 1 - - 1.000 - - - - - - -
52. THBD ENSGALG00000044442 6 1 - - - - - 1.000 - - - - thrombomodulin
53. ABCA4 ENSGALG00000005752 15 1 - - 1.000 - - - - - - - ATP binding cassette subfamily A member 4 [Source:HGNC Symbol;Acc:HGNC:34]
54. CYP19A1 ENSGALG00000013294 0 1 - - - - - - - 1.000 - - cytochrome P450 family 19 subfamily A member 1 [Source:NCBI gene;Acc:414854]
55. HEPACAM2 ENSGALG00000009482 3 1 - - - - 1.000 - - - - - HEPACAM family member 2 [Source:HGNC Symbol;Acc:HGNC:27364]
56. LOC100858814 ENSGALG00000028210 3 1 - - - - - - - 1.000 - - adenine phosphoribosyltransferase-like, transcript variant X1
57. IFNG ENSGALG00000009903 5 1 - - - - - - - 1.000 - - interferon gamma [Source:NCBI gene;Acc:396054]
58. ALK 2 1 - - - - - 1.000 - - - - anaplastic lymphoma receptor tyrosine kinase, transcript variant X3
59. ENSGALG00000027400 ENSGALG00000027400 2 1 - - - - - - - 1.000 - -
60. ALC ENSGALG00000040392 282 1 - - - - - - - 1.000 - - ALC protein [Source:NCBI gene;Acc:395084]
61. DYNC1LI2 ENSGALG00000005241 25 1 - - - - - - - 1.000 - - dynein cytoplasmic 1 light intermediate chain 2 [Source:NCBI gene;Acc:415793]
62. ENSGALG00000023869 ENSGALG00000023869 1 1 - - 1.000 - - - - - - -
63. B4GALT2 ENSGALG00000010094 36 1 - - - - - - - 1.000 - - beta-1,4-galactosyltransferase 2 [Source:NCBI gene;Acc:396122]
64. GDPGP1 ENSGALG00000045045 2 1 - - - - - 1.000 - - - - GDP-D-glucose phosphorylase 1
65. MFHAS1 ENSGALG00000011444 7 1 - - - - - 1.000 - - - - malignant fibrous histiocytoma amplified sequence 1 [Source:HGNC Symbol;Acc:HGNC:16982]
66. XDH ENSGALG00000008701 10 1 - - - - 1.000 - - - - - xanthine dehydrogenase [Source:NCBI gene;Acc:396025]
67. ENSGALG00000023027 ENSGALG00000023027 5 1 - - 1.000 - - - - - - -
68. PI4KB ENSGALG00000024034 31 1 - - - - - - - 1.000 - - phosphatidylinositol 4-kinase beta [Source:HGNC Symbol;Acc:HGNC:8984]
69. ENSGALG00000028156 ENSGALG00000028156 1 1 - - 1.000 - - - - - - -
70. CRCBL ENSGALG00000025881 3 1 - - - - - 1.000 - - - - cytokine receptor common subunit beta-like, transcript variant X3
71. BRINP2 ENSGALG00000004448 26 1 - - - - 1.000 - - - - - BMP/retinoic acid inducible neural specific 2 [Source:HGNC Symbol;Acc:HGNC:13746]
72. TRPM1 ENSGALG00000003849 5 1 - - - - - 1.000 - - - - transient receptor potential cation channel subfamily M member 1 [Source:HGNC Symbol;Acc:HGNC:7146]
73. ENSGALG00000004223 ENSGALG00000004223 7 1 - - - - - - - 1.000 - -
74. TESK2 ENSGALG00000010230 9 1 - - - - 1.000 - - - - - testis associated actin remodelling kinase 2 [Source:HGNC Symbol;Acc:HGNC:11732]
75. ST8SIA5 ENSGALG00000035927 4 1 - - 1.000 - - - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:NCBI gene;Acc:414797]
76. TMEM132D ENSGALG00000002671 12 1 - - - - - 1.000 - - - - transmembrane protein 132D, transcript variant X6
77. LOC422320 ENSGALG00000007703 6 1 - - - - - 1.000 - - - - ligand of Numb protein X 2-like, transcript variant X1
78. FAM46C 13 1 - - - - - 1.000 - - - - family with sequence similarity 46 member C
79. NFATC3 ENSGALG00000003396 40 1 - - - - - 1.000 - - - - nuclear factor of activated T cells 3 [Source:HGNC Symbol;Acc:HGNC:7777]
80. TLL2 ENSGALG00000005519 10 1 - - - - - 1.000 - - - - tolloid like 2 [Source:HGNC Symbol;Acc:HGNC:11844]
81. SCN1A ENSGALG00000010943 6 1 - - - - 1.000 - - - - - sodium voltage-gated channel alpha subunit 1 [Source:HGNC Symbol;Acc:HGNC:10585]
82. STAG3 STAG3 34 1 - - - - - - - 1.000 - -
83. MINPP1 ENSGALG00000003695 1 1 - - - - - - - 1.000 - - multiple inositol-polyphosphate phosphatase 1 [Source:NCBI gene;Acc:395356]
84. UNC45B ENSGALG00000002186 399 1 - - - - - - - 1.000 - - unc-45 myosin chaperone B [Source:HGNC Symbol;Acc:HGNC:14304]
85. OTOR ENSGALG00000008732 10 1 - - 1.000 - - - - - - - otoraplin [Source:NCBI gene;Acc:395484]
86. TMEM161B ENSGALG00000010896 36 1 - - - - - 1.000 - - - - transmembrane protein 161B [Source:HGNC Symbol;Acc:HGNC:28483]
87. EPHB6 ENSGALG00000014749 30 1 - - - - 1.000 - - - - - EPH receptor B6 [Source:NCBI gene;Acc:418308]
88. CCDC69 2 1 - - - - - - - 1.000 - - coiled-coil domain containing 69
89. EML5 ENSGALG00000010639 25 1 - - - - - - - 1.000 - - echinoderm microtubule associated protein like 5, transcript variant X1
90. PITPNA ENSGALG00000023806, ENSGALG00000035005 8 1 - - - - - 1.000 - - - - phosphatidylinositol transfer protein alpha [Source:HGNC Symbol;Acc:HGNC:9001]
91. IL17RA ENSGALG00000033887 0 1 - - - - - 1.000 - - - - Gallus gallus interleukin 17 receptor A (IL17RA), mRNA. [Source:RefSeq mRNA;Acc:NM_001318988]
92. FSTL1 ENSGALG00000014970 25 1 - - - - 1.000 - - - - - follistatin like 1 [Source:NCBI gene;Acc:395349]
93. CASZ1 ENSGALG00000002888 2 1 - - - - - 1.000 - - - - castor zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:26002]
94. A1CF ENSGALG00000003765 36 1 - - 1.000 - - - - - - - APOBEC1 complementation factor [Source:HGNC Symbol;Acc:HGNC:24086]
95. MST1R ENSGALG00000003103 11 1 - - - - - - - 1.000 - - macrophage stimulating 1 receptor [Source:NCBI gene;Acc:427573]
96. TRHDE ENSGALG00000010200 4 1 - - - - 1.000 - - - - - thyrotropin releasing hormone degrading enzyme [Source:HGNC Symbol;Acc:HGNC:30748]
97. C12orf50 ENSGALG00000045093 9 1 - - - - - 1.000 - - - - chromosome 12 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:26665]
98. PCDH19 ENSGALG00000006822 13 1 - - - - 1.000 - - - - - protocadherin 19 [Source:NCBI gene;Acc:422263]
99. BDKRB2 ENSGALG00000011080 12 1 - - 1.000 - - - - - - - bradykinin receptor B2 [Source:NCBI gene;Acc:428906]
100. SYTL2L ENSGALG00000008326 5 1 - - - - 1.000 - - - - - synaptotagmin-like protein 2-like, transcript variant X4

There are 298 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA