Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CDR2

Gene Name Gene ID Reads Annotation
CDR2 ENSGALG00000025743 145 cerebellar degeneration related protein 2 [Source:NCBI gene;Acc:416621]











Genes with expression patterns similar to CDR2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CDR2 ENSGALG00000025743 145 7 - 1.000 1.000 1.000 1.000 1.000 - 1.000 - 1.000 cerebellar degeneration related protein 2 [Source:NCBI gene;Acc:416621]
2. PPP4R1L 15 1 - - - - 1.000 - - - - - protein phosphatase 4, regulatory subunit 1-like, transcript variant X2
3. TLR7 ENSGALG00000016590 6 1 - - - - 1.000 - - - - - toll like receptor 7 [Source:NCBI gene;Acc:418638]
4. AGT ENSGALG00000011117 7 1 - - - - 1.000 - - - - - angiotensinogen [Source:HGNC Symbol;Acc:HGNC:333]
5. FAM46B 21 1 - - - - 1.000 - - - - - family with sequence similarity 46 member B
6. OTUD7B ENSGALG00000013348 38 1 - - - - 1.000 - - - - - OTU deubiquitinase 7B [Source:HGNC Symbol;Acc:HGNC:16683]
7. IGFBP2 ENSGALG00000011469 26 1 - - - - 1.000 - - - - - insulin like growth factor binding protein 2 [Source:NCBI gene;Acc:396315]
8. LOXL4 ENSGALG00000013090 9 1 - - - - 1.000 - - - - - lysyl oxidase like 4 [Source:HGNC Symbol;Acc:HGNC:17171]
9. SNORA53 SNORA53 6 1 - - - - 1.000 - - - - -
10. HOPX ENSGALG00000011404 10 1 - - - - 1.000 - - - - - HOP homeobox [Source:NCBI gene;Acc:395241]
11. SNORA81 SNORA81 15 1 - - - - 1.000 - - - - -
12. RAB7L1 RAB7L1 1 1 - - - - 1.000 - - - - -
13. STX3 ENSGALG00000035153 1 1 - - - - 1.000 - - - - - syntaxin 3
14. C3orf83 C3orf83 117 1 - - - - 1.000 - - - - -
15. MXI1 ENSGALG00000008555 4 1 - - - - 1.000 - - - - - MAX interactor 1, dimerization protein [Source:NCBI gene;Acc:423888]
16. PCYT1B 190 0.89 - - - - - - - 0.890 - - phosphate cytidylyltransferase 1, choline, beta, transcript variant X4
17. PRKCB ENSGALG00000037943 29 0.863 - - - - 0.863 - - - - - protein kinase C beta [Source:HGNC Symbol;Acc:HGNC:9395]
18. TDRP ENSGALG00000016356 36 0.842 - - - - 0.842 - - - - - testis development related protein [Source:HGNC Symbol;Acc:HGNC:26951]
19. PLAU ENSGALG00000005086 86 0.835 - - - - - - - 0.835 - - plasminogen activator, urokinase [Source:NCBI gene;Acc:396424]
20. OBSL1 ENSGALG00000011242 22 0.834 - - - - - 0.834 - - - - obscurin like 1 [Source:HGNC Symbol;Acc:HGNC:29092]
21. TMEFF2 ENSGALG00000007759 93 0.827 - - - - - - - 0.827 - - transmembrane protein with EGF like and two follistatin like domains 2 [Source:HGNC Symbol;Acc:HGNC:11867]
22. SLC35A3 12 0.821 - - - - - 0.821 - - - - solute carrier family 35 member A3, transcript variant X7
23. ENSGALG00000024018 ENSGALG00000024018 37 0.818 - - - - - - - - - 0.818
24. ARSG ENSGALG00000004193 21 0.816 - - - - - - - 0.816 - - arylsulfatase G [Source:NCBI gene;Acc:771433]
25. COBLL1 ENSGALG00000011068 111 0.816 - - - - - - - 0.816 - - cordon-bleu WH2 repeat protein like 1 [Source:HGNC Symbol;Acc:HGNC:23571]
26. LTBP2 ENSGALG00000010258 1891 0.811 - - - - - - - 0.811 - - latent transforming growth factor beta binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6715]
27. NMRK1 ENSGALG00000015156 88 0.807 - - - - - - - 0.807 - - nicotinamide riboside kinase 1 [Source:HGNC Symbol;Acc:HGNC:26057]
28. TGFBRAP1 ENSGALG00000016795 81 0.803 - - - - - 0.803 - - - - transforming growth factor beta receptor associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16836]
29. MGMT ENSGALG00000042949 53 0.8 - - - - - - - 0.800 - - O-6-methylguanine-DNA methyltransferase [Source:HGNC Symbol;Acc:HGNC:7059]
30. ENSGALG00000005543 ENSGALG00000005543 2 0.8 - - - - - - - 0.800 - -
31. GABARAPL3 GABARAPL3 32 0.8 - - - - - - - 0.800 - -
32. ATP7B ENSGALG00000017021 7 0.8 - - - - - - - 0.800 - - ATPase copper transporting beta [Source:HGNC Symbol;Acc:HGNC:870]
33. ENSGALG00000005511 ENSGALG00000005511 7 0.8 - - - - - - - 0.800 - -
34. BRSK2 ENSGALG00000006681 158 0.8 - - - - - - - 0.800 - - BR serine/threonine kinase 2 [Source:NCBI gene;Acc:423098]
35. SPP1 ENSGALG00000010926 8 0.8 - - - - - - - 0.800 - - secreted phosphoprotein 1 [Source:NCBI gene;Acc:395210]
36. NKD1 ENSGALG00000003767 76 0.8 - - - - - - - 0.800 - - naked cuticle homolog 1 [Source:HGNC Symbol;Acc:HGNC:17045]
37. UNC45A ENSGALG00000029714 158 0.8 - - - - - - - 0.800 - - unc-45 myosin chaperone A [Source:HGNC Symbol;Acc:HGNC:30594]
38. EIF4ENIF1 ENSGALG00000006898 24 0.8 - - - - - - - 0.800 - - eukaryotic translation initiation factor 4E nuclear import factor 1 [Source:HGNC Symbol;Acc:HGNC:16687]
39. CCDC152 CCDC152 28 0.8 - - - - - - - 0.800 - -
40. ENSGALG00000022857 ENSGALG00000022857 4 0.8 - - - - - - - 0.800 - -
41. SLC25A29 ENSGALG00000011220 17 0.8 - - - - - - - 0.800 - - solute carrier family 25 member 29 [Source:HGNC Symbol;Acc:HGNC:20116]
42. YAE1D1 23 0.8 - - - - - - - 0.800 - - Yae1 domain containing 1, transcript variant X2
43. TRIM2 ENSGALG00000009207 44 0.799 - - - - - - - 0.799 - - tripartite motif containing 2 [Source:NCBI gene;Acc:100857562]
44. SCN3B ENSGALG00000006490 48 0.799 - - - - - - - 0.799 - - sodium voltage-gated channel beta subunit 3 [Source:HGNC Symbol;Acc:HGNC:20665]
45. CEP57L1 ENSGALG00000015283 22 0.798 - - - - - - - 0.798 - - centrosomal protein 57 like 1 [Source:HGNC Symbol;Acc:HGNC:21561]
46. LRRC48 LRRC48 118 0.797 - - - - - - - 0.797 - -
47. ELOVL2 ENSGALG00000012748 97 0.794 - - - - - - - 0.794 - - ELOVL fatty acid elongase 2 [Source:NCBI gene;Acc:420858]
48. ENSGALG00000011516 ENSGALG00000011516 24 0.794 - - - - - - - 0.794 - -
49. SYNRG ENSGALG00000005468 27 0.792 - - - - - - - 0.792 - - synergin gamma [Source:HGNC Symbol;Acc:HGNC:557]
50. PIK3R2 ENSGALG00000003428 205 0.791 - - - - - - - 0.791 - - phosphoinositide-3-kinase regulatory subunit 2
51. CHTL1A CHTL1A 79 0.788 - - - - - 0.788 - - - -
52. LHX2 ENSGALG00000001124 18 0.787 - - - - - - - 0.787 - - LIM homeobox 2 [Source:NCBI gene;Acc:395705]
53. CXorf30 CXorf30 172 0.787 - - - - - - - 0.787 - -
54. LOC112532477 ENSGALG00000027520 40 0.785 - - - - - - - 0.785 - - fibrinogen-like protein 1-like protein
55. CASR ENSGALG00000038405 53 0.784 - - - - - - - 0.784 - - calcium sensing receptor [Source:HGNC Symbol;Acc:HGNC:1514]
56. CNOT4 ENSGALG00000011682 116 0.782 - - - - - - - 0.782 - - CCR4-NOT transcription complex subunit 4 [Source:NCBI gene;Acc:417936]
57. HPS3 ENSGALG00000040089 44 0.78 - - - - - - - 0.780 - - HPS3, biogenesis of lysosomal organelles complex 2 subunit 1 [Source:HGNC Symbol;Acc:HGNC:15597]
58. FAM122B ENSGALG00000006108 16 0.78 - - - - - - - 0.780 - - family with sequence similarity 122B [Source:HGNC Symbol;Acc:HGNC:30490]
59. TMEM159 ENSGALG00000027173 67 0.776 - - - - - - - 0.776 - - transmembrane protein 159 [Source:HGNC Symbol;Acc:HGNC:30136]
60. CBS ENSGALG00000016196 8 0.775 - - - - - - - 0.775 - - cystathionine-beta-synthase, transcript variant X3
61. CX3CL1 ENSGALG00000026663 218 0.774 - - - - - - - 0.774 - - C-X3-C motif chemokine ligand 1 [Source:NCBI gene;Acc:415651]
62. CDX2 ENSGALG00000034983 34 0.772 - - - - 0.772 - - - - - caudal type homeobox 2 [Source:NCBI gene;Acc:374205]
63. P2RX2 ENSGALG00000044649 1 0.77 - - - - - 0.770 - - - - purinergic receptor P2X 2 [Source:HGNC Symbol;Acc:HGNC:15459]
64. NIM1 NIM1 18 0.77 - - - - - 0.770 - - - -
65. PRKCZ ENSGALG00000001270 12 0.77 - - - - - 0.770 - - - - protein kinase C zeta [Source:HGNC Symbol;Acc:HGNC:9412]
66. DNAJC28 ENSGALG00000037414 6 0.77 - - - - - 0.770 - - - - DnaJ heat shock protein family (Hsp40) member C28 [Source:HGNC Symbol;Acc:HGNC:1297]
67. B3GALT6 ENSGALG00000001859 5 0.77 - - - - - 0.770 - - - - beta-1,3-galactosyltransferase 6
68. SYNPO2L ENSGALG00000005207 60 0.77 - - - - - 0.770 - - - - synaptopodin 2 like [Source:HGNC Symbol;Acc:HGNC:23532]
69. ENSGALG00000002522 ENSGALG00000002522 21 0.77 - - - - - 0.770 - - - -
70. SESN2_1 ENSGALG00000005648, ENSGALG00000037603 2 0.77 - - - - - 0.770 - - - - sestrin 2 [Source:HGNC Symbol;Acc:HGNC:20746]
71. ALOX5AP ENSGALG00000026781 28 0.77 - - - - - 0.770 - - - - arachidonate 5-lipoxygenase activating protein [Source:NCBI gene;Acc:770904]
72. BEST3 ENSGALG00000010029 11 0.77 - - - - - 0.770 - - - - bestrophin 3 [Source:NCBI gene;Acc:417849]
73. MILR1 ENSGALG00000046212 7 0.77 - - - - - 0.770 - - - - mast cell immunoglobulin-like receptor 1, transcript variant X3
74. TGFBR2 ENSGALG00000011442 3 0.77 - - - - - 0.770 - - - - transforming growth factor beta receptor 2 [Source:NCBI gene;Acc:396399]
75. C11orf87 ENSGALG00000017155 2 0.77 - - - - - 0.770 - - - - chromosome 11 open reading frame 87 [Source:HGNC Symbol;Acc:HGNC:33788]
76. C3orf33 ENSGALG00000026293 12 0.77 - - - - - 0.770 - - - - chromosome 3 open reading frame 33 [Source:HGNC Symbol;Acc:HGNC:26434]
77. SULT1B ENSGALG00000023122 7 0.77 - - - - - 0.770 - - - - sulfotransferase family, cytosolic, 1B [Source:NCBI gene;Acc:422661]
78. BCR ENSGALG00000006695 22 0.77 - - - - - 0.770 - - - - BCR, RhoGEF and GTPase activating protein [Source:HGNC Symbol;Acc:HGNC:1014]
79. ISOC1 ENSGALG00000000161 46 0.77 - - - - - 0.770 - - - - isochorismatase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24254]
80. SLC18A2 ENSGALG00000009289 11 0.77 - - - - - 0.770 - - - - solute carrier family 18 member A2 [Source:HGNC Symbol;Acc:HGNC:10935]
81. ABCD4 ENSGALG00000010229 3 0.77 - - - - - 0.770 - - - - ATP binding cassette subfamily D member 4 [Source:HGNC Symbol;Acc:HGNC:68]
82. RCAN2 ENSGALG00000016709 8 0.77 - - - - - 0.770 - - - - regulator of calcineurin 2 [Source:HGNC Symbol;Acc:HGNC:3041]
83. ADAM28 ENSGALG00000000357 57 0.77 - - - - - 0.770 - - - - ADAM metallopeptidase domain 28, transcript variant X2
84. CNST ENSGALG00000010649 18 0.77 - - - - - 0.770 - - - - consortin, connexin sorting protein [Source:HGNC Symbol;Acc:HGNC:26486]
85. SLC11A1 ENSGALG00000011434 0 0.77 - - - - - 0.770 - - - - solute carrier family 11 member 1 [Source:NCBI gene;Acc:395811]
86. SNORA54 SNORA54 2 0.77 - - - - - 0.770 - - - -
87. CCR7 ENSGALG00000035733 37 0.77 - - - - - 0.770 - - - - C-C motif chemokine receptor 7 [Source:NCBI gene;Acc:428315]
88. SGCZ ENSGALG00000013684 2 0.77 - - - - - 0.770 - - - - sarcoglycan zeta [Source:HGNC Symbol;Acc:HGNC:14075]
89. BACH2 ENSGALG00000015605 1 0.77 - - - - - 0.770 - - - - BTB domain and CNC homolog 2 [Source:HGNC Symbol;Acc:HGNC:14078]
90. NR3C1 ENSGALG00000032992 4 0.77 - - - - - 0.770 - - - - nuclear receptor subfamily 3 group C member 1 [Source:NCBI gene;Acc:416343]
91. LRRC7 ENSGALG00000011284 13 0.77 - - - - - 0.770 - - - - leucine rich repeat containing 7 [Source:HGNC Symbol;Acc:HGNC:18531]
92. TNFAIP2 ENSGALG00000011446 32 0.77 - - - - - 0.770 - - - - TNF alpha induced protein 2 [Source:HGNC Symbol;Acc:HGNC:11895]
93. GAL12 GAL12 2 0.77 - - - - - 0.770 - - - -
94. ALPI ENSGALG00000023866 19 0.77 - - - - - 0.770 - - - - alkaline phosphatase, intestinal, transcript variant X2
95. ABI1 ENSGALG00000007547 12 0.77 - - - - - 0.770 - - - - abl interactor 1 [Source:NCBI gene;Acc:420489]
96. TAGAP ENSGALG00000013747 34 0.77 - - - - - 0.770 - - - - T cell activation RhoGTPase activating protein [Source:HGNC Symbol;Acc:HGNC:15669]
97. CEND1 ENSGALG00000032320 0 0.77 - - - - - 0.770 - - - - cell cycle exit and neuronal differentiation 1 [Source:NCBI gene;Acc:770044]
98. USP12 ENSGALG00000034708 13 0.77 - - - - - 0.770 - - - - ubiquitin specific peptidase 12 [Source:HGNC Symbol;Acc:HGNC:20485]
99. DSC1 ENSGALG00000015140 16 0.77 - - - - - 0.770 - - - - desmocollin 1, transcript variant X1
100. K123 ENSGALG00000041978 16 0.77 - - - - - 0.770 - - - - K123 protein [Source:NCBI gene;Acc:395873]

There are 59 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA