Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CDT1

Gene Name Gene ID Reads Annotation
CDT1 ENSGALG00000013784 6801 chromatin licensing and DNA replication factor 1 [Source:HGNC Symbol;Acc:HGNC:24576]











Genes with expression patterns similar to CDT1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CDT1 ENSGALG00000013784 6801 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 chromatin licensing and DNA replication factor 1 [Source:HGNC Symbol;Acc:HGNC:24576]
2. CENPO ENSGALG00000016609 1699 1.592 - - 0.789 - - - - 0.803 - - centromere protein O [Source:NCBI gene;Acc:422014]
3. MIB1 ENSGALG00000014974 3583 1.533 - - 0.808 - - - 0.725 - - - mindbomb E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21086]
4. ZNF335 ENSGALG00000041370 4740 1.531 - - 0.741 - - - - 0.790 - - zinc finger protein 335 [Source:NCBI gene;Acc:396131]
5. FAM63B 3793 1.496 - - - - - - 0.746 0.750 - - family with sequence similarity 63 member B
6. AGFG1 ENSGALG00000003052 4766 1.488 - - 0.766 - - - 0.722 - - - ArfGAP with FG repeats 1 [Source:HGNC Symbol;Acc:HGNC:5175]
7. KLHL21 ENSGALG00000035211 6145 1.483 - - - - - - 0.743 0.740 - - kelch like family member 21 [Source:HGNC Symbol;Acc:HGNC:29041]
8. WSB2 ENSGALG00000008151 13246 1.472 - - - - - - 0.734 0.738 - - WD repeat and SOCS box containing 2 [Source:HGNC Symbol;Acc:HGNC:19222]
9. TLE1 ENSGALG00000012575 2047 1.463 - - 0.751 - - - - 0.712 - - transducin like enhancer of split 1 [Source:HGNC Symbol;Acc:HGNC:11837]
10. PTTG1 17936 1.441 - - 0.711 - - - 0.730 - - - pituitary tumor-transforming 1, transcript variant X1
11. BMS1 ENSGALG00000002624 8339 1.43 - - 0.724 - - - 0.706 - - - BMS1, ribosome biogenesis factor [Source:NCBI gene;Acc:423633]
12. NUPL1 NUPL1 8197 1.43 - - 0.724 - - - 0.706 - - -
13. WTAP ENSGALG00000011660 10811 0.841 - - 0.841 - - - - - - - WT1 associated protein [Source:HGNC Symbol;Acc:HGNC:16846]
14. OTUD6B ENSGALG00000041337 15657 0.831 - - 0.831 - - - - - - - OTU domain containing 6B [Source:NCBI gene;Acc:420222]
15. HNRNPLL ENSGALG00000008504 14719 0.83 - - 0.830 - - - - - - - heterogeneous nuclear ribonucleoprotein L like [Source:NCBI gene;Acc:416702]
16. SETD1B ENSGALG00000004324 2897 0.828 - - 0.828 - - - - - - - SET domain containing 1B [Source:NCBI gene;Acc:416851]
17. ADSS ENSGALG00000010702 7207 0.826 - - - - - - - 0.826 - - adenylosuccinate synthase [Source:NCBI gene;Acc:428579]
18. XRCC6 ENSGALG00000011932 2302 0.825 - - 0.825 - - - - - - - X-ray repair complementing defective repair in Chinese hamster cells 6 [Source:NCBI gene;Acc:395767]
19. AIFM1 ENSGALG00000004003 10451 0.825 - - - - - - - 0.825 - - apoptosis inducing factor mitochondria associated 1 [Source:NCBI gene;Acc:428688]
20. CHAMP1 ENSGALG00000016813 508 0.823 - - 0.823 - - - - - - - chromosome alignment maintaining phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:20311]
21. NOTCH2 ENSGALG00000002922 3272 0.821 - - - - - - - 0.821 - - notch 2 [Source:NCBI gene;Acc:374031]
22. HDHD2 ENSGALG00000034801 6373 0.818 - - 0.818 - - - - - - - haloacid dehalogenase like hydrolase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25364]
23. FAM172A ENSGALG00000014661 10565 0.817 - - - - - - - 0.817 - - family with sequence similarity 172 member A [Source:NCBI gene;Acc:427109]
24. TMEM242 ENSGALG00000013689 377 0.816 - - 0.816 - - - - - - - transmembrane protein 242 [Source:HGNC Symbol;Acc:HGNC:17206]
25. LRRC71 ENSGALG00000027351 695 0.813 - - 0.813 - - - - - - - leucine rich repeat containing 71 [Source:HGNC Symbol;Acc:HGNC:26556]
26. C18orf8 C18orf8 1512 0.812 - - 0.812 - - - - - - -
27. GDPD4 ENSGALG00000000690 824 0.812 - - 0.812 - - - - - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
28. PEMT ENSGALG00000004875 4094 0.811 - - 0.811 - - - - - - - phosphatidylethanolamine N-methyltransferase [Source:NCBI gene;Acc:416508]
29. CHD7 ENSGALG00000041080 10201 0.81 - - - - - - 0.810 - - - chromodomain helicase DNA binding protein 7 [Source:NCBI gene;Acc:421140]
30. FAM134C 860 0.809 - - 0.809 - - - - - - - family with sequence similarity 134 member C
31. CEP19 ENSGALG00000006405 1645 0.808 - - - - - - - 0.808 - - centrosomal protein 19 [Source:NCBI gene;Acc:424858]
32. LRRC42 ENSGALG00000010743 384 0.808 - - 0.808 - - - - - - - leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:HGNC:28792]
33. CASK ENSGALG00000042400 8485 0.808 - - - - - - 0.808 - - - calcium/calmodulin dependent serine protein kinase [Source:HGNC Symbol;Acc:HGNC:1497]
34. ENSGALG00000002020 ENSGALG00000002020 183 0.807 - - 0.807 - - - - - - -
35. ITM2B ENSGALG00000016996 1112 0.807 - - 0.807 - - - - - - - integral membrane protein 2B [Source:NCBI gene;Acc:395969]
36. RECQL ENSGALG00000013174 1323 0.807 - - 0.807 - - - - - - - RecQ like helicase [Source:NCBI gene;Acc:378910]
37. RQCD1 RQCD1 110 0.806 - - 0.806 - - - - - - -
38. TDRD6 48 0.806 - - 0.806 - - - - - - - tudor domain containing 6
39. ITGB4 ENSGALG00000002389 44 0.806 - - 0.806 - - - - - - - integrin subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:6158]
40. ATPAF2 ENSGALG00000004926 3393 0.806 - - - - - - - 0.806 - - ATP synthase mitochondrial F1 complex assembly factor 2 [Source:HGNC Symbol;Acc:HGNC:18802]
41. MRC2 ENSGALG00000000461 48 0.806 - - 0.806 - - - - - - - mannose receptor C type 2 [Source:HGNC Symbol;Acc:HGNC:16875]
42. UEVLD ENSGALG00000006342 164 0.805 - - 0.805 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:NCBI gene;Acc:100858486]
43. ENSGALG00000004703 ENSGALG00000004703 112 0.805 - - 0.805 - - - - - - -
44. ENSGALG00000008689 ENSGALG00000008689 232 0.805 - - 0.805 - - - - - - -
45. CDC14B ENSGALG00000012627 110 0.805 - - 0.805 - - - - - - - Gallus gallus cell division cycle 14B (CDC14B), mRNA. [Source:RefSeq mRNA;Acc:NM_001318405]
46. RFK ENSGALG00000033558 1364 0.805 - - 0.805 - - - - - - - riboflavin kinase, transcript variant X3
47. ENSGALG00000028964 ENSGALG00000028964 46 0.805 - - 0.805 - - - - - - -
48. SLC3A1 ENSGALG00000009973 608 0.804 - - 0.804 - - - - - - - solute carrier family 3 member 1 [Source:HGNC Symbol;Acc:HGNC:11025]
49. SENP6 ENSGALG00000015901 8013 0.804 - - 0.804 - - - - - - - SUMO specific peptidase 6 [Source:HGNC Symbol;Acc:HGNC:20944]
50. FAM168B ENSGALG00000002172 12162 0.804 - - 0.804 - - - - - - - family with sequence similarity 168 member B [Source:HGNC Symbol;Acc:HGNC:27016]
51. RPS6KB1 ENSGALG00000005198 169 0.804 - - 0.804 - - - - - - - ribosomal protein S6 kinase B1 [Source:NCBI gene;Acc:417637]
52. FBXL5 ENSGALG00000014510 245 0.803 - - 0.803 - - - - - - - F-box and leucine rich repeat protein 5 [Source:HGNC Symbol;Acc:HGNC:13602]
53. NACAD 679 0.802 - - 0.802 - - - - - - - NAC alpha domain containing, transcript variant X1
54. AKAP10 ENSGALG00000004679 103 0.802 - - 0.802 - - - - - - - A-kinase anchoring protein 10 [Source:HGNC Symbol;Acc:HGNC:368]
55. RAD54L2 ENSGALG00000003243 187 0.802 - - 0.802 - - - - - - - RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
56. U4 U4 69 0.802 - - 0.802 - - - - - - -
57. ENSGALG00000020103 ENSGALG00000020103 64 0.802 - - 0.802 - - - - - - -
58. PTDSS2 ENSGALG00000004300 682 0.802 - - 0.802 - - - - - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
59. RTN4 ENSGALG00000029261 45730 0.801 - - 0.801 - - - - - - - reticulon 4 [Source:NCBI gene;Acc:378790]
60. F2R ENSGALG00000014983 106 0.801 - - 0.801 - - - - - - - coagulation factor II thrombin receptor [Source:HGNC Symbol;Acc:HGNC:3537]
61. L3MBTL3 ENSGALG00000034030 113 0.801 - - 0.801 - - - - - - - L3MBTL3, histone methyl-lysine binding protein [Source:HGNC Symbol;Acc:HGNC:23035]
62. SZT2 ENSGALG00000028561 255 0.8 - - 0.800 - - - - - - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
63. PPME1 ENSGALG00000017312 2634 0.8 - - 0.800 - - - - - - - protein phosphatase methylesterase 1 [Source:NCBI gene;Acc:419058]
64. MED12 ENSGALG00000036322 814 0.8 - - 0.800 - - - - - - - mediator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:11957]
65. MSH2 ENSGALG00000008962 9709 0.8 - - - - - - - 0.800 - - mutS homolog 2 [Source:HGNC Symbol;Acc:HGNC:7325]
66. CLEC16A ENSGALG00000007167 66 0.8 - - 0.800 - - - - - - - C-type lectin domain containing 16A [Source:HGNC Symbol;Acc:HGNC:29013]
67. GTF2H2 ENSGALG00000002399 2361 0.799 - - 0.799 - - - - - - - general transcription factor IIH subunit 2, transcript variant X2
68. DBN1 ENSGALG00000033405 216 0.799 - - 0.799 - - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
69. NXPE3 ENSGALG00000015344 111 0.799 - - 0.799 - - - - - - - neurexophilin and PC-esterase domain family member 3 [Source:HGNC Symbol;Acc:HGNC:28238]
70. CCDC126 ENSGALG00000010976 1892 0.799 - - - - - - - 0.799 - - coiled-coil domain containing 126 [Source:HGNC Symbol;Acc:HGNC:22398]
71. TRIM13 ENSGALG00000017011 92 0.798 - - 0.798 - - - - - - - tripartite motif containing 13 [Source:HGNC Symbol;Acc:HGNC:9976]
72. STAMBP ENSGALG00000042555 1362 0.798 - - 0.798 - - - - - - - STAM binding protein [Source:HGNC Symbol;Acc:HGNC:16950]
73. TCTN2 ENSGALG00000023683 3596 0.797 - - 0.797 - - - - - - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
74. MLLT3 ENSGALG00000015078 502 0.796 - - 0.796 - - - - - - - MLLT3, super elongation complex subunit [Source:HGNC Symbol;Acc:HGNC:7136]
75. OSGIN2 ENSGALG00000042840 83 0.796 - - 0.796 - - - - - - - oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]
76. RAB10 ENSGALG00000016535 5272 0.796 - - 0.796 - - - - - - - RAB10, member RAS oncogene family [Source:NCBI gene;Acc:421994]
77. CLNS1A ENSGALG00000008574 25675 0.796 - - - - - - 0.796 - - - chloride nucleotide-sensitive channel 1A [Source:HGNC Symbol;Acc:HGNC:2080]
78. FAR-1 FAR-1 1855 0.796 - - 0.796 - - - - - - -
79. DDX49 ENSGALG00000003130 5216 0.796 - - - - - - - 0.796 - - DEAD-box helicase 49 [Source:NCBI gene;Acc:420116]
80. SMARCAD1 ENSGALG00000037339 149 0.795 - - 0.795 - - - - - - - SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Source:HGNC Symbol;Acc:HGNC:18398]
81. CHGA ENSGALG00000010820 1028 0.795 - - 0.795 - - - - - - - chromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]
82. ABCC3 ENSGALG00000007522 340 0.795 - - 0.795 - - - - - - - ATP binding cassette subfamily C member 3, transcript variant X5
83. FBXO45 ENSGALG00000037281 3936 0.795 - - 0.795 - - - - - - - F-box protein 45 [Source:HGNC Symbol;Acc:HGNC:29148]
84. PRKACB ENSGALG00000028530 12506 0.794 - - 0.794 - - - - - - - protein kinase cAMP-activated catalytic subunit beta, transcript variant X2
85. ATP8B4 ENSGALG00000002326 456 0.794 - - 0.794 - - - - - - - ATPase phospholipid transporting 8B4 (putative), transcript variant X4
86. ADK ENSGALG00000005057 199 0.794 - - 0.794 - - - - - - - adenosine kinase [Source:NCBI gene;Acc:423735]
87. DHFR ENSGALG00000026757 18478 0.794 - - 0.794 - - - - - - - dihydrofolate reductase [Source:NCBI gene;Acc:427317]
88. GGA.31975 GGA.31975 8825 0.793 - - - - - - 0.793 - - -
89. BAG5 ENSGALG00000031062 4498 0.793 - - 0.793 - - - - - - - BCL2 associated athanogene 5 [Source:NCBI gene;Acc:423482]
90. ADIPOR2 ENSGALG00000035533 6523 0.793 - - 0.793 - - - - - - - adiponectin receptor 2 [Source:NCBI gene;Acc:418155]
91. RUVBL1 ENSGALG00000005931 9379 0.793 - - - - - - 0.793 - - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
92. BBS5 ENSGALG00000009846 344 0.793 - - 0.793 - - - - - - - Bardet-Biedl syndrome 5 [Source:NCBI gene;Acc:424165]
93. TAF3 ENSGALG00000006731 15569 0.792 - - - - - - 0.792 - - - TATA-box binding protein associated factor 3 [Source:NCBI gene;Acc:419107]
94. AK2 ENSGALG00000003597 1415 0.791 - - - - - - - 0.791 - - adenylate kinase 2 [Source:HGNC Symbol;Acc:HGNC:362]
95. LPCAT3 ENSGALG00000014570 7919 0.791 - - 0.791 - - - - - - - lysophosphatidylcholine acyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:30244]
96. USP7 ENSGALG00000007307 2973 0.79 - - - - - - - 0.790 - - ubiquitin specific peptidase 7 [Source:NCBI gene;Acc:395126]
97. IGF2BP3 ENSGALG00000010961 81524 0.79 - - 0.790 - - - - - - - insulin like growth factor 2 mRNA binding protein 3 [Source:NCBI gene;Acc:420617]
98. RALGAPA2 240 0.79 - - 0.790 - - - - - - - Ral GTPase activating protein, alpha subunit 2 (catalytic), transcript variant X6
99. PRUNE PRUNE 452 0.789 - - 0.789 - - - - - - -
100. TAF1B ENSGALG00000016437 2318 0.789 - - 0.789 - - - - - - - TATA-box binding protein associated factor, RNA polymerase I subunit B [Source:NCBI gene;Acc:421933]

There are 499 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA