Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CDKN1B

Gene Name Gene ID Reads Annotation
CDKN1B ENSGALG00000022980 4606 cyclin dependent kinase inhibitor 1B [Source:NCBI gene;Acc:374106]











Genes with expression patterns similar to CDKN1B

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CDKN1B ENSGALG00000022980 4606 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cyclin dependent kinase inhibitor 1B [Source:NCBI gene;Acc:374106]
2. SPEN ENSGALG00000036932 9688 1.731 - - - - 0.962 - 0.769 - - - spen family transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:17575]
3. LOC426385 ENSGALG00000026301 2703 1.718 - - - - 0.981 - 0.737 - - - serine/threonine kinase 35-like, transcript variant X2
4. NEK6 ENSGALG00000001118 20333 1.69 - - - - 0.972 - 0.718 - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
5. CEP78 ENSGALG00000015179 5227 1.685 - - - - 0.924 - 0.761 - - - centrosomal protein 78 [Source:HGNC Symbol;Acc:HGNC:25740]
6. TAF3 ENSGALG00000006731 15569 1.668 - - - - 0.966 - 0.702 - - - TATA-box binding protein associated factor 3 [Source:NCBI gene;Acc:419107]
7. TM4SF18 4553 1.5 - - - - - - 0.766 0.734 - - transmembrane 4 L six family member 18, transcript variant X2
8. RAMP3 ENSGALG00000037246 1187 0.989 - - - - 0.989 - - - - - receptor activity modifying protein 3 [Source:NCBI gene;Acc:420786]
9. BRF1 ENSGALG00000011705 3406 0.989 - - - - 0.989 - - - - - BRF1, RNA polymerase III transcription initiation factor subunit [Source:HGNC Symbol;Acc:HGNC:11551]
10. SMG7 ENSGALG00000004667 707 0.989 - - - - 0.989 - - - - - SMG7, nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:16792]
11. MED8 ENSGALG00000009993 3095 0.989 - - - - 0.989 - - - - - mediator complex subunit 8 [Source:NCBI gene;Acc:424565]
12. RBM6 ENSGALG00000035578 1690 0.989 - - - - 0.989 - - - - - RNA binding motif protein 6 [Source:NCBI gene;Acc:415931]
13. ANKRD9 ENSGALG00000011376 525 0.989 - - - - 0.989 - - - - - ankyrin repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20096]
14. PRDM4 ENSGALG00000012619 876 0.988 - - - - 0.988 - - - - - PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
15. LZIC ENSGALG00000002616 9052 0.988 - - - - 0.988 - - - - - leucine zipper and CTNNBIP1 domain containing [Source:NCBI gene;Acc:419445]
16. SDCBP ENSGALG00000015436 1228 0.988 - - - - 0.988 - - - - - syndecan binding protein [Source:NCBI gene;Acc:421136]
17. SYNE1 ENSGALG00000013505 2324 0.988 - - - - 0.988 - - - - - spectrin repeat containing, nuclear envelope 1, transcript variant X3
18. PREP2 PREP2 238 0.988 - - - - 0.988 - - - - -
19. GTF2H1 ENSGALG00000042340 1553 0.988 - - - - 0.988 - - - - - general transcription factor IIH subunit 1 [Source:NCBI gene;Acc:423081]
20. BAHD1 ENSGALG00000033675 1779 0.988 - - - - 0.988 - - - - - bromo adjacent homology domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29153]
21. ASAP2 ENSGALG00000016419 1393 0.988 - - - - 0.988 - - - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
22. HSF2 ENSGALG00000038420 5259 0.987 - - - - 0.987 - - - - - heat shock transcription factor 2 [Source:NCBI gene;Acc:421724]
23. TMF1 ENSGALG00000013408 3344 0.987 - - - - 0.987 - - - - - TATA element modulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:11870]
24. SNX14 ENSGALG00000015831 2554 0.987 - - - - 0.987 - - - - - sorting nexin 14 [Source:NCBI gene;Acc:421832]
25. NDUFV1 ENSGALG00000042809 6222 0.987 - - - - 0.987 - - - - - NADH:ubiquinone oxidoreductase core subunit V1 [Source:NCBI gene;Acc:430210]
26. COQ5 ENSGALG00000007185 5614 0.986 - - - - 0.986 - - - - - coenzyme Q5, methyltransferase [Source:NCBI gene;Acc:416975]
27. RBM34 ENSGALG00000029915 5618 0.986 - - - - 0.986 - - - - - RNA binding motif protein 34 [Source:HGNC Symbol;Acc:HGNC:28965]
28. YARS ENSGALG00000003563 11093 0.986 - - - - 0.986 - - - - - tyrosyl-tRNA synthetase [Source:NCBI gene;Acc:419666]
29. C9orf85 ENSGALG00000026001 4110 0.986 - - - - 0.986 - - - - - chromosome 9 open reading frame 85 [Source:HGNC Symbol;Acc:HGNC:28784]
30. SAP30 ENSGALG00000036252 2032 0.986 - - - - 0.986 - - - - - Sin3A associated protein 30 [Source:HGNC Symbol;Acc:HGNC:10532]
31. PITHD1 ENSGALG00000003986 11470 0.986 - - - - 0.986 - - - - - PITH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25022]
32. PTK2B ENSGALG00000016564 406 0.986 - - - - 0.986 - - - - - protein tyrosine kinase 2 beta [Source:HGNC Symbol;Acc:HGNC:9612]
33. PHTF1 ENSGALG00000001845 3276 0.986 - - - - 0.986 - - - - - putative homeodomain transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:8939]
34. FNDC5 ENSGALG00000003567 3328 0.985 - - - - 0.985 - - - - - Gallus gallus fibronectin type III domain containing 5 (FNDC5), mRNA. [Source:RefSeq mRNA;Acc:NM_001318986]
35. ENSGALG00000006569 ENSGALG00000006569 2169 0.985 - - - - 0.985 - - - - -
36. MRPL16 ENSGALG00000029419 8033 0.985 - - - - 0.985 - - - - - mitochondrial ribosomal protein L16 [Source:HGNC Symbol;Acc:HGNC:14476]
37. DLL1 ENSGALG00000011182 1613 0.984 - - - - 0.984 - - - - - delta like canonical Notch ligand 1 [Source:NCBI gene;Acc:395820]
38. RAD54B ENSGALG00000043597 1699 0.984 - - - - 0.984 - - - - - RAD54 homolog B [Source:NCBI gene;Acc:395449]
39. MED21 ENSGALG00000027435 5766 0.984 - - - - 0.984 - - - - - mediator complex subunit 21 [Source:HGNC Symbol;Acc:HGNC:11473]
40. ETS1 ENSGALG00000001143 7284 0.984 - - - - 0.984 - - - - - v-ets avian erythroblastosis virus E26 oncogene homolog 1 [Source:NCBI gene;Acc:396235]
41. EDNRA ENSGALG00000010013 2472 0.983 - - - - 0.983 - - - - - endothelin receptor type A [Source:NCBI gene;Acc:373908]
42. KIF11 ENSGALG00000030597 5528 0.982 - - - - 0.982 - - - - - kinesin family member 11 [Source:NCBI gene;Acc:423809]
43. STARD3NL ENSGALG00000033038 4851 0.982 - - - - 0.982 - - - - - STARD3 N-terminal like [Source:HGNC Symbol;Acc:HGNC:19169]
44. TIMMDC1 ENSGALG00000024480 9337 0.982 - - - - 0.982 - - - - - translocase of inner mitochondrial membrane domain containing 1 [Source:NCBI gene;Acc:418453]
45. WDR92 ENSGALG00000008760 3934 0.982 - - - - 0.982 - - - - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
46. DGKZ ENSGALG00000008380 5389 0.982 - - - - 0.982 - - - - - diacylglycerol kinase zeta [Source:NCBI gene;Acc:423197]
47. ENSGALG00000027854 ENSGALG00000027854 5007 0.982 - - - - 0.982 - - - - -
48. IARS2 ENSGALG00000009566 4599 0.981 - - - - 0.981 - - - - - isoleucyl-tRNA synthetase 2, mitochondrial [Source:NCBI gene;Acc:421346]
49. LMAN2 ENSGALG00000033232 11740 0.981 - - - - 0.981 - - - - - lectin, mannose binding 2 [Source:HGNC Symbol;Acc:HGNC:16986]
50. PSMG3 ENSGALG00000004203 11240 0.98 - - - - 0.980 - - - - - proteasome assembly chaperone 3 [Source:NCBI gene;Acc:416463]
51. FUNDC2 ENSGALG00000029585 9334 0.98 - - - - 0.980 - - - - - FUN14 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24925]
52. RALGDS ENSGALG00000003412 4478 0.979 - - - - 0.979 - - - - - ral guanine nucleotide dissociation stimulator, transcript variant X10
53. PBRM1 ENSGALG00000037455 6450 0.978 - - - - 0.978 - - - - - polybromo 1 [Source:NCBI gene;Acc:396074]
54. PSMD3 ENSGALG00000033162 25615 0.978 - - - - 0.978 - - - - - proteasome 26S subunit, non-ATPase 3 [Source:NCBI gene;Acc:426133]
55. SFXN5 ENSGALG00000016094 2678 0.977 - - - - 0.977 - - - - - sideroflexin 5 [Source:HGNC Symbol;Acc:HGNC:16073]
56. HARS ENSGALG00000035080 11602 0.976 - - - - 0.976 - - - - - histidyl-tRNA synthetase [Source:NCBI gene;Acc:416132]
57. SH3BGR ENSGALG00000016127 2561 0.976 - - - - 0.976 - - - - - SH3 domain binding glutamate rich protein
58. CDCA7 ENSGALG00000040833 7484 0.975 - - - - 0.975 - - - - - cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]
59. CCDC132 CCDC132 2632 0.975 - - - - 0.975 - - - - -
60. LGMN ENSGALG00000010811 7401 0.975 - - - - 0.975 - - - - - legumain [Source:HGNC Symbol;Acc:HGNC:9472]
61. TSPO2 ENSGALG00000003212 5141 0.974 - - - - 0.974 - - - - - translocator protein 2 [Source:HGNC Symbol;Acc:HGNC:21256]
62. UPF3B ENSGALG00000008618 12350 0.974 - - - - 0.974 - - - - - UPF3B, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:20439]
63. MEF2BNB MEF2BNB 5578 0.974 - - - - 0.974 - - - - -
64. MARC1 ENSGALG00000009453 5675 0.974 - - - - 0.974 - - - - - mitochondrial amidoxime reducing component 1 [Source:NCBI gene;Acc:428563]
65. MYBL2 ENSGALG00000003503 15875 0.973 - - - - 0.973 - - - - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
66. RHOT1 ENSGALG00000003397 5149 0.973 - - - - 0.973 - - - - - ras homolog family member T1 [Source:NCBI gene;Acc:417410]
67. DLD ENSGALG00000007931 11011 0.972 - - - - 0.972 - - - - - dihydrolipoamide dehydrogenase [Source:NCBI gene;Acc:417699]
68. UTP6 ENSGALG00000003260 4909 0.972 - - - - 0.972 - - - - - UTP6, small subunit processome component [Source:NCBI gene;Acc:417405]
69. WNK2 ENSGALG00000038850 4712 0.97 - - - - 0.970 - - - - - WNK lysine deficient protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:14542]
70. MYO9A ENSGALG00000033618 4505 0.969 - - - - 0.969 - - - - - myosin IXA, transcript variant X10
71. CDH3 5050 0.969 - - - - 0.969 - - - - - cadherin 3
72. ACAT2 ENSGALG00000011659 12825 0.968 - - - - 0.968 - - - - - acetyl-CoA acetyltransferase 2 [Source:NCBI gene;Acc:421587]
73. PRCC ENSGALG00000040696 9346 0.967 - - - - 0.967 - - - - - proline rich mitotic checkpoint control factor [Source:HGNC Symbol;Acc:HGNC:9343]
74. ZC3H6 ENSGALG00000008269 10353 0.967 - - - - 0.967 - - - - - zinc finger CCCH-type containing 6 [Source:NCBI gene;Acc:421230]
75. GATC ENSGALG00000007195 8610 0.966 - - - - 0.966 - - - - - glutamyl-tRNA amidotransferase subunit C, transcript variant X2
76. LGALS1 ENSGALG00000012420 13993 0.965 - - - - 0.965 - - - - - galectin 1 [Source:NCBI gene;Acc:396491]
77. DENR ENSGALG00000003795 30805 0.964 - - - - 0.964 - - - - - density regulated re-initiation and release factor [Source:NCBI gene;Acc:771794]
78. NUP88 ENSGALG00000032280 9847 0.963 - - - - 0.963 - - - - - nucleoporin 88 [Source:HGNC Symbol;Acc:HGNC:8067]
79. Mar-05 Mar-05 6330 0.96 - - - - 0.960 - - - - -
80. SRGAP1 ENSGALG00000009825 6753 0.959 - - - - 0.959 - - - - - SLIT-ROBO Rho GTPase activating protein 1 [Source:NCBI gene;Acc:417821]
81. SRP19 ENSGALG00000000218 14207 0.958 - - - - 0.958 - - - - - signal recognition particle 19 [Source:HGNC Symbol;Acc:HGNC:11300]
82. SPRED1 ENSGALG00000028203 6520 0.958 - - - - 0.958 - - - - - sprouty related EVH1 domain containing 1 [Source:NCBI gene;Acc:423292]
83. SLMO2 SLMO2 9207 0.958 - - - - 0.958 - - - - -
84. TM9SF3 ENSGALG00000005534 15290 0.956 - - - - 0.956 - - - - - transmembrane 9 superfamily member 3
85. SLC30A4 ENSGALG00000005703 5696 0.955 - - - - 0.955 - - - - - solute carrier family 30 member 4 [Source:NCBI gene;Acc:415444]
86. BHMT ENSGALG00000004518 4700 0.955 - - - - 0.955 - - - - - betaine--homocysteine S-methyltransferase
87. ZYX ENSGALG00000014688 8686 0.951 - - - - 0.951 - - - - - zyxin [Source:NCBI gene;Acc:418300]
88. PRKCI ENSGALG00000009364 11574 0.951 - - - - 0.951 - - - - - protein kinase C iota [Source:NCBI gene;Acc:424991]
89. HDAC8 ENSGALG00000004825 12066 0.951 - - - - 0.951 - - - - - histone deacetylase 8, transcript variant X2
90. CENPP ENSGALG00000004687 6707 0.948 - - - - 0.948 - - - - - centromere protein P [Source:NCBI gene;Acc:415952]
91. VMA21 ENSGALG00000009065 6432 0.946 - - - - 0.946 - - - - - VMA21, vacuolar ATPase assembly factor [Source:NCBI gene;Acc:422385]
92. RPL22 ENSGALG00000000719 74238 0.945 - - - - 0.945 - - - - - ribosomal protein L22 [Source:NCBI gene;Acc:373937]
93. COMMD2 ENSGALG00000028001 18981 0.945 - - - - 0.945 - - - - - COMM domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24993]
94. NARS ENSGALG00000040506 9506 0.944 - - - - 0.944 - - - - - asparaginyl-tRNA synthetase [Source:NCBI gene;Acc:426856]
95. RAD23B ENSGALG00000015540 10828 0.944 - - - - 0.944 - - - - - RAD23 homolog B, nucleotide excision repair protein [Source:HGNC Symbol;Acc:HGNC:9813]
96. UBE2D3 ENSGALG00000012311 39831 0.943 - - - - 0.943 - - - - - ubiquitin conjugating enzyme E2 D3 [Source:NCBI gene;Acc:422713]
97. NDUFS4 ENSGALG00000028026 25876 0.942 - - - - 0.942 - - - - - NADH:ubiquinone oxidoreductase subunit S4 [Source:HGNC Symbol;Acc:HGNC:7711]
98. SEPHS1 ENSGALG00000014575 10701 0.941 - - - - 0.941 - - - - - selenophosphate synthetase 1 [Source:NCBI gene;Acc:426612]
99. PSMC1 ENSGALG00000010675 20633 0.94 - - - - 0.940 - - - - - proteasome 26S subunit, ATPase 1 [Source:NCBI gene;Acc:395804]
100. DNAJC9 ENSGALG00000002701 19249 0.939 - - - - 0.939 - - - - - DnaJ heat shock protein family (Hsp40) member C9 [Source:NCBI gene;Acc:423640]

There are 157 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA