Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for CDV3

Gene Name Gene ID Reads Annotation
CDV3 ENSGALG00000032316 693 CDV3 homolog [Source:NCBI gene;Acc:420693]











Genes with expression patterns similar to CDV3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CDV3 ENSGALG00000032316 693 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 CDV3 homolog [Source:NCBI gene;Acc:420693]
2. CIDEC ENSGALG00000026945 718 1.645 - - 0.898 - - 0.747 - - - - cell death inducing DFFA like effector c [Source:NCBI gene;Acc:100859733]
3. PARS2 ENSGALG00000010789 2932 1.488 - - 0.765 - - - - - 0.723 - prolyl-tRNA synthetase 2, mitochondrial (putative) [Source:NCBI gene;Acc:424659]
4. POLR3B ENSGALG00000012655 704 1.479 - - - - - - - 0.750 0.729 - Gallus gallus RNA polymerase III subunit B (POLR3B), mRNA. [Source:RefSeq mRNA;Acc:NM_001321490]
5. FBXO34 ENSGALG00000032563 656 0.951 - - 0.951 - - - - - - - F-box protein 34 [Source:NCBI gene;Acc:423554]
6. TMEM97 ENSGALG00000005702 2037 0.947 - - 0.947 - - - - - - - transmembrane protein 97 [Source:HGNC Symbol;Acc:HGNC:28106]
7. IP6K1 ENSGALG00000002510 827 0.946 - - 0.946 - - - - - - - inositol hexakisphosphate kinase 1 [Source:HGNC Symbol;Acc:HGNC:18360]
8. MGMT ENSGALG00000042949 53 0.945 - - 0.945 - - - - - - - O-6-methylguanine-DNA methyltransferase [Source:HGNC Symbol;Acc:HGNC:7059]
9. ZNF423 ENSGALG00000003891 103 0.945 - - 0.945 - - - - - - - zinc finger protein 423 [Source:HGNC Symbol;Acc:HGNC:16762]
10. TMEM38B ENSGALG00000027472 2465 0.944 - - 0.944 - - - - - - - transmembrane protein 38B [Source:HGNC Symbol;Acc:HGNC:25535]
11. PLEKHG5 ENSGALG00000027476 42 0.943 - - 0.943 - - - - - - - pleckstrin homology and RhoGEF domain containing G5 [Source:HGNC Symbol;Acc:HGNC:29105]
12. POMC ENSGALG00000016600 99 0.943 - - 0.943 - - - - - - - proopiomelanocortin [Source:NCBI gene;Acc:422011]
13. GRIK3 ENSGALG00000002098 111 0.943 - - 0.943 - - - - - - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
14. RHOC ENSGALG00000001569 53 0.943 - - 0.943 - - - - - - - ras homolog family member C [Source:NCBI gene;Acc:395869]
15. TRIM45 ENSGALG00000014818 1258 0.942 - - 0.942 - - - - - - - tripartite motif containing 45 [Source:HGNC Symbol;Acc:HGNC:19018]
16. ENSGALG00000023180 ENSGALG00000023180 83 0.942 - - 0.942 - - - - - - -
17. KIAA0195 KIAA0195 48 0.942 - - 0.942 - - - - - - -
18. ZEB2 ENSGALG00000040465 315 0.942 - - 0.942 - - - - - - - Gallus gallus zinc finger E-box binding homeobox 2 (ZEB2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318466]
19. LYPD6B ENSGALG00000028759 831 0.94 - - 0.940 - - - - - - - LY6/PLAUR domain containing 6B [Source:HGNC Symbol;Acc:HGNC:27018]
20. ADAMTS2 ENSGALG00000032974 141 0.94 - - 0.940 - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif 2 [Source:HGNC Symbol;Acc:HGNC:218]
21. LGALS3 ENSGALG00000012173 3306 0.94 - - 0.940 - - - - - - - galectin 3 [Source:NCBI gene;Acc:373917]
22. DLX5 ENSGALG00000009129 1395 0.939 - - 0.939 - - - - - - - distal-less homeobox 5 [Source:NCBI gene;Acc:373969]
23. RAB3B ENSGALG00000010567 894 0.939 - - 0.939 - - - - - - - RAB3B, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9778]
24. MT1 MT1 218 0.939 - - 0.939 - - - - - - -
25. ACOT9 ENSGALG00000016351 330 0.938 - - 0.938 - - - - - - - acyl-CoA thioesterase 9 [Source:NCBI gene;Acc:418600]
26. ZOV3 ZOV3 3267 0.937 - - 0.937 - - - - - - -
27. YLPM1 671 0.937 - - 0.937 - - - - - - - YLP motif containing 1
28. WDR89 ENSGALG00000011827 1481 0.936 - - 0.936 - - - - - - - WD repeat domain 89 [Source:NCBI gene;Acc:423510]
29. INTS9 ENSGALG00000016631 742 0.936 - - 0.936 - - - - - - - integrator complex subunit 9 [Source:NCBI gene;Acc:422023]
30. PHF2 ENSGALG00000039208 2003 0.935 - - 0.935 - - - - - - - PHD finger protein 2 [Source:HGNC Symbol;Acc:HGNC:8920]
31. SLC4A4 ENSGALG00000031105 534 0.935 - - 0.935 - - - - - - - solute carrier family 4 member 4 [Source:HGNC Symbol;Acc:HGNC:11030]
32. AP3M1 ENSGALG00000005070 712 0.934 - - 0.934 - - - - - - - adaptor related protein complex 3 subunit mu 1 [Source:NCBI gene;Acc:423736]
33. SDCBP ENSGALG00000015436 1228 0.933 - - 0.933 - - - - - - - syndecan binding protein [Source:NCBI gene;Acc:421136]
34. PKP4 ENSGALG00000012561 3087 0.932 - - 0.932 - - - - - - - plakophilin 4 [Source:NCBI gene;Acc:424328]
35. MPG ENSGALG00000028691 1874 0.932 - - 0.932 - - - - - - - N-methylpurine DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:7211]
36. ALG14 ENSGALG00000005583 2008 0.931 - - 0.931 - - - - - - - ALG14, UDP-N-acetylglucosaminyltransferase subunit [Source:NCBI gene;Acc:424484]
37. NCAPD3 ENSGALG00000001491 221 0.931 - - 0.931 - - - - - - - non-SMC condensin II complex subunit D3, transcript variant X3
38. MAN1A1 ENSGALG00000014878 1061 0.93 - - 0.930 - - - - - - - mannosidase alpha class 1A member 1 [Source:HGNC Symbol;Acc:HGNC:6821]
39. GOLGA2 ENSGALG00000004881 677 0.929 - - 0.929 - - - - - - - golgin A2, transcript variant X7
40. ATP2B2 ENSGALG00000030908 584 0.929 - - 0.929 - - - - - - - ATPase plasma membrane Ca2+ transporting 2 [Source:HGNC Symbol;Acc:HGNC:815]
41. CASP1 ENSGALG00000001049 1067 0.929 - - 0.929 - - - - - - - caspase 1, transcript variant X2
42. FBF1 ENSGALG00000002179 1738 0.928 - - 0.928 - - - - - - - Fas binding factor 1 [Source:NCBI gene;Acc:770159]
43. TSEN2 ENSGALG00000004981 1929 0.927 - - 0.927 - - - - - - - tRNA splicing endonuclease subunit 2 [Source:NCBI gene;Acc:415965]
44. BMP2 ENSGALG00000029301 379 0.927 - - 0.927 - - - - - - - bone morphogenetic protein 2 [Source:NCBI gene;Acc:378779]
45. RASSF8 ENSGALG00000014041 850 0.926 - - 0.926 - - - - - - - Ras association domain family member 8 [Source:HGNC Symbol;Acc:HGNC:13232]
46. SORCS1 ENSGALG00000008465 468 0.925 - - 0.925 - - - - - - - sortilin related VPS10 domain containing receptor 1 [Source:HGNC Symbol;Acc:HGNC:16697]
47. LRP2 ENSGALG00000010858 363 0.925 - - 0.925 - - - - - - - LDL receptor related protein 2 [Source:HGNC Symbol;Acc:HGNC:6694]
48. CCDC25 ENSGALG00000016586 351 0.925 - - 0.925 - - - - - - - coiled-coil domain containing 25 [Source:HGNC Symbol;Acc:HGNC:25591]
49. TXNDC12 ENSGALG00000010569 13822 0.925 - - 0.925 - - - - - - - thioredoxin domain containing 12 [Source:NCBI gene;Acc:772208]
50. RPUSD1 ENSGALG00000005315 651 0.924 - - 0.924 - - - - - - - RNA pseudouridylate synthase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:14173]
51. LRR1 ENSGALG00000012230 1062 0.923 - - 0.923 - - - - - - - leucine rich repeat protein 1 [Source:HGNC Symbol;Acc:HGNC:19742]
52. C8H1ORF52 C8H1ORF52 118 0.921 - - 0.921 - - - - - - -
53. GBGT1 ENSGALG00000003340 399 0.921 - - 0.921 - - - - - - - globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group) [Source:NCBI gene;Acc:417163]
54. ENTPD5 ENSGALG00000010202 69 0.92 - - 0.920 - - - - - - - ectonucleoside triphosphate diphosphohydrolase 5 [Source:HGNC Symbol;Acc:HGNC:3367]
55. TTC39A ENSGALG00000010540 1025 0.917 - - 0.917 - - - - - - - tetratricopeptide repeat domain 39A [Source:HGNC Symbol;Acc:HGNC:18657]
56. CCT8 ENSGALG00000015821 12161 0.916 - - 0.916 - - - - - - - chaperonin containing TCP1 subunit 8 [Source:NCBI gene;Acc:418486]
57. LMO4 ENSGALG00000006252 3686 0.915 - - 0.915 - - - - - - - LIM domain only 4 [Source:NCBI gene;Acc:373901]
58. MYO18A ENSGALG00000003741 1023 0.914 - - 0.914 - - - - - - - myosin XVIIIA [Source:HGNC Symbol;Acc:HGNC:31104]
59. LHFP 167 0.913 - - 0.913 - - - - - - - lipoma HMGIC fusion partner
60. SYBU ENSGALG00000036527 1221 0.913 - - 0.913 - - - - - - - syntabulin [Source:HGNC Symbol;Acc:HGNC:26011]
61. GNMT ENSGALG00000043290 3288 0.913 - - 0.913 - - - - - - - glycine N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:4415]
62. EXTL2 ENSGALG00000027984 808 0.913 - - 0.913 - - - - - - - exostosin like glycosyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:3516]
63. USP40 ENSGALG00000004228 1137 0.912 - - 0.912 - - - - - - - ubiquitin specific peptidase 40 [Source:NCBI gene;Acc:100859211]
64. PDCD4 ENSGALG00000008700 574 0.911 - - 0.911 - - - - - - - programmed cell death 4 [Source:NCBI gene;Acc:374191]
65. DDX18 ENSGALG00000012147 12463 0.911 - - 0.911 - - - - - - - DEAD-box helicase 18 [Source:HGNC Symbol;Acc:HGNC:2741]
66. CXorf30 CXorf30 172 0.911 - - 0.911 - - - - - - -
67. SULT2B1L1 ENSGALG00000023472 569 0.91 - - 0.910 - - - - - - - sulfotransferase family cytosolic 2B member 1-like 1
68. C19H17ORF85 C19H17ORF85 2538 0.909 - - 0.909 - - - - - - -
69. WDR11 ENSGALG00000035013 3393 0.909 - - 0.909 - - - - - - - WD repeat domain 11 [Source:HGNC Symbol;Acc:HGNC:13831]
70. KLHL15 ENSGALG00000016345 1638 0.909 - - 0.909 - - - - - - - kelch like family member 15 [Source:NCBI gene;Acc:418598]
71. MAK16 ENSGALG00000001663 7455 0.909 - - 0.909 - - - - - - - MAK16 homolog [Source:HGNC Symbol;Acc:HGNC:13703]
72. PCP4 ENSGALG00000022819 880 0.909 - - 0.909 - - - - - - - Purkinje cell protein 4 [Source:NCBI gene;Acc:771220]
73. TBPL1 ENSGALG00000013981 3710 0.908 - - 0.908 - - - - - - - TATA-box binding protein like 1 [Source:NCBI gene;Acc:395517]
74. EIF2AK2 ENSGALG00000010560 749 0.907 - - 0.907 - - - - - - - eukaryotic translation initiation factor 2 alpha kinase 2 [Source:NCBI gene;Acc:395147]
75. DZIP1 ENSGALG00000016895 681 0.905 - - 0.905 - - - - - - - DAZ interacting zinc finger protein 1 [Source:HGNC Symbol;Acc:HGNC:20908]
76. ATG10 ENSGALG00000027714 1100 0.903 - - 0.903 - - - - - - - autophagy related 10 [Source:HGNC Symbol;Acc:HGNC:20315]
77. FRMD3 ENSGALG00000012577 999 0.903 - - 0.903 - - - - - - - FERM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24125]
78. PHIP ENSGALG00000015889 2348 0.903 - - 0.903 - - - - - - - pleckstrin homology domain interacting protein [Source:HGNC Symbol;Acc:HGNC:15673]
79. C5orf30 ENSGALG00000027512 1721 0.903 - - 0.903 - - - - - - - chromosome 5 open reading frame 30 [Source:HGNC Symbol;Acc:HGNC:25052]
80. AGPAT9 AGPAT9 1823 0.902 - - 0.902 - - - - - - -
81. SYNCRIP ENSGALG00000015830 30555 0.901 - - 0.901 - - - - - - - synaptotagmin binding cytoplasmic RNA interacting protein [Source:NCBI gene;Acc:421831]
82. Sep-02 Sep-02 206 0.9 - - 0.900 - - - - - - -
83. B3GNT7 ENSGALG00000007701 929 0.899 - - 0.899 - - - - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:18811]
84. LZIC ENSGALG00000002616 9052 0.899 - - 0.899 - - - - - - - leucine zipper and CTNNBIP1 domain containing [Source:NCBI gene;Acc:419445]
85. AMMECR1L ENSGALG00000026728 2134 0.897 - - 0.897 - - - - - - - AMMECR1 like [Source:HGNC Symbol;Acc:HGNC:28658]
86. PSMC5 ENSGALG00000000349 21346 0.897 - - 0.897 - - - - - - - proteasome 26S subunit, ATPase 5 [Source:NCBI gene;Acc:428274]
87. VRTN ENSGALG00000010232 692 0.897 - - 0.897 - - - - - - - vertebrae development associated [Source:HGNC Symbol;Acc:HGNC:20223]
88. DAPK3 ENSGALG00000037733 6215 0.897 - - 0.897 - - - - - - - death-associated protein kinase 3, transcript variant X2
89. SCPEP1 ENSGALG00000003185 2322 0.896 - - 0.896 - - - - - - - serine carboxypeptidase 1 [Source:NCBI gene;Acc:417403]
90. BCCIP ENSGALG00000006617 13291 0.895 - - 0.895 - - - - - - - BRCA2 and CDKN1A interacting protein [Source:HGNC Symbol;Acc:HGNC:978]
91. ZNF395 ENSGALG00000034140 1868 0.895 - - 0.895 - - - - - - - zinc finger protein 395 [Source:HGNC Symbol;Acc:HGNC:18737]
92. CLN8 ENSGALG00000039606 4209 0.895 - - 0.895 - - - - - - - CLN8, transmembrane ER and ERGIC protein [Source:NCBI gene;Acc:421902]
93. ZNF276 ENSGALG00000000513 2410 0.895 - - 0.895 - - - - - - - zinc finger protein 276 [Source:HGNC Symbol;Acc:HGNC:23330]
94. FAM178A FAM178A 2738 0.894 - - 0.894 - - - - - - -
95. WBSCR17 581 0.894 - - 0.894 - - - - - - - Williams-Beuren syndrome chromosome region 17, transcript variant X1
96. INPP5F ENSGALG00000009445 1911 0.893 - - 0.893 - - - - - - - inositol polyphosphate-5-phosphatase F [Source:HGNC Symbol;Acc:HGNC:17054]
97. TMEM104 ENSGALG00000007747 2390 0.893 - - 0.893 - - - - - - - transmembrane protein 104 [Source:NCBI gene;Acc:422110]
98. FBXL17 ENSGALG00000000276 2443 0.893 - - 0.893 - - - - - - - F-box and leucine rich repeat protein 17 [Source:HGNC Symbol;Acc:HGNC:13615]
99. FZD2 ENSGALG00000030847 3286 0.893 - - 0.893 - - - - - - - frizzled class receptor 2 [Source:NCBI gene;Acc:374061]
100. MSRA ENSGALG00000028032 2607 0.892 - - 0.892 - - - - - - - methionine sulfoxide reductase A [Source:HGNC Symbol;Acc:HGNC:7377]

There are 327 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA