Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CFUC-TIX

Gene Name Gene ID Reads Annotation
CFUC-TIX CFUC-TIX 1











Genes with expression patterns similar to CFUC-TIX

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CFUC-TIX CFUC-TIX 1 2 - - - - - 1.000 - - - 1.000
2. SALL3 ENSGALG00000041404 29 1.533 - - - - - 0.789 - - - 0.744 spalt like transcription factor 3 [Source:NCBI gene;Acc:395359]
3. KCNC1 ENSGALG00000006220 15 1 - - - - - 1.000 - - - - potassium voltage-gated channel subfamily C member 1 [Source:HGNC Symbol;Acc:HGNC:6233]
4. gga-let-7i ENSGALG00000018237 2 1 - - - - - 1.000 - - - - gga-let-7i [Source:miRBase;Acc:MI0001168]
5. PPFIA2 ENSGALG00000010958 27 1 - - - - - 1.000 - - - - PTPRF interacting protein alpha 2 [Source:HGNC Symbol;Acc:HGNC:9246]
6. DMP1 ENSGALG00000010927 5 1 - - - - - 1.000 - - - - matrix extracellular phosphoglycoprotein [Source:NCBI gene;Acc:395256]
7. MIP-3ALPHA MIP-3ALPHA 14 1 - - - - - - - - - 1.000
8. AMER3 ENSGALG00000041501 5 1 - - - - - - - - - 1.000 APC membrane recruitment protein 3 [Source:HGNC Symbol;Acc:HGNC:26771]
9. KCNJ16 ENSGALG00000004373 6 1 - - - - - - - - - 1.000 potassium voltage-gated channel subfamily J member 16 [Source:HGNC Symbol;Acc:HGNC:6262]
10. SLCO4C1 ENSGALG00000026768 30 1 - - - - - 1.000 - - - - solute carrier organic anion transporter family member 4C1, transcript variant X4
11. COTL1 ENSGALG00000017644 81 1 - - - - - 1.000 - - - - coactosin like F-actin binding protein 1 [Source:NCBI gene;Acc:768420]
12. ENSGALG00000015321 ENSGALG00000015321 18 1 - - - - - 1.000 - - - -
13. HMX2 ENSGALG00000030875 10 1 - - - - - 1.000 - - - - H6 family homeobox 2 [Source:HGNC Symbol;Acc:HGNC:5018]
14. TTC34 ENSGALG00000001081 8 1 - - - - - 1.000 - - - - tetratricopeptide repeat domain 34 [Source:HGNC Symbol;Acc:HGNC:34297]
15. ATP7B ENSGALG00000017021 7 1 - - - - - 1.000 - - - - ATPase copper transporting beta [Source:HGNC Symbol;Acc:HGNC:870]
16. WNT3 ENSGALG00000001079 8 1 - - - - - - - - - 1.000 Wnt family member 3 [Source:NCBI gene;Acc:374142]
17. LOC100858814 ENSGALG00000028210 3 1 - - - - - 1.000 - - - - adenine phosphoribosyltransferase-like, transcript variant X1
18. STK35 ENSGALG00000036219 0 1 - - - - - 1.000 - - - - serine/threonine kinase 35 [Source:HGNC Symbol;Acc:HGNC:16254]
19. C16orf52 C16orf52 1 1 - - - - - - - - - 1.000
20. STEAP1 ENSGALG00000009006 16 1 - - - - - - - - - 1.000 STEAP family member 1
21. BACE1 ENSGALG00000007298 3 1 - - - - - 1.000 - - - - beta-secretase 1 [Source:HGNC Symbol;Acc:HGNC:933]
22. PIWIL1 ENSGALG00000002645 23 1 - - - - - - - - - 1.000 piwi like RNA-mediated gene silencing 1 [Source:NCBI gene;Acc:416804]
23. BANK1 ENSGALG00000012292 17 1 - - - - - 1.000 - - - - B cell scaffold protein with ankyrin repeats 1 [Source:HGNC Symbol;Acc:HGNC:18233]
24. OSTN ENSGALG00000007226 33 1 - - - - - 1.000 - - - - osteocrin [Source:NCBI gene;Acc:424907]
25. DIET1 DIET1 1 1 - - - - - 1.000 - - - -
26. RYR2 ENSGALG00000010812 95 1 - - - - - - - - - 1.000 ryanodine receptor 2 [Source:HGNC Symbol;Acc:HGNC:10484]
27. TMEM8C ENSGALG00000021520 30 1 - - - - - 1.000 - - - - Gallus gallus transmembrane protein 8C (TMEM8C), mRNA. [Source:RefSeq mRNA;Acc:NM_001318457]
28. ENSGALG00000025801 ENSGALG00000025801 5 1 - - - - - - - - - 1.000
29. ENSGALG00000020349 ENSGALG00000020349 10 1 - - - - - 1.000 - - - -
30. TRH ENSGALG00000008490 16 1 - - - - - 1.000 - - - - thyrotropin releasing hormone [Source:NCBI gene;Acc:414344]
31. TSSK3 4 1 - - - - - 1.000 - - - - testis specific serine kinase 3
32. ST7L ENSGALG00000001538 5 1 - - - - - 1.000 - - - - suppression of tumorigenicity 7 like [Source:NCBI gene;Acc:395331]
33. TOX3 ENSGALG00000034649 54 1 - - - - - 1.000 - - - - TOX high mobility group box family member 3 [Source:NCBI gene;Acc:415724]
34. SLC26A11 ENSGALG00000007018 7 1 - - - - - 1.000 - - - - solute carrier family 26 member 11 [Source:HGNC Symbol;Acc:HGNC:14471]
35. CHRNA1 ENSGALG00000009301 2 1 - - - - - - - - - 1.000 cholinergic receptor nicotinic alpha 1 subunit [Source:NCBI gene;Acc:395608]
36. NOXO1 ENSGALG00000005572 14 1 - - - - - 1.000 - - - - NADPH oxidase organizer 1 [Source:HGNC Symbol;Acc:HGNC:19404]
37. ENSGALG00000028531 ENSGALG00000028531 2 1 - - - - - 1.000 - - - -
38. TP63 ENSGALG00000007324 6 1 - - - - - 1.000 - - - - tumor protein p63 [Source:NCBI gene;Acc:374269]
39. SLC12A1 ENSGALG00000004945 18 1 - - - - - - - - - 1.000 solute carrier family 12 member 1 [Source:HGNC Symbol;Acc:HGNC:10910]
40. SYT12 ENSGALG00000004306 2 1 - - - - - - - - - 1.000 synaptotagmin 12 [Source:NCBI gene;Acc:422998]
41. ABTB2 ENSGALG00000031889 9 1 - - - - - - - - - 1.000 ankyrin repeat and BTB domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23842]
42. GVINP1 ENSGALG00000016556 4 1 - - - - - 1.000 - - - - GTPase, very large interferon inducible pseudogene 1, transcript variant X1
43. STAT4 ENSGALG00000033087 7 1 - - - - - - - - - 1.000 signal transducer and activator of transcription 4 [Source:NCBI gene;Acc:768406]
44. WDR63 ENSGALG00000008696 15 1 - - - - - 1.000 - - - - WD repeat domain 63 [Source:HGNC Symbol;Acc:HGNC:30711]
45. MARCO ENSGALG00000012119 5 1 - - - - - 1.000 - - - - macrophage receptor with collagenous structure [Source:NCBI gene;Acc:395488]
46. SERPINB5 ENSGALG00000012873 24 1 - - - - - 1.000 - - - - serpin family B member 5 [Source:HGNC Symbol;Acc:HGNC:8949]
47. CTSD ENSGALG00000006613 4 1 - - - - - 1.000 - - - - cathepsin D [Source:NCBI gene;Acc:396090]
48. FAM149B1 ENSGALG00000002693 16 1 - - - - - 1.000 - - - - family with sequence similarity 149 member B1 [Source:HGNC Symbol;Acc:HGNC:29162]
49. MAPK11 ENSGALG00000040023 15 1 - - - - - 1.000 - - - - mitogen-activated protein kinase 11 [Source:NCBI gene;Acc:417739]
50. ADAM20 ENSGALG00000013838, ENSGALG00000021341 5 1 - - - - - - - - - 1.000 ADAM metallopeptidase domain 20 [Source:HGNC Symbol;Acc:HGNC:199]
51. ENSGALG00000022715 ENSGALG00000022715 13 1 - - - - - 1.000 - - - -
52. ACRBP 0 1 - - - - - 1.000 - - - - acrosin binding protein
53. FGL1 ENSGALG00000013606 42 1 - - - - - 1.000 - - - - fibrinogen like 1 [Source:NCBI gene;Acc:422728]
54. ENSGALG00000007855 ENSGALG00000007855 7 1 - - - - - - - - - 1.000
55. ST6GALNAC3 ENSGALG00000009027 17 1 - - - - - 1.000 - - - - ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:19343]
56. VPREB3 ENSGALG00000021136 1 1 - - - - - - - - - 1.000 V-set pre-B cell surrogate light chain 3 [Source:HGNC Symbol;Acc:HGNC:12710]
57. KCNT2 ENSGALG00000041680 36 1 - - - - - - - - - 1.000 potassium sodium-activated channel subfamily T member 2 [Source:HGNC Symbol;Acc:HGNC:18866]
58. snoZ39 snoZ39 2 1 - - - - - - - - - 1.000
59. SRRM3 ENSGALG00000001932 12 1 - - - - - 1.000 - - - - serine/arginine repetitive matrix 3 [Source:HGNC Symbol;Acc:HGNC:26729]
60. GPR12 ENSGALG00000017102 4 1 - - - - - 1.000 - - - - G protein-coupled receptor 12 [Source:HGNC Symbol;Acc:HGNC:4466]
61. PAPPA ENSGALG00000007079 6 1 - - - - - 1.000 - - - - pappalysin 1 [Source:HGNC Symbol;Acc:HGNC:8602]
62. P2RX3 ENSGALG00000040479 5 1 - - - - - 1.000 - - - - Gallus gallus purinergic receptor P2X 3 (P2RX3), mRNA. [Source:RefSeq mRNA;Acc:NM_001329216]
63. ENSGALG00000026368 ENSGALG00000026368 1 1 - - - - - 1.000 - - - -
64. PGAP1 ENSGALG00000030789 3 1 - - - - - - - - - 1.000 post-GPI attachment to proteins 1, transcript variant X3
65. PPEF1 ENSGALG00000016522 3 1 - - - - - - - - - 1.000 protein phosphatase with EF-hand domain 1 [Source:HGNC Symbol;Acc:HGNC:9243]
66. SCARNA23 SCARNA23 2 1 - - - - - 1.000 - - - -
67. STEAP2 ENSGALG00000009017 10 1 - - - - - - - - - 1.000 STEAP2 metalloreductase [Source:HGNC Symbol;Acc:HGNC:17885]
68. CHSY1 ENSGALG00000026468 4 1 - - - - - 1.000 - - - - chondroitin sulfate synthase 1 [Source:HGNC Symbol;Acc:HGNC:17198]
69. KLHL23 ENSGALG00000020737 13 1 - - - - - 1.000 - - - - kelch like family member 23 [Source:HGNC Symbol;Acc:HGNC:27506]
70. CCDC64 CCDC64 2 1 - - - - - 1.000 - - - -
71. DDTNFR23 ENSGALG00000006407 4 1 - - - - - 1.000 - - - - death domain-containing tumor necrosis factor receptor superfamily member 23 [Source:NCBI gene;Acc:378902]
72. ENSGALG00000004511 ENSGALG00000004511 2 1 - - - - - - - - - 1.000
73. FHDC1 ENSGALG00000041054 34 0.998 - - - - - 0.998 - - - - FH2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29363]
74. TSPAN18 ENSGALG00000036901 14 0.987 - - - - - 0.987 - - - - tetraspanin 18 [Source:NCBI gene;Acc:395586]
75. ANKRD31 46 0.985 - - - - - 0.985 - - - - ankyrin repeat domain 31, transcript variant X2
76. CDH7 ENSGALG00000013782 11 0.983 - - - - - - - - - 0.983 cadherin 7 [Source:NCBI gene;Acc:374007]
77. MANSC4 32 0.944 - - - - - 0.944 - - - - MANSC domain containing 4, transcript variant X1
78. ENSGALG00000028298 ENSGALG00000028298 34 0.944 - - - - - 0.944 - - - -
79. FAR-2 FAR-2 24 0.943 - - - - - 0.943 - - - -
80. SLC35A3 12 0.936 - - - - - - - - - 0.936 solute carrier family 35 member A3, transcript variant X7
81. TNNC2 ENSGALG00000006835 2963 0.935 - - - - - 0.935 - - - - troponin C2, fast skeletal type [Source:NCBI gene;Acc:396434]
82. CD109 ENSGALG00000015910 11 0.928 - - - - - 0.928 - - - - CD109 molecule [Source:HGNC Symbol;Acc:HGNC:21685]
83. ENSGALG00000026913 ENSGALG00000026913 12 0.928 - - - - - - - - - 0.928
84. TMEM132E ENSGALG00000002312 16 0.91 - - - - - 0.910 - - - - transmembrane protein 132E [Source:HGNC Symbol;Acc:HGNC:26991]
85. CCM2L ENSGALG00000006479 344 0.905 - - - - - - - - - 0.905 CCM2 like scaffold protein [Source:HGNC Symbol;Acc:HGNC:16153]
86. WNT7B ENSGALG00000036255 3343 0.897 - - - - - 0.897 - - - - Wnt family member 7B [Source:NCBI gene;Acc:427937]
87. CBX7 ENSGALG00000041236 14 0.888 - - - - - 0.888 - - - - chromobox 7 [Source:HGNC Symbol;Acc:HGNC:1557]
88. ENSGALG00000019077 ENSGALG00000019077 49 0.878 - - - - - 0.878 - - - -
89. ENSGALG00000005227 ENSGALG00000005227 2 0.873 - - - - - - - - - 0.873
90. SLC7A10 ENSGALG00000004729 13 0.873 - - - - - - - - - 0.873 solute carrier family 7 member 10 [Source:HGNC Symbol;Acc:HGNC:11058]
91. ENSGALG00000003618 ENSGALG00000003618 12 0.872 - - - - - - - - - 0.872
92. CMYA5 16 0.87 - - - - - - - - - 0.870 cardiomyopathy associated 5
93. CLDN12 ENSGALG00000009038 16 0.868 - - - - - - - - - 0.868 claudin 12 [Source:HGNC Symbol;Acc:HGNC:2034]
94. ADAMTS7 7 0.868 - - - - - - - - - 0.868 ADAM metallopeptidase with thrombospondin type 1 motif 7
95. SH2D4B ENSGALG00000002370 10 0.868 - - - - - 0.868 - - - - SH2 domain containing 4B [Source:HGNC Symbol;Acc:HGNC:31440]
96. PLAGL2 ENSGALG00000006586 3 0.868 - - - - - - - - - 0.868 PLAG1 like zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:9047]
97. CLMN ENSGALG00000030719 60 0.852 - - - - - 0.852 - - - - calmin [Source:HGNC Symbol;Acc:HGNC:19972]
98. CRB2 ENSGALG00000001169 23 0.851 - - - - - - - - - 0.851 crumbs 2, cell polarity complex component [Source:HGNC Symbol;Acc:HGNC:18688]
99. ATHL1 ATHL1 16 0.843 - - - - - 0.843 - - - -
100. SYCP1 ENSGALG00000002511 13 0.837 - - - - - 0.837 - - - - synaptonemal complex protein 1 [Source:HGNC Symbol;Acc:HGNC:11487]

There are 57 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA