Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CDX2

Gene Name Gene ID Reads Annotation
CDX2 ENSGALG00000034983 34 caudal type homeobox 2 [Source:NCBI gene;Acc:374205]











Genes with expression patterns similar to CDX2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CDX2 ENSGALG00000034983 34 4 - - - 1.000 1.000 - 1.000 1.000 - - caudal type homeobox 2 [Source:NCBI gene;Acc:374205]
2. TMEM200A ENSGALG00000002282 77 0.955 - - - - - - 0.955 - - - transmembrane protein 200A [Source:HGNC Symbol;Acc:HGNC:21075]
3. GALNT14 ENSGALG00000009078 126 0.954 - - - - - - 0.954 - - - polypeptide N-acetylgalactosaminyltransferase 14 [Source:HGNC Symbol;Acc:HGNC:22946]
4. ALDH6A1 ENSGALG00000010211 29 0.946 - - - - - - 0.946 - - - aldehyde dehydrogenase 6 family member A1 [Source:HGNC Symbol;Acc:HGNC:7179]
5. ZDHHC8 ENSGALG00000002124 35 0.929 - - - - - - 0.929 - - - zinc finger DHHC-type containing 8 [Source:NCBI gene;Acc:416788]
6. SRGAP2 ENSGALG00000000816 97 0.929 - - - - - - 0.929 - - - SLIT-ROBO Rho GTPase activating protein 2, transcript variant X11
7. HINFP ENSGALG00000006806 15 0.929 - - - - - - 0.929 - - - histone H4 transcription factor [Source:HGNC Symbol;Acc:HGNC:17850]
8. ANTXR2 ENSGALG00000043675 52 0.929 - - - - - - 0.929 - - - ANTXR cell adhesion molecule 2 [Source:HGNC Symbol;Acc:HGNC:21732]
9. SYNJ2 ENSGALG00000013727 17 0.929 - - - - - - 0.929 - - - synaptojanin 2 [Source:HGNC Symbol;Acc:HGNC:11504]
10. EEA1 ENSGALG00000011280 923 0.925 - - - - - - 0.925 - - - early endosome antigen 1 [Source:HGNC Symbol;Acc:HGNC:3185]
11. ENSGALG00000026142 ENSGALG00000026142 85 0.921 - - - - - - 0.921 - - -
12. ALOX5AP ENSGALG00000026781 28 0.918 - - - - - - 0.918 - - - arachidonate 5-lipoxygenase activating protein [Source:NCBI gene;Acc:770904]
13. ST6GAL2 ENSGALG00000016803 24 0.917 - - - - - - 0.917 - - - ST6 beta-galactoside alpha-2,6-sialyltransferase 2 [Source:NCBI gene;Acc:403122]
14. PEX7 ENSGALG00000013874 34 0.911 - - - - - - 0.911 - - - peroxisomal biogenesis factor 7 [Source:NCBI gene;Acc:421687]
15. PPM1F ENSGALG00000039121 26 0.911 - - - - - - 0.911 - - - protein phosphatase, Mg2+/Mn2+ dependent 1F [Source:HGNC Symbol;Acc:HGNC:19388]
16. IMPG2 ENSGALG00000015322 74 0.908 - - - - - - 0.908 - - - interphotoreceptor matrix proteoglycan 2 [Source:NCBI gene;Acc:418393]
17. CCDC175 17 0.907 - - - - - - 0.907 - - - coiled-coil domain containing 175
18. TGFBRAP1 ENSGALG00000016795 81 0.905 - - - - - - 0.905 - - - transforming growth factor beta receptor associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16836]
19. ZDHHC22 ENSGALG00000023099 10 0.905 - - - - - - 0.905 - - - zinc finger DHHC-type containing 22 [Source:HGNC Symbol;Acc:HGNC:20106]
20. OSBPL10 45 0.905 - - - - - - 0.905 - - - oxysterol binding protein like 10
21. KCTD8 ENSGALG00000014225 47 0.905 - - - - - - 0.905 - - - potassium channel tetramerization domain containing 8 [Source:HGNC Symbol;Acc:HGNC:22394]
22. TRERF1 ENSGALG00000009896 42 0.903 - - - - - - 0.903 - - - transcriptional regulating factor 1 [Source:HGNC Symbol;Acc:HGNC:18273]
23. CHD5 ENSGALG00000000747 365 0.902 - - - - - - 0.902 - - - chromodomain helicase DNA binding protein 5, transcript variant X17
24. PLB1 PLB1 101 0.9 - - - - - - 0.900 - - -
25. KIAA1841 ENSGALG00000007825 22 0.9 - - - - - - 0.900 - - - KIAA1841 [Source:NCBI gene;Acc:421196]
26. IGF1R ENSGALG00000040651 772 0.897 - - - - - - 0.897 - - - insulin like growth factor 1 receptor [Source:NCBI gene;Acc:395889]
27. ATP2B2 ENSGALG00000030908 584 0.885 - - - - - - 0.885 - - - ATPase plasma membrane Ca2+ transporting 2 [Source:HGNC Symbol;Acc:HGNC:815]
28. COASY ENSGALG00000028866 41 0.884 - - - - 0.884 - - - - - Coenzyme A synthase [Source:HGNC Symbol;Acc:HGNC:29932]
29. ENSGALG00000027412 ENSGALG00000027412 202 0.882 - - - - - - 0.882 - - -
30. CCDC41 CCDC41 160 0.879 - - - - - - 0.879 - - -
31. ARID3A ENSGALG00000026231 867 0.879 - - - - - - 0.879 - - - AT-rich interaction domain 3A [Source:HGNC Symbol;Acc:HGNC:3031]
32. PFN2 313 0.878 - - - - - - 0.878 - - - profilin 2, transcript variant X2
33. WFDC2 ENSGALG00000031164 37 0.877 - - - - - - 0.877 - - - WAP four-disulfide core domain 2 [Source:HGNC Symbol;Acc:HGNC:15939]
34. TMEM178B ENSGALG00000028444 31 0.873 - - - - - - 0.873 - - - transmembrane protein 178B [Source:NCBI gene;Acc:418120]
35. ASIC2 ENSGALG00000000367 72 0.872 - - - - - - 0.872 - - - acid sensing ion channel subunit 2, transcript variant X2
36. SUZ12 ENSGALG00000003277 177 0.867 - - - - - - 0.867 - - - SUZ12, polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:17101]
37. FGL1 ENSGALG00000013606 42 0.861 - - - - - - 0.861 - - - fibrinogen like 1 [Source:NCBI gene;Acc:422728]
38. BMPR-II BMPR-II 33 0.861 - - - - - - 0.861 - - -
39. C11orf30 C11orf30 573 0.86 - - - - - - - 0.860 - -
40. BRIP1 ENSGALG00000005279 114 0.852 - - - - - - 0.852 - - - BRCA1 interacting protein C-terminal helicase 1 [Source:NCBI gene;Acc:417642]
41. RHOC ENSGALG00000001569 53 0.849 - - - - - - - 0.849 - - ras homolog family member C [Source:NCBI gene;Acc:395869]
42. DRC1 ENSGALG00000016591 174 0.846 - - - - - - 0.846 - - - dynein regulatory complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:24245]
43. GPC5 ENSGALG00000016902 47 0.845 - - - - - - 0.845 - - - glypican 5 [Source:HGNC Symbol;Acc:HGNC:4453]
44. GPR137B ENSGALG00000010843 69 0.845 - - - - - - - 0.845 - - G protein-coupled receptor 137B [Source:NCBI gene;Acc:421511]
45. GREB1L ENSGALG00000014935 88 0.844 - - - - - - 0.844 - - - GREB1 like retinoic acid receptor coactivator [Source:HGNC Symbol;Acc:HGNC:31042]
46. SACM1L ENSGALG00000040902 70 0.841 - - - - - - 0.841 - - - SAC1 like phosphatidylinositide phosphatase [Source:HGNC Symbol;Acc:HGNC:17059]
47. C1QB ENSGALG00000004771 368 0.838 - - - - - - - 0.838 - - complement C1q B chain [Source:HGNC Symbol;Acc:HGNC:1242]
48. CTSZ ENSGALG00000007462 630 0.838 - - - - - - 0.838 - - - cathepsin Z [Source:HGNC Symbol;Acc:HGNC:2547]
49. F10 ENSGALG00000026677 227 0.837 - - - - - - 0.837 - - - coagulation factor X [Source:NCBI gene;Acc:395876]
50. DUSP5 ENSGALG00000032618 195 0.835 - - - - - - - 0.835 - - dual specificity phosphatase 5 [Source:HGNC Symbol;Acc:HGNC:3071]
51. GLB1 ENSGALG00000040028 207 0.833 - - - - - - 0.833 - - - galactosidase beta 1 [Source:NCBI gene;Acc:420720]
52. MTOR ENSGALG00000003339 328 0.828 - - - - - - - 0.828 - - mechanistic target of rapamycin kinase [Source:HGNC Symbol;Acc:HGNC:3942]
53. DUSP21 ENSGALG00000007765 171 0.828 - - - - - - 0.828 - - - dual specificity phosphatase 21 [Source:HGNC Symbol;Acc:HGNC:20476]
54. DNAJB4 ENSGALG00000008916 68 0.824 - - - - - - 0.824 - - - DnaJ heat shock protein family (Hsp40) member B4 [Source:HGNC Symbol;Acc:HGNC:14886]
55. MFSD10 ENSGALG00000015652 211 0.82 - - - - - - 0.820 - - - major facilitator superfamily domain containing 10, transcript variant X4
56. RPRD2 ENSGALG00000014656 939 0.819 - - - - - - 0.819 - - - regulation of nuclear pre-mRNA domain containing 2 [Source:NCBI gene;Acc:425074]
57. BATF ENSGALG00000010323 96 0.818 - - - - - - 0.818 - - - basic leucine zipper ATF-like transcription factor [Source:HGNC Symbol;Acc:HGNC:958]
58. GEM ENSGALG00000032506 439 0.817 - - - - - - 0.817 - - - GTP binding protein overexpressed in skeletal muscle [Source:NCBI gene;Acc:404771]
59. LOC395991 ENSGALG00000006944 103 0.816 - - - - - - 0.816 - - - crescent, transcript variant X1
60. IFIH1 ENSGALG00000041192 78 0.814 - - - - - - 0.814 - - - interferon induced with helicase C domain 1 [Source:NCBI gene;Acc:424185]
61. LPCAT1 ENSGALG00000013189 197 0.811 - - - - - - 0.811 - - - lysophosphatidylcholine acyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:25718]
62. HACL1 ENSGALG00000011211 51 0.81 - - - - - - 0.810 - - - 2-hydroxyacyl-CoA lyase 1 [Source:NCBI gene;Acc:420638]
63. TDRD1 ENSGALG00000046180 612 0.809 - - - - - - 0.809 - - - tudor domain containing 1 [Source:HGNC Symbol;Acc:HGNC:11712]
64. TCF1 TCF1 72 0.808 - - - - - - 0.808 - - -
65. ENSGALG00000027945 ENSGALG00000027945 2 0.807 - - - 0.807 - - - - - -
66. AIFM3 ENSGALG00000007720 28 0.807 - - - 0.807 - - - - - - apoptosis inducing factor, mitochondria associated 3 [Source:HGNC Symbol;Acc:HGNC:26398]
67. TMEM56 ENSGALG00000005580 10 0.807 - - - 0.807 - - - - - - transmembrane protein 56 [Source:NCBI gene;Acc:424483]
68. P2RY4 ENSGALG00000004346 11 0.807 - - - 0.807 - - - - - - pyrimidinergic receptor P2Y4 [Source:HGNC Symbol;Acc:HGNC:8542]
69. B-BTN2 B-BTN2 1 0.807 - - - 0.807 - - - - - -
70. ENSGALG00000027164 ENSGALG00000027164 8 0.807 - - - 0.807 - - - - - -
71. GABRA4 ENSGALG00000014202 1 0.807 - - - 0.807 - - - - - - gamma-aminobutyric acid type A receptor alpha4 subunit [Source:HGNC Symbol;Acc:HGNC:4078]
72. C14orf159 C14orf159 7 0.807 - - - 0.807 - - - - - -
73. CSTA ENSGALG00000014412 422 0.807 - - - - - - 0.807 - - - cystatin A [Source:HGNC Symbol;Acc:HGNC:2481]
74. PDX1 ENSGALG00000038454 1 0.807 - - - 0.807 - - - - - - pancreatic and duodenal homeobox 1
75. ENSGALG00000028667 ENSGALG00000028667 1 0.807 - - - 0.807 - - - - - -
76. C15orf60 C15orf60 16 0.807 - - - 0.807 - - - - - -
77. C6orf58 ENSGALG00000045522 2 0.807 - - - 0.807 - - - - - - chromosome 6 open reading frame 58 [Source:HGNC Symbol;Acc:HGNC:20960]
78. TPP1 52 0.807 - - - 0.807 - - - - - - tripeptidyl peptidase 1
79. CRYBA2 ENSGALG00000011354 14 0.805 - - - 0.805 - - - - - - crystallin beta A2 [Source:NCBI gene;Acc:373999]
80. ENSGALG00000016441 ENSGALG00000016441 264 0.804 - - - - - - 0.804 - - -
81. KLHL17 ENSGALG00000002199 754 0.803 - - - - - - 0.803 - - - kelch like family member 17 [Source:HGNC Symbol;Acc:HGNC:24023]
82. PPM1M ENSGALG00000033277 556 0.801 - - - - - - 0.801 - - - protein phosphatase, Mg2+/Mn2+ dependent 1M [Source:NCBI gene;Acc:415941]
83. CRABP2 ENSGALG00000029140 559 0.8 - - - - - - 0.800 - - - cellular retinoic acid binding protein 2 [Source:HGNC Symbol;Acc:HGNC:2339]
84. MAP3K8 ENSGALG00000007356 188 0.797 - - - - - - 0.797 - - - mitogen-activated protein kinase kinase kinase 8 [Source:HGNC Symbol;Acc:HGNC:6860]
85. MT1 MT1 218 0.796 - - - - - - 0.796 - - -
86. LY86 ENSGALG00000012801 865 0.795 - - - - - - 0.795 - - - lymphocyte antigen 86 [Source:NCBI gene;Acc:420872]
87. GCLC ENSGALG00000016313 54 0.792 - - - - - - 0.792 - - - glutamate-cysteine ligase catalytic subunit [Source:HGNC Symbol;Acc:HGNC:4311]
88. IGF2 ENSGALG00000035282 513 0.792 - - - - - - 0.792 - - - insulin like growth factor 2 [Source:NCBI gene;Acc:395097]
89. SPRED2 ENSGALG00000008778 1475 0.791 - - - - - - 0.791 - - - sprouty related EVH1 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:17722]
90. MIEF2 ENSGALG00000005005 586 0.791 - - - - - - 0.791 - - - mitochondrial elongation factor 2 [Source:HGNC Symbol;Acc:HGNC:17920]
91. SPAG9 ENSGALG00000034001 2314 0.79 - - - - - - - 0.790 - - sperm associated antigen 9 [Source:HGNC Symbol;Acc:HGNC:14524]
92. WDR6 ENSGALG00000006936 175 0.785 - - - - - - 0.785 - - - WD repeat domain 6 [Source:HGNC Symbol;Acc:HGNC:12758]
93. AADAC ENSGALG00000010364 66 0.784 - - - - - - - 0.784 - - arylacetamide deacetylase [Source:HGNC Symbol;Acc:HGNC:17]
94. CLDN18 ENSGALG00000006593 77 0.784 - - - 0.784 - - - - - - claudin 18 [Source:HGNC Symbol;Acc:HGNC:2039]
95. NEURL NEURL 221 0.783 - - - - - - 0.783 - - -
96. B3GAT2 ENSGALG00000031590 615 0.782 - - - - - - 0.782 - - - beta-1,3-glucuronyltransferase 2 [Source:NCBI gene;Acc:428638]
97. LOC100858777 ENSGALG00000027624 58 0.777 - - - - - - 0.777 - - - rhodopsin, GQ-coupled-like
98. TRMT61B ENSGALG00000008979 615 0.774 - - - - - - 0.774 - - - tRNA methyltransferase 61B [Source:HGNC Symbol;Acc:HGNC:26070]
99. LOXL4 ENSGALG00000013090 9 0.772 - - - - 0.772 - - - - - lysyl oxidase like 4 [Source:HGNC Symbol;Acc:HGNC:17171]
100. SNORA53 SNORA53 6 0.772 - - - - 0.772 - - - - -

There are 64 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA