Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CHAMP1

Gene Name Gene ID Reads Annotation
CHAMP1 ENSGALG00000016813 508 chromosome alignment maintaining phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:20311]











Genes with expression patterns similar to CHAMP1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CHAMP1 ENSGALG00000016813 508 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 chromosome alignment maintaining phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:20311]
2. ZDHHC7 ENSGALG00000042522 1774 2.5 - - 0.938 0.787 - - - - 0.775 - zinc finger DHHC-type containing 7 [Source:HGNC Symbol;Acc:HGNC:18459]
3. RBBP8 ENSGALG00000014982 3255 2.452 - - 0.898 0.733 - - - - 0.821 - RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]
4. LRRC71 ENSGALG00000027351 695 1.909 - - 0.990 - - - - - 0.919 - leucine rich repeat containing 71 [Source:HGNC Symbol;Acc:HGNC:26556]
5. MIB1 ENSGALG00000014974 3583 1.784 - - 0.964 - - - - - 0.820 - mindbomb E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21086]
6. SMOC2 ENSGALG00000011205 340 1.781 - - 0.968 0.813 - - - - - - SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
7. DCP1B 1306 1.781 - - 0.952 - - - - - 0.829 - decapping mRNA 1B
8. MTHFSD ENSGALG00000033322 824 1.762 - - 0.955 0.807 - - - - - - methenyltetrahydrofolate synthetase domain containing [Source:HGNC Symbol;Acc:HGNC:25778]
9. YBX3 ENSGALG00000031890 819 1.748 - - 0.957 - - - - - 0.791 - Y-box binding protein 3 [Source:NCBI gene;Acc:396371]
10. CLEC16A ENSGALG00000007167 66 1.746 - - 0.991 - - - - 0.755 - - C-type lectin domain containing 16A [Source:HGNC Symbol;Acc:HGNC:29013]
11. HOXB5 ENSGALG00000034907 3646 1.74 - - 0.913 - - - - - 0.827 - homeobox B5 [Source:NCBI gene;Acc:425096]
12. SPG11 ENSGALG00000008180 1890 1.738 - - 0.878 0.860 - - - - - - SPG11, spatacsin vesicle trafficking associated [Source:HGNC Symbol;Acc:HGNC:11226]
13. RALGAPA2 240 1.736 - - 0.959 - - - - - 0.777 - Ral GTPase activating protein, alpha subunit 2 (catalytic), transcript variant X6
14. PGS1 ENSGALG00000007181 3187 1.721 - - 0.835 - - - - - 0.886 - phosphatidylglycerophosphate synthase 1 [Source:NCBI gene;Acc:422087]
15. SLC37A3 ENSGALG00000012849 836 1.685 - - 0.966 - - - - - 0.719 - solute carrier family 37 member 3 [Source:NCBI gene;Acc:418112]
16. FASTKD3 ENSGALG00000033521 1186 1.666 - - - - 0.810 - - - 0.856 - FAST kinase domains 3 [Source:HGNC Symbol;Acc:HGNC:28758]
17. POGZ ENSGALG00000036365 4056 1.632 - - 0.900 - - - - - 0.732 - pogo transposable element with ZNF domain, transcript variant X2
18. TPM4 ENSGALG00000002563 15621 1.63 - - 0.773 - - - - - 0.857 - tropomyosin 4 [Source:HGNC Symbol;Acc:HGNC:12013]
19. ENSGALG00000024266 ENSGALG00000024266 5 1.627 - - - - - - - 0.881 - 0.746
20. ALMS1 ENSGALG00000044620 570 1.625 - - - 0.750 - - - - 0.875 - ALMS1, centrosome and basal body associated protein, transcript variant X1
21. RBX1 ENSGALG00000011993 26090 1.603 - - 0.874 0.729 - - - - - - ring-box 1 [Source:NCBI gene;Acc:418001]
22. TMEM175 ENSGALG00000015368 3342 1.593 - - 0.857 0.736 - - - - - - transmembrane protein 175 [Source:NCBI gene;Acc:427293]
23. NAB1 ENSGALG00000037778 3467 1.574 - - 0.817 - - - - - 0.757 - NGFI-A binding protein 1 [Source:NCBI gene;Acc:374126]
24. WTAP ENSGALG00000011660 10811 1.572 - - 0.871 - - - - - 0.701 - WT1 associated protein [Source:HGNC Symbol;Acc:HGNC:16846]
25. ZCCHC17 ENSGALG00000000618 5163 1.523 - - 0.788 - - - - - 0.735 - zinc finger CCHC-type containing 17 [Source:NCBI gene;Acc:404295]
26. HBXIP HBXIP 8637 1.505 - - 0.735 - - - - - 0.770 -
27. TAF1D ENSGALG00000017220 3012 1.497 - - 0.787 - - - - - 0.710 - TATA-box binding protein associated factor, RNA polymerase I subunit D [Source:HGNC Symbol;Acc:HGNC:28759]
28. TDRD6 48 0.994 - - 0.994 - - - - - - - tudor domain containing 6
29. RQCD1 RQCD1 110 0.994 - - 0.994 - - - - - - -
30. ITGB4 ENSGALG00000002389 44 0.994 - - 0.994 - - - - - - - integrin subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:6158]
31. ENSGALG00000004703 ENSGALG00000004703 112 0.994 - - 0.994 - - - - - - -
32. MRC2 ENSGALG00000000461 48 0.994 - - 0.994 - - - - - - - mannose receptor C type 2 [Source:HGNC Symbol;Acc:HGNC:16875]
33. UEVLD ENSGALG00000006342 164 0.993 - - 0.993 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:NCBI gene;Acc:100858486]
34. MED12 ENSGALG00000036322 814 0.993 - - 0.993 - - - - - - - mediator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:11957]
35. ITM2B ENSGALG00000016996 1112 0.993 - - 0.993 - - - - - - - integral membrane protein 2B [Source:NCBI gene;Acc:395969]
36. ENSGALG00000028964 ENSGALG00000028964 46 0.993 - - 0.993 - - - - - - -
37. ENSGALG00000020103 ENSGALG00000020103 64 0.993 - - 0.993 - - - - - - -
38. SZT2 ENSGALG00000028561 255 0.992 - - 0.992 - - - - - - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
39. ENSGALG00000002020 ENSGALG00000002020 183 0.992 - - 0.992 - - - - - - -
40. SLC3A1 ENSGALG00000009973 608 0.992 - - 0.992 - - - - - - - solute carrier family 3 member 1 [Source:HGNC Symbol;Acc:HGNC:11025]
41. AKAP10 ENSGALG00000004679 103 0.992 - - 0.992 - - - - - - - A-kinase anchoring protein 10 [Source:HGNC Symbol;Acc:HGNC:368]
42. U4 U4 69 0.992 - - 0.992 - - - - - - -
43. F2R ENSGALG00000014983 106 0.992 - - 0.992 - - - - - - - coagulation factor II thrombin receptor [Source:HGNC Symbol;Acc:HGNC:3537]
44. PTDSS2 ENSGALG00000004300 682 0.992 - - 0.992 - - - - - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
45. OSGIN2 ENSGALG00000042840 83 0.992 - - 0.992 - - - - - - - oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]
46. CDC14B ENSGALG00000012627 110 0.992 - - 0.992 - - - - - - - Gallus gallus cell division cycle 14B (CDC14B), mRNA. [Source:RefSeq mRNA;Acc:NM_001318405]
47. ABCC3 ENSGALG00000007522 340 0.991 - - 0.991 - - - - - - - ATP binding cassette subfamily C member 3, transcript variant X5
48. GTF2H2 ENSGALG00000002399 2361 0.991 - - 0.991 - - - - - - - general transcription factor IIH subunit 2, transcript variant X2
49. DBN1 ENSGALG00000033405 216 0.991 - - 0.991 - - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
50. NXPE3 ENSGALG00000015344 111 0.991 - - 0.991 - - - - - - - neurexophilin and PC-esterase domain family member 3 [Source:HGNC Symbol;Acc:HGNC:28238]
51. FBXL5 ENSGALG00000014510 245 0.991 - - 0.991 - - - - - - - F-box and leucine rich repeat protein 5 [Source:HGNC Symbol;Acc:HGNC:13602]
52. SMARCAD1 ENSGALG00000037339 149 0.99 - - 0.990 - - - - - - - SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Source:HGNC Symbol;Acc:HGNC:18398]
53. EPG5 ENSGALG00000036259 71 0.99 - - - - - - - 0.990 - - ectopic P-granules autophagy protein 5 homolog [Source:HGNC Symbol;Acc:HGNC:29331]
54. TCTN2 ENSGALG00000023683 3596 0.99 - - 0.990 - - - - - - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
55. PTPN3 ENSGALG00000022909 6 0.99 - - - - - - - 0.990 - - protein tyrosine phosphatase, non-receptor type 3 [Source:HGNC Symbol;Acc:HGNC:9655]
56. L3MBTL3 ENSGALG00000034030 113 0.99 - - 0.990 - - - - - - - L3MBTL3, histone methyl-lysine binding protein [Source:HGNC Symbol;Acc:HGNC:23035]
57. GDPD4 ENSGALG00000000690 824 0.989 - - 0.989 - - - - - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
58. TRIM13 ENSGALG00000017011 92 0.988 - - 0.988 - - - - - - - tripartite motif containing 13 [Source:HGNC Symbol;Acc:HGNC:9976]
59. MLLT3 ENSGALG00000015078 502 0.988 - - 0.988 - - - - - - - MLLT3, super elongation complex subunit [Source:HGNC Symbol;Acc:HGNC:7136]
60. LRRC42 ENSGALG00000010743 384 0.988 - - 0.988 - - - - - - - leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:HGNC:28792]
61. RPS6KB1 ENSGALG00000005198 169 0.988 - - 0.988 - - - - - - - ribosomal protein S6 kinase B1 [Source:NCBI gene;Acc:417637]
62. RAD54L2 ENSGALG00000003243 187 0.987 - - 0.987 - - - - - - - RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
63. KCTD3 ENSGALG00000009678 335 0.986 - - 0.986 - - - - - - - potassium channel tetramerization domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21305]
64. PRUNE PRUNE 452 0.986 - - 0.986 - - - - - - -
65. BBS5 ENSGALG00000009846 344 0.986 - - 0.986 - - - - - - - Bardet-Biedl syndrome 5 [Source:NCBI gene;Acc:424165]
66. RECQL ENSGALG00000013174 1323 0.986 - - 0.986 - - - - - - - RecQ like helicase [Source:NCBI gene;Acc:378910]
67. FAM134C 860 0.984 - - 0.984 - - - - - - - family with sequence similarity 134 member C
68. TMEM242 ENSGALG00000013689 377 0.984 - - 0.984 - - - - - - - transmembrane protein 242 [Source:HGNC Symbol;Acc:HGNC:17206]
69. IFT81 ENSGALG00000003854 2534 0.984 - - 0.984 - - - - - - - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
70. ATP8B4 ENSGALG00000002326 456 0.981 - - 0.981 - - - - - - - ATPase phospholipid transporting 8B4 (putative), transcript variant X4
71. TUBGCP3 ENSGALG00000016836 332 0.981 - - 0.981 - - - - - - - tubulin gamma complex associated protein 3 [Source:HGNC Symbol;Acc:HGNC:18598]
72. ADK ENSGALG00000005057 199 0.981 - - 0.981 - - - - - - - adenosine kinase [Source:NCBI gene;Acc:423735]
73. BBX ENSGALG00000015353 1281 0.979 - - 0.979 - - - - - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
74. TTPAL ENSGALG00000004244 2734 0.979 - - 0.979 - - - - - - - alpha tocopherol transfer protein like [Source:NCBI gene;Acc:419197]
75. RFK ENSGALG00000033558 1364 0.978 - - 0.978 - - - - - - - riboflavin kinase, transcript variant X3
76. AASDHPPT ENSGALG00000027981 1017 0.978 - - 0.978 - - - - - - - aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Source:NCBI gene;Acc:418975]
77. GFER ENSGALG00000005579 1367 0.977 - - 0.977 - - - - - - - growth factor, augmenter of liver regeneration [Source:HGNC Symbol;Acc:HGNC:4236]
78. PCYT1B 190 0.977 - - 0.977 - - - - - - - phosphate cytidylyltransferase 1, choline, beta, transcript variant X4
79. CEP104 ENSGALG00000000978 1130 0.977 - - 0.977 - - - - - - - centrosomal protein 104 [Source:HGNC Symbol;Acc:HGNC:24866]
80. SOBP ENSGALG00000043047 147 0.976 - - 0.976 - - - - - - - sine oculis binding protein homolog [Source:NCBI gene;Acc:421775]
81. ATF7IP ENSGALG00000011814 1571 0.976 - - 0.976 - - - - - - - activating transcription factor 7 interacting protein [Source:NCBI gene;Acc:417966]
82. ABCE1 ENSGALG00000009961 958 0.976 - - 0.976 - - - - - - - ATP binding cassette subfamily E member 1 [Source:NCBI gene;Acc:422462]
83. PCDH17 ENSGALG00000016941 1006 0.976 - - 0.976 - - - - - - - protocadherin 17 [Source:HGNC Symbol;Acc:HGNC:14267]
84. ENSGALG00000008689 ENSGALG00000008689 232 0.976 - - 0.976 - - - - - - -
85. CHGA ENSGALG00000010820 1028 0.975 - - 0.975 - - - - - - - chromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]
86. WHSC1 1712 0.975 - - 0.975 - - - - - - - Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
87. C18orf8 C18orf8 1512 0.974 - - 0.974 - - - - - - -
88. WDR92 ENSGALG00000008760 3934 0.974 - - 0.974 - - - - - - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
89. NACAD 679 0.974 - - 0.974 - - - - - - - NAC alpha domain containing, transcript variant X1
90. RRN3 ENSGALG00000041989 3934 0.972 - - 0.972 - - - - - - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
91. ATP10D ENSGALG00000014192 94 0.972 - - 0.972 - - - - - - - ATPase phospholipid transporting 10D (putative) [Source:HGNC Symbol;Acc:HGNC:13549]
92. GGT7 ENSGALG00000001062 476 0.97 - - 0.970 - - - - - - - gamma-glutamyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:4259]
93. NGF ENSGALG00000002556 122 0.97 - - 0.970 - - - - - - - nerve growth factor [Source:NCBI gene;Acc:396466]
94. CENPO ENSGALG00000016609 1699 0.969 - - 0.969 - - - - - - - centromere protein O [Source:NCBI gene;Acc:422014]
95. ST6GAL1 ENSGALG00000005550 20 0.968 - - - - - - - 0.968 - - ST6 beta-galactoside alpha-2,6-sialyltransferase 1 [Source:NCBI gene;Acc:396169]
96. SETD1B ENSGALG00000004324 2897 0.968 - - 0.968 - - - - - - - SET domain containing 1B [Source:NCBI gene;Acc:416851]
97. WAPAL WAPAL 625 0.967 - - 0.967 - - - - - - -
98. AKT3 ENSGALG00000034081 866 0.967 - - 0.967 - - - - - - - AKT serine/threonine kinase 3 [Source:HGNC Symbol;Acc:HGNC:393]
99. APTX ENSGALG00000001954 692 0.966 - - 0.966 - - - - - - - aprataxin [Source:NCBI gene;Acc:395173]
100. CA9 ENSGALG00000021340 1431 0.965 - - 0.965 - - - - - - - carbonic anhydrase 9 [Source:HGNC Symbol;Acc:HGNC:1383]

There are 898 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA