Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for CHANK3

Gene Name Gene ID Reads Annotation
CHANK3 CHANK3 218











Genes with expression patterns similar to CHANK3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CHANK3 CHANK3 218 8 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. RNF168 ENSGALG00000006392 507 0.858 - - - - - - - - - 0.858 ring finger protein 168 [Source:HGNC Symbol;Acc:HGNC:26661]
3. LOC428824 ENSGALG00000004393 358 0.844 - - - - - - - - 0.844 - SITS-binding protein-like, transcript variant X1
4. TMTC4 ENSGALG00000016870 40 0.838 - - - - - - - 0.838 - - transmembrane and tetratricopeptide repeat containing 4 [Source:HGNC Symbol;Acc:HGNC:25904]
5. gga-mir-1652 ENSGALG00000025444 119 0.831 - - - - - - - 0.831 - - gga-mir-1652 [Source:miRBase;Acc:MI0007384]
6. AKAP11 ENSGALG00000022739 82 0.831 - - - - - - - 0.831 - - A-kinase anchoring protein 11 [Source:HGNC Symbol;Acc:HGNC:369]
7. GINS4 ENSGALG00000045374 870 0.829 - - - - - - - - - 0.829 Gallus gallus GINS complex subunit 4 (Sld5 homolog) (GINS4), mRNA. [Source:RefSeq mRNA;Acc:NM_001354864]
8. EARS2 ENSGALG00000006122 2072 0.827 - - - - - - - - 0.827 - glutamyl-tRNA synthetase 2, mitochondrial [Source:NCBI gene;Acc:427672]
9. LCT ENSGALG00000012260 21 0.822 - - - - - - - 0.822 - - lactase [Source:NCBI gene;Acc:424294]
10. ASXL1 ENSGALG00000006612 273 0.821 - - - - - - - - - 0.821 ASXL transcriptional regulator 1 [Source:HGNC Symbol;Acc:HGNC:18318]
11. MCM9 ENSGALG00000014883 8 0.817 - - - - - - - 0.817 - - minichromosome maintenance 9 homologous recombination repair factor [Source:NCBI gene;Acc:100857742]
12. RPS6KA6 ENSGALG00000007097 94 0.817 - - - - - - - 0.817 - - ribosomal protein S6 kinase A6 [Source:HGNC Symbol;Acc:HGNC:10435]
13. SNX25 ENSGALG00000010610 31 0.817 - - - - - - - 0.817 - - sorting nexin 25 [Source:HGNC Symbol;Acc:HGNC:21883]
14. FGA ENSGALG00000009266 291 0.817 - - - - - - - 0.817 - - fibrinogen alpha chain [Source:NCBI gene;Acc:396307]
15. AK8 ENSGALG00000040923 10 0.817 - - - - - - - 0.817 - - adenylate kinase 8, transcript variant X1
16. ALDH6A1 ENSGALG00000010211 29 0.817 - - - - - - - 0.817 - - aldehyde dehydrogenase 6 family member A1 [Source:HGNC Symbol;Acc:HGNC:7179]
17. BOK ENSGALG00000005772 117 0.817 - - - - - - - 0.817 - - BOK, BCL2 family apoptosis regulator [Source:NCBI gene;Acc:395445]
18. SMAP2 ENSGALG00000029244 498 0.817 - - - - - - - 0.817 - - small ArfGAP2 [Source:NCBI gene;Acc:419641]
19. MEST ENSGALG00000008111 1 0.817 - - - - - - - 0.817 - - mesoderm specific transcript [Source:HGNC Symbol;Acc:HGNC:7028]
20. TTLL2 ENSGALG00000011344 14 0.817 - - - - - - - 0.817 - - tubulin tyrosine ligase like 2, transcript variant X1
21. PARP12 ENSGALG00000046187 10 0.817 - - - - - - - 0.817 - - poly(ADP-ribose) polymerase family member 12 [Source:HGNC Symbol;Acc:HGNC:21919]
22. STARD13 ENSGALG00000017065 18 0.817 - - - - - - - 0.817 - - StAR related lipid transfer domain containing 13, transcript variant X3
23. ATP10D ENSGALG00000014192 94 0.817 - - - - - - - - - 0.817 ATPase phospholipid transporting 10D (putative) [Source:HGNC Symbol;Acc:HGNC:13549]
24. AK7 ENSGALG00000011093 9 0.817 - - - - - - - 0.817 - - adenylate kinase 7 [Source:HGNC Symbol;Acc:HGNC:20091]
25. SEC16A ENSGALG00000002364 19 0.817 - - - - - - - 0.817 - - SEC16 homolog A, endoplasmic reticulum export factor, transcript variant X1
26. TFRC 31 0.817 - - - - - - - 0.817 - - transferrin receptor, transcript variant X1
27. FBXO16 7 0.817 - - - - - - - 0.817 - - F-box protein 16, transcript variant X1
28. PALM ENSGALG00000026055 8 0.817 - - - - - - - 0.817 - - paralemmin [Source:NCBI gene;Acc:101750199]
29. ASB12 ENSGALG00000007594 185 0.817 - - - - - - - 0.817 - - ankyrin repeat and SOCS box containing 12 [Source:NCBI gene;Acc:422313]
30. TMEM255A ENSGALG00000008604 7 0.816 - - - - - - - 0.816 - - transmembrane protein 255A [Source:HGNC Symbol;Acc:HGNC:26086]
31. NTRK1 ENSGALG00000019019 17 0.816 - - - - - - - 0.816 - - neurotrophic receptor tyrosine kinase 1 [Source:NCBI gene;Acc:396337]
32. TRIM14 ENSGALG00000015315 22 0.816 - - - - - - - 0.816 - - tripartite motif containing 14 [Source:NCBI gene;Acc:427282]
33. IL13RA1 ENSGALG00000044480 24 0.816 - - - - - - - 0.816 - - interleukin 13 receptor subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:5974]
34. WDR16 WDR16 22 0.816 - - - - - - - 0.816 - -
35. RELN ENSGALG00000008193 43 0.816 - - - - - - - 0.816 - - reelin [Source:NCBI gene;Acc:427850]
36. ARSA ENSGALG00000035824 299 0.813 - - - - - - - 0.813 - - arylsulfatase A [Source:HGNC Symbol;Acc:HGNC:713]
37. KCNQ5 ENSGALG00000037249 321 0.812 - - - - - - - - - 0.812 potassium voltage-gated channel subfamily Q member 5 [Source:HGNC Symbol;Acc:HGNC:6299]
38. E2F6 ENSGALG00000016454 4747 0.81 - - - - - - - - 0.810 - E2F transcription factor 6 [Source:NCBI gene;Acc:421943]
39. TROJANZ ENSGALG00000027747 37 0.809 - - - - - - - 0.809 - - Gallus gallus phosphotyrosine phosphatase kappa-like-Z (TROJANZ), mRNA. [Source:RefSeq mRNA;Acc:NM_001318459]
40. PACSIN1 ENSGALG00000002802 6 0.809 - - - - - - - 0.809 - - protein kinase C and casein kinase substrate in neurons 1 [Source:HGNC Symbol;Acc:HGNC:8570]
41. CGNL1 ENSGALG00000004294 1177 0.806 - - - - - 0.806 - - - - cingulin like 1 [Source:HGNC Symbol;Acc:HGNC:25931]
42. SGK196 SGK196 83 0.805 - - - - - - - - 0.805 -
43. MYO1E ENSGALG00000004150 40 0.798 - - - - - - - 0.798 - - myosin IE [Source:HGNC Symbol;Acc:HGNC:7599]
44. MEGF10 ENSGALG00000014699 248 0.791 - - - - - - - - 0.791 - multiple EGF like domains 10 [Source:HGNC Symbol;Acc:HGNC:29634]
45. PCGF3 ENSGALG00000015333 7 0.787 - - 0.787 - - - - - - - polycomb group ring finger 3 [Source:HGNC Symbol;Acc:HGNC:10066]
46. TRAFD1 ENSGALG00000043208 1009 0.787 - - - - - - - - 0.787 - TRAF-type zinc finger domain containing 1 [Source:NCBI gene;Acc:416884]
47. WAPAL WAPAL 625 0.786 - - - - - - - - - 0.786
48. MPZL1 ENSGALG00000015438 72 0.781 - - - - - - - 0.781 - - myelin protein zero like 1 [Source:HGNC Symbol;Acc:HGNC:7226]
49. RUNX2 ENSGALG00000040276 499 0.78 - - - - - - - - - 0.780 runt related transcription factor 2 [Source:NCBI gene;Acc:373919]
50. APOOL ENSGALG00000006978 1953 0.777 - - - - - - - - 0.777 - apolipoprotein O like [Source:NCBI gene;Acc:422271]
51. KIAA1377 KIAA1377 48 0.773 - - - - - - - - 0.773 -
52. TEKT4 ENSGALG00000005247 20 0.768 - - - - - - - 0.768 - - tektin 4 [Source:HGNC Symbol;Acc:HGNC:31012]
53. TDP1 ENSGALG00000010669 57 0.768 - - - - - - - 0.768 - - tyrosyl-DNA phosphodiesterase 1 [Source:HGNC Symbol;Acc:HGNC:18884]
54. ENSGALG00000023180 ENSGALG00000023180 83 0.768 - - - - - - - 0.768 - -
55. ZFYVE26 ENSGALG00000028762 18 0.768 - - - - - - - 0.768 - - zinc finger FYVE-type containing 26 [Source:HGNC Symbol;Acc:HGNC:20761]
56. GPR126 GPR126 661 0.766 - - - - - - - - 0.766 -
57. ARMC2 ENSGALG00000015289 18 0.763 - - - - - - - 0.763 - - armadillo repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:23045]
58. GABBR2 ENSGALG00000013200 176 0.763 - - - - - - - 0.763 - - gamma-aminobutyric acid type B receptor subunit 2 [Source:HGNC Symbol;Acc:HGNC:4507]
59. SLC35B2 ENSGALG00000010174 3 0.763 - - - - - - - 0.763 - - solute carrier family 35 member B2 [Source:HGNC Symbol;Acc:HGNC:16872]
60. CA12 ENSGALG00000003456 62 0.761 - - - - - - - 0.761 - - carbonic anhydrase 12 [Source:HGNC Symbol;Acc:HGNC:1371]
61. RDH11 ENSGALG00000009538 110 0.761 - - - - - - - 0.761 - - retinol dehydrogenase 11 [Source:HGNC Symbol;Acc:HGNC:17964]
62. KLF4 ENSGALG00000026928 184 0.756 - - - - - - - - 0.756 - Kruppel like factor 4 [Source:HGNC Symbol;Acc:HGNC:6348]
63. ALDOB ENSGALG00000015544 584 0.756 - - - - - 0.756 - - - - aldolase, fructose-bisphosphate B [Source:NCBI gene;Acc:427308]
64. ARL8A_1 ENSGALG00000000606 23 0.754 - - - - - - - 0.754 - - ADP ribosylation factor like GTPase 8A [Source:NCBI gene;Acc:421175]
65. RAB11FIP4 ENSGALG00000003227 62 0.753 - - - - - - 0.753 - - - RAB11 family interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:30267]
66. MAF ENSGALG00000026258 45 0.752 - - - - - - - - 0.752 - MAF bZIP transcription factor [Source:NCBI gene;Acc:693248]
67. PGAM1 ENSGALG00000007606 384 0.752 - - - - - - - - 0.752 - phosphoglycerate mutase 1 [Source:NCBI gene;Acc:428969]
68. AAGAB ENSGALG00000007887 142 0.752 - - - - - - - 0.752 - - alpha- and gamma-adaptin binding protein [Source:NCBI gene;Acc:415553]
69. STAT1 ENSGALG00000007651 24 0.75 - - - - - - - 0.750 - - signal transducer and activator of transcription 1 [Source:NCBI gene;Acc:424044]
70. DNAH12 ENSGALG00000005601 80 0.75 - - - - - - - - 0.750 - dynein, axonemal, heavy chain 12, transcript variant X6
71. HEMGN ENSGALG00000045740 8 0.749 - - - - - - - 0.749 - - hemogen, transcript variant X1
72. MTBP ENSGALG00000031524 1680 0.746 - - - - - - - - 0.746 - MDM2 binding protein [Source:HGNC Symbol;Acc:HGNC:7417]
73. TPP1 52 0.745 - - 0.745 - - - - - - - tripeptidyl peptidase 1
74. RAB19 ENSGALG00000012850 155 0.745 - - 0.745 - - - - - - - RAB19, member RAS oncogene family [Source:NCBI gene;Acc:418113]
75. CDCA2 ENSGALG00000045842 2236 0.745 - - - - - - - - 0.745 - cell division cycle associated 2, transcript variant X3
76. BRINP3 ENSGALG00000033407 40 0.745 - - - - - - - 0.745 - - BMP/retinoic acid inducible neural specific 3 [Source:HGNC Symbol;Acc:HGNC:22393]
77. STK32B ENSGALG00000029510 95 0.744 - - - - - - - 0.744 - - serine/threonine kinase 32B [Source:HGNC Symbol;Acc:HGNC:14217]
78. NSUN2 ENSGALG00000013064 2005 0.743 - - - - - - - - 0.743 - NOP2/Sun RNA methyltransferase family member 2 [Source:NCBI gene;Acc:420938]
79. ENSGALG00000027205 ENSGALG00000027205 149 0.742 - - - - - - - 0.742 - -
80. TRIM35 ENSGALG00000016595 357 0.742 - - - - - - - - 0.742 - tripartite motif containing 35 [Source:HGNC Symbol;Acc:HGNC:16285]
81. ELMOD2 ENSGALG00000009836 177 0.74 - - - - - - - - - 0.740 ELMO domain containing 2 [Source:NCBI gene;Acc:422449]
82. NPHS2 ENSGALG00000004163 850 0.739 - - - - - - - 0.739 - - NPHS2, podocin [Source:HGNC Symbol;Acc:HGNC:13394]
83. PTPDC1 ENSGALG00000005128 529 0.738 - - - - - - - - 0.738 - protein tyrosine phosphatase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30184]
84. SMEK1 SMEK1 95 0.738 - - - - - - - 0.738 - -
85. JPH3 ENSGALG00000029424 65 0.737 - - - - - - 0.737 - - - junctophilin 3 [Source:HGNC Symbol;Acc:HGNC:14203]
86. KIAA1211 ENSGALG00000013771 135 0.736 - - - - - - - 0.736 - - KIAA1211 [Source:HGNC Symbol;Acc:HGNC:29219]
87. RASEF ENSGALG00000012576 155 0.735 - - - - - - - 0.735 - - RAS and EF-hand domain containing [Source:HGNC Symbol;Acc:HGNC:26464]
88. TMCC2 ENSGALG00000034281 3458 0.733 - - - - - - - - 0.733 - transmembrane and coiled-coil domain family 2 [Source:HGNC Symbol;Acc:HGNC:24239]
89. CRY2 ENSGALG00000008436 1732 0.733 - - - - - - - - 0.733 - cryptochrome circadian regulator 2 [Source:NCBI gene;Acc:374092]
90. ZNF770 ENSGALG00000009817 27 0.732 - - - - - - - - - 0.732 zinc finger protein 770 [Source:HGNC Symbol;Acc:HGNC:26061]
91. LRRC49 ENSGALG00000004059 29 0.731 - - - - - - - - - 0.731 leucine rich repeat containing 49 [Source:HGNC Symbol;Acc:HGNC:25965]
92. BACH1 ENSGALG00000015828 114 0.73 - - - - - - - - - 0.730 BTB domain and CNC homolog 1 [Source:HGNC Symbol;Acc:HGNC:935]
93. ENSGALG00000019943 ENSGALG00000019943 6 0.73 - - 0.730 - - - - - - -
94. SNORA17 SNORA17 39 0.729 - - - - - - - 0.729 - -
95. SLC45A2 ENSGALG00000003310 55 0.729 - - - - - - - - - 0.729 solute carrier family 45 member 2 [Source:NCBI gene;Acc:431665]
96. PPTC7 ENSGALG00000004550 154 0.729 - - - - - - - - - 0.729 PTC7 protein phosphatase homolog [Source:HGNC Symbol;Acc:HGNC:30695]
97. CLCA2 8 0.729 - - - - - - - 0.729 - - chloride channel accessory 2, transcript variant X1
98. RPP30 ENSGALG00000006486 1767 0.728 - - - - - - - - 0.728 - ribonuclease P/MRP subunit p30 [Source:HGNC Symbol;Acc:HGNC:17688]
99. ADK ENSGALG00000005057 199 0.728 - - - - - - - - 0.728 - adenosine kinase [Source:NCBI gene;Acc:423735]
100. DOK5 ENSGALG00000007786 1732 0.721 - - - - - - - - 0.721 - docking protein 5 [Source:HGNC Symbol;Acc:HGNC:16173]

There are 35 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA