Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CFC1

Gene Name Gene ID Reads Annotation
CFC1 ENSGALG00000012623 3164 cripto, FRL-1, cryptic family 1 [Source:NCBI gene;Acc:395437]











Genes with expression patterns similar to CFC1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CFC1 ENSGALG00000012623 3164 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cripto, FRL-1, cryptic family 1 [Source:NCBI gene;Acc:395437]
2. GATA5 ENSGALG00000005352 11876 3.289 - - 0.713 0.856 - - - - 0.827 0.893 GATA binding protein 5 [Source:NCBI gene;Acc:396391]
3. TGFB2 ENSGALG00000009612 10223 2.4 - - 0.772 - - - - - 0.805 0.823 transforming growth factor beta 2 [Source:NCBI gene;Acc:421352]
4. PITX2 ENSGALG00000042492 20419 2.19 - - 0.733 0.728 - - - - - 0.729 paired like homeodomain 2 [Source:NCBI gene;Acc:395862]
5. SEC11C ENSGALG00000031663 4266 1.858 - - - - - - 0.998 0.860 - - SEC11 homolog C, signal peptidase complex subunit [Source:HGNC Symbol;Acc:HGNC:23400]
6. S100A11 ENSGALG00000036711 23454 1.808 - - - - - - 0.983 - 0.825 - S100 calcium binding protein A11 [Source:NCBI gene;Acc:396075]
7. APOA1 ENSGALG00000007114 10215 1.739 - - - - - - - - 0.892 0.847 apolipoprotein A1 [Source:NCBI gene;Acc:396536]
8. BAMBI ENSGALG00000040993 7562 1.632 - - - 0.750 - - - - - 0.882 BMP and activin membrane bound inhibitor [Source:NCBI gene;Acc:428413]
9. GCHFR ENSGALG00000032239 1608 1.58 - - - - - - - - 0.772 0.808 GTP cyclohydrolase I feedback regulator [Source:NCBI gene;Acc:423003]
10. GATA6 ENSGALG00000014976 3256 1.531 - - - 0.724 - - - - - 0.807 GATA binding protein 6 [Source:NCBI gene;Acc:396390]
11. NR0B1 ENSGALG00000016287 481 1.484 - - - - - - - - 0.719 0.765 nuclear receptor subfamily 0 group B member 1 [Source:NCBI gene;Acc:395285]
12. PERP2 ENSGALG00000027207 1240 1.466 - - - 0.728 - - - - - 0.738 PERP2, TP53 apoptosis effector [Source:NCBI gene;Acc:421682]
13. SMAD6 ENSGALG00000025898 3144 1.459 - - - - - - - 0.750 - 0.709 SMAD family member 6 [Source:NCBI gene;Acc:374096]
14. JUN ENSGALG00000010870 2764 1.458 - - 0.704 - - - - - 0.754 - Jun proto-oncogene, AP-1 transcription factor subunit [Source:NCBI gene;Acc:424673]
15. GREB1 ENSGALG00000016455 12794 1.458 - - 0.704 - - - - - 0.754 - growth regulating estrogen receptor binding 1 [Source:HGNC Symbol;Acc:HGNC:24885]
16. TPM4 ENSGALG00000002563 15621 1.453 0.733 - - - - - - - 0.720 - tropomyosin 4 [Source:HGNC Symbol;Acc:HGNC:12013]
17. F5 ENSGALG00000029298 1850 1.436 - - - 0.704 - - - - 0.732 - coagulation factor V [Source:HGNC Symbol;Acc:HGNC:3542]
18. CUX1_1 ENSGALG00000021636 3705 0.999 - - - - - - 0.999 - - - cut like homeobox 1 [Source:NCBI gene;Acc:101749861]
19. MEIS1 ENSGALG00000041626 3865 0.999 - - - - - - 0.999 - - - Meis homeobox 1 [Source:NCBI gene;Acc:395589]
20. AIFM1 ENSGALG00000004003 10451 0.999 - - - - - - 0.999 - - - apoptosis inducing factor mitochondria associated 1 [Source:NCBI gene;Acc:428688]
21. TYW3 ENSGALG00000032549 4869 0.999 - - - - - - 0.999 - - - tRNA-yW synthesizing protein 3 homolog [Source:NCBI gene;Acc:424720]
22. N6AMT2 N6AMT2 4703 0.999 - - - - - - 0.999 - - -
23. ACADSB ENSGALG00000041417 7710 0.999 - - - - - - 0.999 - - - acyl-CoA dehydrogenase short/branched chain [Source:NCBI gene;Acc:423947]
24. ZFAND1 ENSGALG00000042794 2849 0.999 - - - - - - 0.999 - - - zinc finger AN1-type containing 1 [Source:HGNC Symbol;Acc:HGNC:25858]
25. NUBP2 ENSGALG00000002316 3643 0.999 - - - - - - 0.999 - - - nucleotide binding protein 2 [Source:NCBI gene;Acc:416402]
26. ATP2B4 ENSGALG00000003601 3746 0.999 - - - - - - 0.999 - - - ATPase plasma membrane Ca2+ transporting 4 [Source:HGNC Symbol;Acc:HGNC:817]
27. STAM ENSGALG00000035287 7649 0.998 - - - - - - 0.998 - - - signal transducing adaptor molecule [Source:HGNC Symbol;Acc:HGNC:11357]
28. RTF1 ENSGALG00000008595 31933 0.998 - - - - - - 0.998 - - - RTF1 homolog, Paf1/RNA polymerase II complex component [Source:HGNC Symbol;Acc:HGNC:28996]
29. MYLK ENSGALG00000011708 10434 0.998 - - - - - - 0.998 - - - Gallus gallus myosin light chain kinase (MYLK), transcript variant 1, mRNA. [Source:RefSeq mRNA;Acc:NM_001322361]
30. DAP ENSGALG00000013002 6815 0.997 - - - - - - 0.997 - - - death associated protein [Source:NCBI gene;Acc:420923]
31. KDM2B ENSGALG00000004225 11513 0.997 - - - - - - 0.997 - - - lysine demethylase 2B [Source:HGNC Symbol;Acc:HGNC:13610]
32. PLEKHH2 ENSGALG00000009947 6384 0.997 - - - - - - 0.997 - - - pleckstrin homology, MyTH4 and FERM domain containing H2 [Source:HGNC Symbol;Acc:HGNC:30506]
33. COPS5 ENSGALG00000030843 11942 0.995 - - - - - - 0.995 - - - COP9 signalosome subunit 5 [Source:NCBI gene;Acc:426579]
34. PRKCI ENSGALG00000009364 11574 0.994 - - - - - - 0.994 - - - protein kinase C iota [Source:NCBI gene;Acc:424991]
35. KIAA1143 ENSGALG00000035952 6735 0.991 - - - - - - 0.991 - - - KIAA1143 [Source:NCBI gene;Acc:420709]
36. TTR ENSGALG00000015143 9764 0.99 - - - - - - 0.990 - - - transthyretin [Source:NCBI gene;Acc:396277]
37. MPHOSPH6 ENSGALG00000031983 17073 0.989 - - - - - - 0.989 - - - M-phase phosphoprotein 6 [Source:NCBI gene;Acc:415811]
38. EIF3H ENSGALG00000040522 39919 0.989 - - - - - - 0.989 - - - eukaryotic translation initiation factor 3 subunit H [Source:NCBI gene;Acc:420288]
39. MYH10 ENSGALG00000001183 26889 0.988 - - - - - - 0.988 - - - myosin, heavy chain 10, non-muscle [Source:NCBI gene;Acc:396465]
40. YWHAH ENSGALG00000006743 29828 0.97 - - - - - - 0.970 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein eta [Source:NCBI gene;Acc:416955]
41. HP1BP3 ENSGALG00000010079 33723 0.968 - - - - - - 0.968 - - - heterochromatin protein 1 binding protein 3 [Source:NCBI gene;Acc:425543]
42. CCNB2 ENSGALG00000004161 50324 0.966 - - - - - - 0.966 - - - cyclin B2 [Source:NCBI gene;Acc:415400]
43. RPL23A ENSGALG00000003966 369097 0.965 - - - - - - 0.965 - - - ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
44. EEF2 ENSGALG00000033884 62036 0.959 - - - - - - 0.959 - - - eukaryotic translation elongation factor 2 [Source:NCBI gene;Acc:396325]
45. RPL30 ENSGALG00000029897 58241 0.952 - - - - - - 0.952 - - - ribosomal protein L30 [Source:NCBI gene;Acc:425416]
46. NDUFA5 ENSGALG00000008821 22926 0.938 - - - - - - 0.938 - - - NADH:ubiquinone oxidoreductase subunit A5 [Source:NCBI gene;Acc:417753]
47. PHB2 ENSGALG00000014567 104774 0.931 - - - - - - 0.931 - - - prohibitin 2 [Source:NCBI gene;Acc:771124]
48. CIDEC ENSGALG00000026945 718 0.924 - - - - - - - - - 0.924 cell death inducing DFFA like effector c [Source:NCBI gene;Acc:100859733]
49. SLC25A48 ENSGALG00000006341 2606 0.919 - - - - - - - 0.919 - - solute carrier family 25 member 48 [Source:HGNC Symbol;Acc:HGNC:30451]
50. COL4A5 ENSGALG00000008141 15874 0.914 - - - - - - - - 0.914 - collagen type IV alpha 5 chain [Source:HGNC Symbol;Acc:HGNC:2207]
51. CHCHD2 ENSGALG00000002495 99536 0.908 - - - - - - 0.908 - - - coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:NCBI gene;Acc:417544]
52. COL6A2 ENSGALG00000039216 892 0.908 - - - - - - - 0.908 - - collagen type VI alpha 2 chain [Source:NCBI gene;Acc:396292]
53. UBB ENSGALG00000004509 139598 0.903 - - - - - - 0.903 - - - Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
54. TES ENSGALG00000031934 5908 0.902 - - - - - - - 0.902 - - testin LIM domain protein [Source:NCBI gene;Acc:395332]
55. CHUK ENSGALG00000003289 5698 0.9 - - - - - - - 0.900 - - conserved helix-loop-helix ubiquitous kinase [Source:NCBI gene;Acc:423669]
56. POLA1 ENSGALG00000016312 9440 0.899 - - - - - - - 0.899 - - DNA polymerase alpha 1, catalytic subunit [Source:HGNC Symbol;Acc:HGNC:9173]
57. RGP1 ENSGALG00000002394 5937 0.899 - - - - - - 0.899 - - - RGP1 homolog, RAB6A GEF complex partner 1 [Source:NCBI gene;Acc:431658]
58. ORAI1 ENSGALG00000004240 515 0.898 - - - - - - - 0.898 - - ORAI calcium release-activated calcium modulator 1 [Source:NCBI gene;Acc:416845]
59. NRG4 ENSGALG00000002952 1440 0.897 - - - - - - - 0.897 - - neuregulin 4 [Source:NCBI gene;Acc:415354]
60. DNAJC11 ENSGALG00000000627 769 0.896 - - - - - - - 0.896 - - DnaJ heat shock protein family (Hsp40) member C11 [Source:HGNC Symbol;Acc:HGNC:25570]
61. C4BPA ENSGALG00000001175 4278 0.895 - - - - - - - 0.895 - - complement component 4 binding protein, alpha [Source:NCBI gene;Acc:395384]
62. ABCB10 ENSGALG00000011096 1407 0.895 - - - - - - - 0.895 - - ATP binding cassette subfamily B member 10 [Source:HGNC Symbol;Acc:HGNC:41]
63. GADD45 GADD45 8780 0.893 - - - - - - - 0.893 - -
64. PYGL ENSGALG00000012365 4691 0.893 - - - - - - - 0.893 - - glycogen phosphorylase L [Source:NCBI gene;Acc:378909]
65. ZBTB26 ENSGALG00000042762 1920 0.893 - - - - - - - 0.893 - - zinc finger and BTB domain containing 26 [Source:NCBI gene;Acc:417107]
66. SLC41A1 ENSGALG00000000721 1604 0.892 - - - - - - - 0.892 - - solute carrier family 41 member 1 [Source:HGNC Symbol;Acc:HGNC:19429]
67. LRRC45 ENSGALG00000002877 1751 0.892 - - - - - - - 0.892 - - leucine rich repeat containing 45 [Source:NCBI gene;Acc:770573]
68. CHALK5 CHALK5 1351 0.892 - - - - - - - 0.892 - -
69. HSDL1 ENSGALG00000003273 1108 0.892 - - - - - - - 0.892 - - hydroxysteroid dehydrogenase like 1 [Source:NCBI gene;Acc:415703]
70. TM2D3 ENSGALG00000026271 2566 0.891 - - - - - - - 0.891 - - TM2 domain containing 3 [Source:NCBI gene;Acc:415390]
71. RBX1 ENSGALG00000011993 26090 0.891 - - - - - - 0.891 - - - ring-box 1 [Source:NCBI gene;Acc:418001]
72. YARS2 503 0.889 - - - - - - - 0.889 - - tyrosyl-tRNA synthetase 2
73. LIPG ENSGALG00000043734 2490 0.889 - - - - - - - 0.889 - - lipase G, endothelial type [Source:HGNC Symbol;Acc:HGNC:6623]
74. CECR5L ENSGALG00000005020 116 0.888 - - - - - - - 0.888 - - cat eye syndrome chromosome region, candidate 5-like
75. TBX3 ENSGALG00000036043 2888 0.887 - - - - - - - 0.887 - - T-box 3 [Source:NCBI gene;Acc:374202]
76. CENPC1 CENPC1 3324 0.887 - - - - - - - 0.887 - -
77. STK17B ENSGALG00000007924 519 0.886 - - - - - - - 0.886 - - serine/threonine kinase 17b [Source:NCBI gene;Acc:424049]
78. LAMP2 ENSGALG00000008572 198 0.886 - - - - - - - 0.886 - - lysosomal associated membrane protein 2 [Source:NCBI gene;Acc:414800]
79. FUBP1 ENSGALG00000008939 2850 0.886 - - - - - - - 0.886 - - far upstream element binding protein 1 [Source:NCBI gene;Acc:424551]
80. MAPK6 ENSGALG00000031448 28384 0.886 - - - - - - 0.886 - - - mitogen-activated protein kinase 6 [Source:NCBI gene;Acc:415419]
81. TFG ENSGALG00000015299 849 0.885 - - - - - - - 0.885 - - TRK-fused gene [Source:HGNC Symbol;Acc:HGNC:11758]
82. GPX7 ENSGALG00000010633 7224 0.885 - - - - - - - 0.885 - - glutathione peroxidase 7 [Source:NCBI gene;Acc:424643]
83. HNRNPAB ENSGALG00000014381 41009 0.885 - - - - - - 0.885 - - - heterogeneous nuclear ribonucleoprotein A/B [Source:NCBI gene;Acc:396268]
84. TMEM200A ENSGALG00000002282 77 0.884 - - - - - - - 0.884 - - transmembrane protein 200A [Source:HGNC Symbol;Acc:HGNC:21075]
85. MDM4 ENSGALG00000000636 91 0.884 - - - - - - - 0.884 - - MDM4, p53 regulator [Source:HGNC Symbol;Acc:HGNC:6974]
86. RPAP2 ENSGALG00000005953 2085 0.884 - - - - - - - 0.884 - - RNA polymerase II associated protein 2 [Source:HGNC Symbol;Acc:HGNC:25791]
87. TRIM71 ENSGALG00000019622 1633 0.884 - - - - - - - 0.884 - - tripartite motif containing 71 [Source:NCBI gene;Acc:428445]
88. EDA ENSGALG00000035966 602 0.883 - - - - - - - 0.883 - - ectodysplasin A [Source:HGNC Symbol;Acc:HGNC:3157]
89. HDAC4 ENSGALG00000004288 2124 0.883 - - - - - - - 0.883 - - histone deacetylase 4 [Source:NCBI gene;Acc:374207]
90. SOX5 ENSGALG00000032768 998 0.883 - - - - - - - 0.883 - - SRY-box 5 [Source:NCBI gene;Acc:418195]
91. VPS37A ENSGALG00000013646 55 0.883 - - - - - - - 0.883 - - VPS37A, ESCRT-I subunit [Source:HGNC Symbol;Acc:HGNC:24928]
92. CCDC51 ENSGALG00000006465 1845 0.882 - - - - - - - 0.882 - - coiled-coil domain containing 51, transcript variant X1
93. NXT2 ENSGALG00000008092 2477 0.882 - - - - - - - 0.882 - - nuclear transport factor 2 like export factor 2 [Source:NCBI gene;Acc:422346]
94. CWH43 ENSGALG00000041921 68 0.882 - - - - - - - 0.882 - - cell wall biogenesis 43 C-terminal homolog [Source:HGNC Symbol;Acc:HGNC:26133]
95. TRAM2 ENSGALG00000016673 438 0.882 - - - - - - - 0.882 - - translocation associated membrane protein 2 [Source:HGNC Symbol;Acc:HGNC:16855]
96. GAA ENSGALG00000038853 158 0.882 - - - - - - - 0.882 - - glucosidase alpha, acid [Source:HGNC Symbol;Acc:HGNC:4065]
97. RIN3 ENSGALG00000010806 729 0.881 - - - - - - - 0.881 - - Ras and Rab interactor 3 [Source:HGNC Symbol;Acc:HGNC:18751]
98. II II 929 0.881 - - - - - - - 0.881 - -
99. CASP7 ENSGALG00000008933 506 0.881 - - - - - - - 0.881 - - caspase 7 [Source:HGNC Symbol;Acc:HGNC:1508]
100. TOX ENSGALG00000039102 1434 0.88 - - - - - - - 0.880 - - thymocyte selection associated high mobility group box [Source:NCBI gene;Acc:421138]

There are 232 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA