Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CDKN3

Gene Name Gene ID Reads Annotation
CDKN3 ENSGALG00000012220 41 cyclin dependent kinase inhibitor 3 [Source:NCBI gene;Acc:423562]











Genes with expression patterns similar to CDKN3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CDKN3 ENSGALG00000012220 41 6 - - 1.000 1.000 1.000 1.000 - 1.000 - 1.000 cyclin dependent kinase inhibitor 3 [Source:NCBI gene;Acc:423562]
2. CD200R1A CD200R1A 105 1.56 - - - - - 0.730 - 0.830 - -
3. NRIP3 ENSGALG00000005903 58 0.949 - - - - - - - 0.949 - - nuclear receptor interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:1167]
4. ENSGALG00000027955 ENSGALG00000027955 102 0.93 - - - - - - - 0.930 - -
5. RTN4RL2 ENSGALG00000032903 809 0.921 - - - - - - - 0.921 - - reticulon 4 receptor like 2 [Source:HGNC Symbol;Acc:HGNC:23053]
6. TRAF-5 TRAF-5 102 0.899 - - - - - - - 0.899 - -
7. ABCA8 ENSGALG00000021399 11 0.896 - - - - - - - 0.896 - - ATP binding cassette subfamily A member 8
8. RAB22A ENSGALG00000007554 201 0.894 - - - - - - - 0.894 - - RAB22A, member RAS oncogene family [Source:NCBI gene;Acc:419318]
9. PAK2 ENSGALG00000006426 283 0.89 - - - - - - - 0.890 - - p21 (RAC1) activated kinase 2 [Source:HGNC Symbol;Acc:HGNC:8591]
10. SNAP23 ENSGALG00000009097 36 0.884 - - - - - - - 0.884 - - synaptosome associated protein 23 [Source:NCBI gene;Acc:423235]
11. PTPRD ENSGALG00000015058 37 0.88 - - - - - - - 0.880 - - protein tyrosine phosphatase, receptor type D [Source:HGNC Symbol;Acc:HGNC:9668]
12. MAPT ENSGALG00000000625 659 0.877 - - - - - - - 0.877 - - microtubule associated protein tau [Source:NCBI gene;Acc:426737]
13. ZIC3 ENSGALG00000031144 863 0.877 - - - - - - - 0.877 - - Zic family member 3 [Source:HGNC Symbol;Acc:HGNC:12874]
14. CCDC96 9 0.872 - - - - - - - 0.872 - - coiled-coil domain containing 96
15. APOAIV APOAIV 5 0.872 - - - - - - - 0.872 - -
16. GINS3 ENSGALG00000031209 32 0.872 - - - - - - - 0.872 - - GINS complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:25851]
17. SDR42E2 ENSGALG00000006964 57 0.872 - - - - - - - 0.872 - - short chain dehydrogenase/reductase family 42E, member 2 [Source:NCBI gene;Acc:416618]
18. ICOS ENSGALG00000008656 27 0.872 - - - - - - - 0.872 - - inducible T cell costimulator [Source:NCBI gene;Acc:424105]
19. STAB1 21 0.872 - - - - - - - 0.872 - - stabilin 1, transcript variant X2
20. ENSGALG00000019053 ENSGALG00000019053 8 0.872 - - - - - - - 0.872 - -
21. FOXP4 ENSGALG00000033497 13 0.872 - - - - - - - 0.872 - - forkhead box P4 [Source:HGNC Symbol;Acc:HGNC:20842]
22. USP53 ENSGALG00000011990 12 0.872 - - - - - - - 0.872 - - ubiquitin specific peptidase 53 [Source:HGNC Symbol;Acc:HGNC:29255]
23. PLB1 PLB1 101 0.872 - - - - - - - 0.872 - -
24. GFAP ENSGALG00000000909 21 0.871 - - - - - - - 0.871 - - glial fibrillary acidic protein [Source:HGNC Symbol;Acc:HGNC:4235]
25. TMCO4 ENSGALG00000004081 31 0.869 - - - - - - - 0.869 - - transmembrane and coiled-coil domains 4 [Source:HGNC Symbol;Acc:HGNC:27393]
26. KRT20 ENSGALG00000019716 11 0.868 - - - - - - - 0.868 - - keratin 20 [Source:NCBI gene;Acc:420045]
27. HDAC11 ENSGALG00000005092 176 0.868 - - - - - - - 0.868 - - histone deacetylase 11 [Source:NCBI gene;Acc:415978]
28. CD4 ENSGALG00000014477 19 0.867 - - - - - - - 0.867 - - CD4 molecule [Source:NCBI gene;Acc:395362]
29. INA ENSGALG00000028238 208 0.864 - - - - - - - 0.864 - - internexin neuronal intermediate filament protein alpha
30. ANKRD44 ENSGALG00000007996 17 0.863 - - - - - - - 0.863 - - ankyrin repeat domain 44 [Source:NCBI gene;Acc:424055]
31. DZANK1 ENSGALG00000008731 120 0.863 - - - - - - - 0.863 - - double zinc ribbon and ankyrin repeat domains 1 [Source:NCBI gene;Acc:416722]
32. DNAI2 ENSGALG00000004495 45 0.862 - - - - - - - 0.862 - - dynein axonemal intermediate chain 2
33. OSBPL2 ENSGALG00000005195 94 0.86 - - - - - - - 0.860 - - oxysterol binding protein like 2 [Source:NCBI gene;Acc:419227]
34. STXBP1 ENSGALG00000040003 157 0.859 - - - - - - - 0.859 - - syntaxin binding protein 1 [Source:NCBI gene;Acc:404293]
35. KLRD1 ENSGALG00000014722 27 0.859 - - - - - - - 0.859 - - killer cell lectin like receptor D1 [Source:NCBI gene;Acc:769174]
36. RIPK4 ENSGALG00000040189 102 0.856 - - - - - - - 0.856 - - receptor interacting serine/threonine kinase 4 [Source:HGNC Symbol;Acc:HGNC:496]
37. AQP12 AQP12 11 0.855 - - - - - - - 0.855 - -
38. ZBTB41 ENSGALG00000002305 97 0.853 - - - - - - - 0.853 - - zinc finger and BTB domain containing 41, transcript variant X2
39. HAVCR1 ENSGALG00000017362 25 0.851 - - - - - - - 0.851 - - hepatitis A virus cellular receptor 1 [Source:NCBI gene;Acc:416249]
40. ABCC4 ENSGALG00000016896 154 0.851 - - - - - - - 0.851 - - ATP binding cassette subfamily C member 4 [Source:NCBI gene;Acc:418791]
41. NXPH2 ENSGALG00000029083 353 0.848 - - - - - - - 0.848 - - neurexophilin 2 [Source:HGNC Symbol;Acc:HGNC:8076]
42. KIAA0513 ENSGALG00000025938 46 0.847 - - - - - - - 0.847 - - KIAA0513 [Source:HGNC Symbol;Acc:HGNC:29058]
43. IRG1 IRG1 21 0.844 - - - - - - - 0.844 - -
44. INPP4A ENSGALG00000029709 48 0.841 - - - - - - - 0.841 - - inositol polyphosphate-4-phosphatase type I A [Source:HGNC Symbol;Acc:HGNC:6074]
45. HTT ENSGALG00000015635 226 0.841 - - - - - - - 0.841 - - huntingtin [Source:HGNC Symbol;Acc:HGNC:4851]
46. EPB41L4A ENSGALG00000000234 113 0.839 - - - - - - - 0.839 - - erythrocyte membrane protein band 4.1 like 4A [Source:HGNC Symbol;Acc:HGNC:13278]
47. ENPP3 ENSGALG00000037587 25 0.839 - - - - - - - 0.839 - - ectonucleotide pyrophosphatase/phosphodiesterase 3 [Source:HGNC Symbol;Acc:HGNC:3358]
48. PRSS35 ENSGALG00000015847 52 0.838 - - - - - - - 0.838 - - serine protease 35 [Source:HGNC Symbol;Acc:HGNC:21387]
49. VWCE ENSGALG00000043089 212 0.836 - - - - - - - 0.836 - - von Willebrand factor C and EGF domains [Source:HGNC Symbol;Acc:HGNC:26487]
50. LOC417973 ENSGALG00000019325 9 0.835 - - - - - - - 0.835 - - uncharacterized LOC417973, transcript variant X1
51. ENSGALG00000019522 ENSGALG00000019522 122 0.826 - - - - - - - 0.826 - -
52. ENSGALG00000023731 ENSGALG00000023731 149 0.825 - - - - - - - 0.825 - -
53. C14H16ORF42 C14H16ORF42 263 0.823 - - - - - - - 0.823 - -
54. SLC7A2 ENSGALG00000013627 58 0.822 - - - - - - - 0.822 - - solute carrier family 7 member 2 [Source:NCBI gene;Acc:422730]
55. MMEL1 ENSGALG00000001115 46 0.819 - - - - - - - 0.819 - - membrane metalloendopeptidase like 1 [Source:HGNC Symbol;Acc:HGNC:14668]
56. SUZ12 ENSGALG00000003277 177 0.818 - - - - - - - 0.818 - - SUZ12, polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:17101]
57. ABCB7 ENSGALG00000007788 170 0.817 - - - - - - - 0.817 - - ATP binding cassette subfamily B member 7 [Source:HGNC Symbol;Acc:HGNC:48]
58. CHIC2 ENSGALG00000013931 21 0.817 - - - - - 0.817 - - - - cysteine rich hydrophobic domain 2 [Source:HGNC Symbol;Acc:HGNC:1935]
59. SMYD1 ENSGALG00000015935 75 0.815 - - - - - - - 0.815 - - SET and MYND domain containing 1 [Source:NCBI gene;Acc:373960]
60. ENSGALG00000021882 ENSGALG00000021882 63 0.815 - - - - - - - 0.815 - -
61. RNASET2 ENSGALG00000011426 40 0.812 - - - - - - - 0.812 - - ribonuclease T2 [Source:NCBI gene;Acc:421569]
62. FAM19A3 75 0.812 - - - - - - - 0.812 - - family with sequence similarity 19 member A3, C-C motif chemokine like, transcript variant X2
63. C1QTNF6 ENSGALG00000027067 493 0.808 - - - - - - - 0.808 - - C1q and TNF related 6 [Source:HGNC Symbol;Acc:HGNC:14343]
64. ARHGAP25 ENSGALG00000035194 74 0.804 - - - - - - - 0.804 - - Rho GTPase activating protein 25 [Source:NCBI gene;Acc:419516]
65. FKBP14 ENSGALG00000011181 154 0.798 - - - - - - - 0.798 - - FK506 binding protein 14 [Source:HGNC Symbol;Acc:HGNC:18625]
66. TP53I3 ENSGALG00000016502 178 0.797 - - - - - - - 0.797 - - tumor protein p53 inducible protein 3 [Source:HGNC Symbol;Acc:HGNC:19373]
67. MSS51 ENSGALG00000002597 22 0.797 - - - - - - - 0.797 - - MSS51 mitochondrial translational activator [Source:HGNC Symbol;Acc:HGNC:21000]
68. ADCYAP1R1 ENSGALG00000005223 114 0.797 - - - - - - - 0.797 - - ADCYAP receptor type I [Source:NCBI gene;Acc:420386]
69. CCDC86 ENSGALG00000036935 5280 0.793 - - - - - - - 0.793 - - coiled-coil domain containing 86 [Source:HGNC Symbol;Acc:HGNC:28359]
70. FAM219A ENSGALG00000005821 52 0.793 - - - - - - - 0.793 - - family with sequence similarity 219 member A [Source:HGNC Symbol;Acc:HGNC:19920]
71. ZNFX1 ENSGALG00000004859 33 0.793 - - - - - - - 0.793 - - zinc finger NFX1-type containing 1 [Source:HGNC Symbol;Acc:HGNC:29271]
72. ARHGEF37 ENSGALG00000039652 28 0.789 - - - - - - - 0.789 - - Rho guanine nucleotide exchange factor 37 [Source:HGNC Symbol;Acc:HGNC:34430]
73. SPINK4 ENSGALG00000043964 50 0.788 - - - - - - - 0.788 - - serine peptidase inhibitor, Kazal type 4 [Source:HGNC Symbol;Acc:HGNC:16646]
74. GPR61 ENSGALG00000040168 70 0.785 - - - - - - - 0.785 - - G protein-coupled receptor 61 [Source:HGNC Symbol;Acc:HGNC:13300]
75. PLA2G10L ENSGALG00000019233 11 0.784 - - - - - 0.784 - - - - phospholipase A2 group X-like, transcript variant X2
76. CNTN1 ENSGALG00000009523 158 0.783 - - - - - - - 0.783 - - contactin 1 [Source:NCBI gene;Acc:417786]
77. GFRA1 ENSGALG00000009173 371 0.779 - - - - - - - 0.779 - - GDNF family receptor alpha 1 [Source:NCBI gene;Acc:395994]
78. CX3CR1 ENSGALG00000038000 48 0.775 - - - - - - - 0.775 - - C-X3-C motif chemokine receptor 1 [Source:HGNC Symbol;Acc:HGNC:2558]
79. LCA5L ENSGALG00000016125 99 0.774 - - - - - - - 0.774 - - LCA5L, lebercilin like [Source:HGNC Symbol;Acc:HGNC:1255]
80. KDM5A ENSGALG00000012986 624 0.771 - - - - - - - 0.771 - - lysine demethylase 5A [Source:HGNC Symbol;Acc:HGNC:9886]
81. LMOD1 ENSGALG00000028721 81 0.771 - - - - - - - 0.771 - - leiomodin 1 [Source:HGNC Symbol;Acc:HGNC:6647]
82. SGMS1 ENSGALG00000003701 2459 0.771 - - - - - - - 0.771 - - sphingomyelin synthase 1 [Source:NCBI gene;Acc:378907]
83. DSC1 ENSGALG00000015140 16 0.769 - - - - - - - 0.769 - - desmocollin 1, transcript variant X1
84. ENSGALG00000026925 ENSGALG00000026925 119 0.767 - - - - - 0.767 - - - -
85. FURIN ENSGALG00000008341 2609 0.766 - - - - - - - 0.766 - - furin, paired basic amino acid cleaving enzyme [Source:NCBI gene;Acc:395457]
86. ENSGALG00000019430 ENSGALG00000019430 32 0.765 - - - - - - - 0.765 - -
87. LRRCC1 ENSGALG00000039499 480 0.763 - - - - - - - 0.763 - - leucine rich repeat and coiled-coil centrosomal protein 1 [Source:HGNC Symbol;Acc:HGNC:29373]
88. PARP12 ENSGALG00000046187 10 0.761 - - - - - - - - - 0.761 poly(ADP-ribose) polymerase family member 12 [Source:HGNC Symbol;Acc:HGNC:21919]
89. U12 U12 3 0.761 - - - - - - - - - 0.761
90. ACAP3 ENSGALG00000033293 605 0.76 - - - - - - - 0.760 - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 3, transcript variant X6
91. ENSGALG00000028258 ENSGALG00000028258 67 0.751 - - - - - 0.751 - - - -
92. ARRDC1 ENSGALG00000008475 80 0.75 - - - - - - - 0.750 - - arrestin domain containing 1 [Source:NCBI gene;Acc:427772]
93. SKIDA1 ENSGALG00000017395 103 0.746 - - - - - - - 0.746 - - SKI/DACH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:32697]
94. PCDH7 ENSGALG00000033883 6 0.742 - - - - - 0.742 - - - - protocadherin 7 [Source:HGNC Symbol;Acc:HGNC:8659]
95. COBL ENSGALG00000013102 84 0.741 - - - - - - - 0.741 - - cordon-bleu WH2 repeat protein [Source:HGNC Symbol;Acc:HGNC:22199]
96. RND2 ENSGALG00000002804 9 0.739 - - - - 0.739 - - - - - Rho family GTPase 2 [Source:NCBI gene;Acc:428307]
97. DCLK1 ENSGALG00000041263 40 0.738 - - - - - - - 0.738 - - doublecortin like kinase 1 [Source:NCBI gene;Acc:418903]
98. OPTC ENSGALG00000003554 3698 0.737 - - - - - - - 0.737 - - opticin [Source:NCBI gene;Acc:395130]
99. PER3 ENSGALG00000000573 590 0.737 - - - - - - - 0.737 - - period circadian clock 3 [Source:NCBI gene;Acc:419366]
100. SH2D4B ENSGALG00000002370 10 0.736 - - - - - - - - - 0.736 SH2 domain containing 4B [Source:HGNC Symbol;Acc:HGNC:31440]

There are 48 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA