Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for CENPF

Gene Name Gene ID Reads Annotation
CENPF ENSGALG00000009690 10429 centromere protein F [Source:NCBI gene;Acc:395357]











Genes with expression patterns similar to CENPF

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CENPF ENSGALG00000009690 10429 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 centromere protein F [Source:NCBI gene;Acc:395357]
2. ARID4A ENSGALG00000012037 8554 1.712 - - - - - - 0.931 0.781 - - AT-rich interaction domain 4A [Source:NCBI gene;Acc:423541]
3. SLC25A14 ENSGALG00000004063 5574 1.633 - - - - - - 0.850 0.783 - - solute carrier family 25 member 14 [Source:NCBI gene;Acc:422141]
4. ATRX ENSGALG00000007843 34172 1.629 0.784 - - - - - 0.845 - - - ATRX, chromatin remodeler [Source:HGNC Symbol;Acc:HGNC:886]
5. RBBP6 ENSGALG00000006043 9708 1.601 0.702 - - - - - 0.899 - - - RB binding protein 6, ubiquitin ligase [Source:HGNC Symbol;Acc:HGNC:9889]
6. PAX1 ENSGALG00000039040 3339 1.565 - - - - - - 0.833 0.732 - - paired box 1 [Source:HGNC Symbol;Acc:HGNC:8615]
7. XRN1 ENSGALG00000002706 4014 0.965 - - - - - - 0.965 - - - 5'-3' exoribonuclease 1 [Source:HGNC Symbol;Acc:HGNC:30654]
8. DYNC1LI1 ENSGALG00000011491 11011 0.954 - - - - - - 0.954 - - - dynein cytoplasmic 1 light intermediate chain 1 [Source:NCBI gene;Acc:420668]
9. UPF1 ENSGALG00000003220 9496 0.951 - - - - - - 0.951 - - - UPF1, RNA helicase and ATPase [Source:HGNC Symbol;Acc:HGNC:9962]
10. ATG12 ENSGALG00000002345 3607 0.95 - - - - - - - 0.950 - - autophagy related 12 [Source:HGNC Symbol;Acc:HGNC:588]
11. PHLDA2 ENSGALG00000032687 7733 0.95 - - - - - - - 0.950 - - pleckstrin homology like domain family A member 2 [Source:NCBI gene;Acc:423088]
12. PPP3R1 ENSGALG00000023648 3417 0.947 - - - - - - 0.947 - - - protein phosphatase 3 regulatory subunit B, alpha [Source:NCBI gene;Acc:378804]
13. RPA1 ENSGALG00000003072 8023 0.946 - - - - - - 0.946 - - - replication protein A1 [Source:NCBI gene;Acc:417563]
14. ATE1 ENSGALG00000009502 3751 0.946 - - - - - - 0.946 - - - arginyltransferase 1 [Source:NCBI gene;Acc:423936]
15. MRE11A MRE11A 5754 0.944 - - - - - - 0.944 - - -
16. SIRT1 ENSGALG00000002761 9028 0.939 - - - - - - 0.939 - - - sirtuin 1 [Source:NCBI gene;Acc:423646]
17. EI24 ENSGALG00000038097 24081 0.939 - - - - - - 0.939 - - - EI24, autophagy associated transmembrane protein [Source:NCBI gene;Acc:419711]
18. ZMYND11 ENSGALG00000006599 5740 0.937 - - - - - - 0.937 - - - zinc finger MYND-type containing 11 [Source:HGNC Symbol;Acc:HGNC:16966]
19. BDH1_1 ENSGALG00000023601 6109 0.936 - - - - - - - 0.936 - - 3-hydroxybutyrate dehydrogenase, type 1
20. YBX1 ENSGALG00000004848 20992 0.935 - - - - - - 0.935 - - - Y-box binding protein 1 [Source:NCBI gene;Acc:386575]
21. KCTD9 ENSGALG00000000275 3455 0.932 - - - - - - 0.932 - - - potassium channel tetramerization domain containing 9 [Source:NCBI gene;Acc:419526]
22. RILPL2 ENSGALG00000003321 5632 0.93 - - - - - - 0.930 - - - Rab interacting lysosomal protein like 2 [Source:HGNC Symbol;Acc:HGNC:28787]
23. SDF4 ENSGALG00000001872 6382 0.929 - - - - - - 0.929 - - - stromal cell derived factor 4 [Source:NCBI gene;Acc:419423]
24. SCRN1 ENSGALG00000011176 3783 0.927 - - - - - - 0.927 - - - secernin 1 [Source:HGNC Symbol;Acc:HGNC:22192]
25. SF3A3 ENSGALG00000001540 9664 0.925 - - - - - - 0.925 - - - splicing factor 3a subunit 3 [Source:HGNC Symbol;Acc:HGNC:10767]
26. TM9SF3 ENSGALG00000005534 15290 0.925 - - - - - - 0.925 - - - transmembrane 9 superfamily member 3
27. NDUFA9 ENSGALG00000017282 14358 0.924 - - - - - - 0.924 - - - NADH:ubiquinone oxidoreductase subunit A9 [Source:NCBI gene;Acc:419039]
28. MAP1LC3A ENSGALG00000038721 2230 0.923 - - - - - - 0.923 - - - microtubule associated protein 1 light chain 3 alpha
29. LATS2 4776 0.923 - - - - - - 0.923 - - - large tumor suppressor kinase 2
30. RBM12B ENSGALG00000035129 4314 0.922 - - - - - - 0.922 - - - RNA binding motif protein 12B [Source:NCBI gene;Acc:420223]
31. ENSGALG00000027854 ENSGALG00000027854 5007 0.92 - - - - - - 0.920 - - -
32. EIF4G3 ENSGALG00000010084 5881 0.919 - - - - - - 0.919 - - - eukaryotic translation initiation factor 4 gamma 3 [Source:HGNC Symbol;Acc:HGNC:3298]
33. METTL11A METTL11A 11876 0.918 - - - - - - 0.918 - - -
34. DNA2 ENSGALG00000004037 5426 0.918 - - - - - - 0.918 - - - DNA replication helicase/nuclease 2 [Source:NCBI gene;Acc:423688]
35. HDGFL3 ENSGALG00000006036 13576 0.918 - - - - - - 0.918 - - - HDGF like 3 [Source:HGNC Symbol;Acc:HGNC:24937]
36. BTAF1 ENSGALG00000030598 3556 0.917 - - - - - - 0.917 - - - B-TFIID TATA-box binding protein associated factor 1 [Source:HGNC Symbol;Acc:HGNC:17307]
37. MYST2 MYST2 8078 0.917 - - - - - - 0.917 - - -
38. H2AFY_1 ENSGALG00000040141 4895 0.915 - - - - - - 0.915 - - - H2A histone family, member Y [Source:NCBI gene;Acc:395858]
39. OGFOD1 6926 0.915 - - - - - - 0.915 - - - 2-oxoglutarate and iron dependent oxygenase domain containing 1
40. ARHGAP29 ENSGALG00000005683 3622 0.915 - - - - - - 0.915 - - - Rho GTPase activating protein 29 [Source:NCBI gene;Acc:424488]
41. SHQ1 ENSGALG00000007798 1982 0.915 - - - - - - 0.915 - - - SHQ1, H/ACA ribonucleoprotein assembly factor [Source:HGNC Symbol;Acc:HGNC:25543]
42. POLR3E ENSGALG00000007008 4010 0.915 - - - - - - 0.915 - - - RNA polymerase III subunit E [Source:HGNC Symbol;Acc:HGNC:30347]
43. PEPD ENSGALG00000004899 9785 0.914 - - - - - - 0.914 - - - peptidase D [Source:NCBI gene;Acc:415776]
44. AP2B1 ENSGALG00000042125 13229 0.913 - - - - - - 0.913 - - - adaptor related protein complex 2 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:563]
45. NCOA4 ENSGALG00000002066 10544 0.913 - - - - - - 0.913 - - - nuclear receptor coactivator 4 [Source:NCBI gene;Acc:423615]
46. SOD2 ENSGALG00000011661 13178 0.913 - - - - - - 0.913 - - - superoxide dismutase 2 [Source:NCBI gene;Acc:374042]
47. TBCCD1 ENSGALG00000006566 2696 0.913 - - - - - - 0.913 - - - TBCC domain containing 1 [Source:NCBI gene;Acc:424869]
48. THOC2 ENSGALG00000008507 9501 0.912 - - - - - - 0.912 - - - THO complex 2 [Source:HGNC Symbol;Acc:HGNC:19073]
49. LARP1 ENSGALG00000040109 14808 0.911 - - - - - - 0.911 - - - La ribonucleoprotein domain family member 1 [Source:HGNC Symbol;Acc:HGNC:29531]
50. LAP3 ENSGALG00000006334 21076 0.91 - - - - - - 0.910 - - - leucine aminopeptidase 3 [Source:NCBI gene;Acc:425306]
51. TRAM1 ENSGALG00000041112 22876 0.91 - - - - - - 0.910 - - - translocation associated membrane protein 1 [Source:NCBI gene;Acc:378918]
52. CCND1 ENSGALG00000007555 6715 0.91 - - - - - - 0.910 - - - cyclin D1 [Source:NCBI gene;Acc:396341]
53. COPE ENSGALG00000003153 19444 0.91 - - - - - - 0.910 - - - coatomer protein complex subunit epsilon [Source:NCBI gene;Acc:420117]
54. DISP1 3281 0.909 - - - - - - 0.909 - - - dispatched RND transporter family member 1, transcript variant X3
55. BFAR ENSGALG00000003111 1778 0.909 - - - - - - 0.909 - - - bifunctional apoptosis regulator [Source:HGNC Symbol;Acc:HGNC:17613]
56. TMEM108 ENSGALG00000036412 2903 0.909 - - - - - - 0.909 - - - transmembrane protein 108 [Source:HGNC Symbol;Acc:HGNC:28451]
57. gga-mir-6643 ENSGALG00000027935 4442 0.908 - - - - - - 0.908 - - - gga-mir-6643 [Source:miRBase;Acc:MI0022462]
58. AKAP7 ENSGALG00000029794 3287 0.908 - - - - - - 0.908 - - - A-kinase anchoring protein 7 [Source:HGNC Symbol;Acc:HGNC:377]
59. ARNT2 ENSGALG00000006445 7050 0.908 - - - - - - 0.908 - - - aryl hydrocarbon receptor nuclear translocator 2 [Source:HGNC Symbol;Acc:HGNC:16876]
60. ABCD3 ENSGALG00000005647 4844 0.907 - - - - - - 0.907 - - - ATP binding cassette subfamily D member 3 [Source:NCBI gene;Acc:424487]
61. E2F6 ENSGALG00000016454 4747 0.906 - - - - - - 0.906 - - - E2F transcription factor 6 [Source:NCBI gene;Acc:421943]
62. SREBF2 ENSGALG00000041687 4519 0.905 - - - - - - 0.905 - - - sterol regulatory element binding transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:11290]
63. LMNB2 ENSGALG00000000470 4364 0.904 - - - - - - 0.904 - - - lamin B2 [Source:NCBI gene;Acc:396222]
64. BPTF ENSGALG00000038222 7521 0.904 - - - - - - 0.904 - - - bromodomain PHD finger transcription factor [Source:HGNC Symbol;Acc:HGNC:3581]
65. KIF20A ENSGALG00000035030 10249 0.904 - - - - - - 0.904 - - - kinesin family member 20A [Source:NCBI gene;Acc:416220]
66. SEMA4B ENSGALG00000008297 11202 0.904 - - - - - - 0.904 - - - semaphorin 4B [Source:HGNC Symbol;Acc:HGNC:10730]
67. MOB2 ENSGALG00000030499 3658 0.904 - - - - - - 0.904 - - - MOB kinase activator 2 [Source:HGNC Symbol;Acc:HGNC:24904]
68. ATN1 ENSGALG00000014554 3270 0.902 - - - - - - 0.902 - - - atrophin 1 [Source:HGNC Symbol;Acc:HGNC:3033]
69. NDUFB8 ENSGALG00000005704 5781 0.901 - - - - - - 0.901 - - - NADH:ubiquinone oxidoreductase subunit B8 [Source:NCBI gene;Acc:423763]
70. LACTB2 ENSGALG00000038745 3460 0.901 - - - - - - 0.901 - - - lactamase beta 2 [Source:NCBI gene;Acc:420178]
71. IRAK2 ENSGALG00000008407 5934 0.901 - - - - - - 0.901 - - - interleukin 1 receptor associated kinase 2 [Source:NCBI gene;Acc:416118]
72. HACE1 ENSGALG00000015415 1194 0.901 - - - - - - 0.901 - - - HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:421788]
73. DNAJA3 ENSGALG00000007821 3963 0.9 - - - - - - 0.900 - - - DnaJ heat shock protein family (Hsp40) member A3 [Source:HGNC Symbol;Acc:HGNC:11808]
74. CLPTM1L ENSGALG00000013187 9733 0.9 - - - - - - 0.900 - - - CLPTM1 like [Source:NCBI gene;Acc:420973]
75. COX7A2L ENSGALG00000037996 13646 0.898 - - - - - - 0.898 - - - cytochrome c oxidase subunit 7A2 like [Source:NCBI gene;Acc:421392]
76. MOB1B ENSGALG00000011573 567 0.897 - - - - - - 0.897 - - - MOB kinase activator 1B [Source:HGNC Symbol;Acc:HGNC:29801]
77. RRN3 ENSGALG00000041989 3934 0.897 - - - - - - 0.897 - - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
78. LEPROTL1 ENSGALG00000024482 4251 0.897 - - - - - - 0.897 - - - leptin receptor overlapping transcript-like 1
79. PPIF ENSGALG00000004809 5586 0.895 - - - - - - 0.895 - - - peptidylprolyl isomerase F [Source:NCBI gene;Acc:423723]
80. GCLM ENSGALG00000005782 15789 0.895 - - - - - - 0.895 - - - glutamate-cysteine ligase modifier subunit [Source:NCBI gene;Acc:424492]
81. PNO1 ENSGALG00000009093 11153 0.893 - - - - - - 0.893 - - - partner of NOB1 homolog [Source:NCBI gene;Acc:769547]
82. INTS10 ENSGALG00000010130 6320 0.893 - - - - - - 0.893 - - - integrator complex subunit 10 [Source:NCBI gene;Acc:422489]
83. CAMKK2 ENSGALG00000040131 2795 0.892 - - - - - - 0.892 - - - calcium/calmodulin dependent protein kinase kinase 2, transcript variant X9
84. XPA ENSGALG00000028998 8621 0.892 - - - - - - 0.892 - - - XPA, DNA damage recognition and repair factor [Source:NCBI gene;Acc:395659]
85. CLCN3 ENSGALG00000009674 3704 0.892 - - - - - - 0.892 - - - chloride voltage-gated channel 3 [Source:HGNC Symbol;Acc:HGNC:2021]
86. CETN2 ENSGALG00000007510 1688 0.891 - - - - - - 0.891 - - - centrin 2 [Source:NCBI gene;Acc:422303]
87. SLC1A1 ENSGALG00000010187 637 0.891 - - - - - - 0.891 - - - solute carrier family 1 member 1 [Source:HGNC Symbol;Acc:HGNC:10939]
88. POLA1 ENSGALG00000016312 9440 0.891 - - - - - - 0.891 - - - DNA polymerase alpha 1, catalytic subunit [Source:HGNC Symbol;Acc:HGNC:9173]
89. FASTKD2 ENSGALG00000008529 7439 0.889 - - - - - - 0.889 - - - FAST kinase domains 2 [Source:HGNC Symbol;Acc:HGNC:29160]
90. TCP1 ENSGALG00000011637 73216 0.889 - - - - - - 0.889 - - - t-complex 1 [Source:NCBI gene;Acc:421586]
91. MED6 ENSGALG00000029743 9414 0.889 - - - - - - 0.889 - - - mediator complex subunit 6 [Source:NCBI gene;Acc:426282]
92. KIF15 ENSGALG00000036645 9946 0.888 - - - - - - 0.888 - - - kinesin family member 15 [Source:HGNC Symbol;Acc:HGNC:17273]
93. MRPS11 ENSGALG00000006777 16009 0.888 - - - - - - 0.888 - - - mitochondrial ribosomal protein S11 [Source:NCBI gene;Acc:415498]
94. AK6 ENSGALG00000020534 4791 0.887 - - - - - - 0.887 - - - adenylate kinase 6 [Source:NCBI gene;Acc:425215]
95. MSRA ENSGALG00000028032 2607 0.887 - - - - - - 0.887 - - - methionine sulfoxide reductase A [Source:HGNC Symbol;Acc:HGNC:7377]
96. WBP11 ENSGALG00000011745 11182 0.886 - - - - - - 0.886 - - - WW domain binding protein 11, transcript variant X1
97. MTFMT ENSGALG00000007353 805 0.885 - - - - - - 0.885 - - - mitochondrial methionyl-tRNA formyltransferase [Source:HGNC Symbol;Acc:HGNC:29666]
98. ARL6IP5 ENSGALG00000038904 12956 0.885 - - - - - - 0.885 - - - ADP ribosylation factor like GTPase 6 interacting protein 5 [Source:NCBI gene;Acc:426074]
99. BCAS1 ENSGALG00000007796 379 0.884 - - - - - - 0.884 - - - breast carcinoma amplified sequence 1 [Source:HGNC Symbol;Acc:HGNC:974]
100. MED7 ENSGALG00000003870 4244 0.883 - - - - - - 0.883 - - - mediator complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:2378]

There are 173 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA