Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CDKL5

Gene Name Gene ID Reads Annotation
CDKL5 ENSGALG00000016529 26 cyclin dependent kinase like 5 [Source:HGNC Symbol;Acc:HGNC:11411]











Genes with expression patterns similar to CDKL5

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CDKL5 ENSGALG00000016529 26 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 cyclin dependent kinase like 5 [Source:HGNC Symbol;Acc:HGNC:11411]
2. IL2RG ENSGALG00000005638 21 2.276 - - - - - 0.823 0.750 0.703 - - interleukin 2 receptor subunit gamma [Source:NCBI gene;Acc:395199]
3. SMAD9 ENSGALG00000017050 11 1.823 - - - - - 0.823 1.000 - - - SMAD family member 9 [Source:NCBI gene;Acc:395543]
4. RAB11FIP1 41 1.801 - - - - - - 1.000 - - 0.801 RAB11 family interacting protein 1, transcript variant X2
5. KLHL30 ENSGALG00000006260 32 1.755 - - - - - - 1.000 - - 0.755 kelch like family member 30 [Source:HGNC Symbol;Acc:HGNC:24770]
6. CEP250 ENSGALG00000026151 163 1.717 - - - - - - - 0.911 - 0.806 centrosomal protein 250 [Source:HGNC Symbol;Acc:HGNC:1859]
7. gga-mir-6659 ENSGALG00000028216 6 1.598 - - - - 0.783 0.815 - - - - gga-mir-6659 [Source:miRBase;Acc:MI0022479]
8. ENSGALG00000025765 ENSGALG00000025765 1 1 - - - - - - 1.000 - - -
9. BTBD6 ENSGALG00000033813 163 1 - - - - - - 1.000 - - - BTB domain containing 6 [Source:HGNC Symbol;Acc:HGNC:19897]
10. OCSTAMP ENSGALG00000044719 10 1 - - - - - - 1.000 - - - osteoclast stimulatory transmembrane protein [Source:HGNC Symbol;Acc:HGNC:16116]
11. LVRN ENSGALG00000002318 14 1 - - - - - - 1.000 - - - laeverin [Source:HGNC Symbol;Acc:HGNC:26904]
12. APOPT1 ENSGALG00000044519 193 1 - - - - - - 1.000 - - - apoptogenic 1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:20492]
13. TNFRSF6B ENSGALG00000006106 12 1 - - - - - - 1.000 - - - TNF receptor superfamily member 6b [Source:HGNC Symbol;Acc:HGNC:11921]
14. CRLF1 ENSGALG00000026146 1 1 - - - - - - 1.000 - - - cytokine receptor like factor 1 [Source:HGNC Symbol;Acc:HGNC:2364]
15. MCOLN3 ENSGALG00000008709 21 1 - - - - - - 1.000 - - - mucolipin 3 [Source:HGNC Symbol;Acc:HGNC:13358]
16. NR4A3 ENSGALG00000013568 1 1 - - - - - - 1.000 - - - nuclear receptor subfamily 4 group A member 3 [Source:HGNC Symbol;Acc:HGNC:7982]
17. MED12 ENSGALG00000036322 814 1 - - - - - - 1.000 - - - mediator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:11957]
18. CACNA1C ENSGALG00000013022 322 1 - - - - - - 1.000 - - - calcium voltage-gated channel subunit alpha1 C [Source:HGNC Symbol;Acc:HGNC:1390]
19. RAB37 ENSGALG00000027789 17 1 - - - - - - 1.000 - - - RAB37, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:30268]
20. SLCO1B1 ENSGALG00000019276 7 1 - - - - - - 1.000 - - - solute carrier organic anion transporter family member 1B1, transcript variant X1
21. NTN1 ENSGALG00000023626 12 1 - - - - - - 1.000 - - - netrin 1 [Source:NCBI gene;Acc:396389]
22. SS2 ENSGALG00000003034 277 1 - - - - - - 1.000 - - - somatostatin II [Source:NCBI gene;Acc:395106]
23. FYCO1 ENSGALG00000040212 75 1 - - - - - - 1.000 - - - FYVE and coiled-coil domain containing 1 [Source:NCBI gene;Acc:428453]
24. TBC1D20 ENSGALG00000006201 6 1 - - - - - - 1.000 - - - TBC1 domain family member 20 [Source:HGNC Symbol;Acc:HGNC:16133]
25. LRCH3 ENSGALG00000007595 21 1 - - - - - - 1.000 - - - leucine rich repeats and calponin homology domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28637]
26. ENSGALG00000028416 ENSGALG00000028416 11 1 - - - - - - 1.000 - - -
27. C1S ENSGALG00000014603 80 1 - - - - - - 1.000 - - - complement C1s [Source:NCBI gene;Acc:418294]
28. ENSGALG00000011799 ENSGALG00000011799 37 1 - - - - - - 1.000 - - -
29. FBXO43 ENSGALG00000038940 7 1 - - - - - - 1.000 - - - F-box protein 43 [Source:HGNC Symbol;Acc:HGNC:28521]
30. DPYS ENSGALG00000039011 54 1 - - - - - - 1.000 - - - dihydropyrimidinase [Source:NCBI gene;Acc:420266]
31. JMY ENSGALG00000014819 46 1 - - - - - 1.000 - - - - junction mediating and regulatory protein, p53 cofactor [Source:HGNC Symbol;Acc:HGNC:28916]
32. AOX1 ENSGALG00000008185 14 1 - - - - - - 1.000 - - - aldehyde oxidase 1 [Source:NCBI gene;Acc:424071]
33. RBM15 ENSGALG00000000401 22 1 - - - - - - 1.000 - - - RNA binding motif protein 15 [Source:HGNC Symbol;Acc:HGNC:14959]
34. MYO19 9 1 - - - - - - 1.000 - - - myosin XIX, transcript variant X5
35. SLC12A5 ENSGALG00000042199 1 1 - - - - - - 1.000 - - - solute carrier family 12 member 5 [Source:HGNC Symbol;Acc:HGNC:13818]
36. ZNF469 ENSGALG00000026534 8 1 - - - - - - 1.000 - - - zinc finger protein 469, transcript variant X3
37. SNORD103 SNORD103 25 1 - - - - - - 1.000 - - -
38. SLC6A6 ENSGALG00000006425 31 1 - - - - - - 1.000 - - - solute carrier family 6 member 6 [Source:NCBI gene;Acc:416041]
39. PIRT 41 1 - - - - - - 1.000 - - - phosphoinositide-interacting regulator of transient receptor potential channels
40. CAPN9 158 1 - - - - - - 1.000 - - - calpain 9
41. LRRC58 ENSGALG00000033186 15 1 - - - - - - 1.000 - - - leucine rich repeat containing 58 [Source:HGNC Symbol;Acc:HGNC:26968]
42. DMGDH ENSGALG00000004491 15 1 - - - - - - 1.000 - - - dimethylglycine dehydrogenase [Source:HGNC Symbol;Acc:HGNC:24475]
43. CLRN1 ENSGALG00000010384 7 1 - - - - - - 1.000 - - - clarin 1 [Source:HGNC Symbol;Acc:HGNC:12605]
44. CFI ENSGALG00000012126 20 1 - - - - - - 1.000 - - - complement factor I [Source:NCBI gene;Acc:428773]
45. IRF-4 IRF-4 19 1 - - - - - - 1.000 - - -
46. CA13 ENSGALG00000033428 1 1 - - - - - - 1.000 - - - carbonic anhydrase 13 [Source:HGNC Symbol;Acc:HGNC:14914]
47. ZDHHC16 ENSGALG00000007592 19 1 - - - - - - 1.000 - - - zinc finger DHHC-type containing 16 [Source:HGNC Symbol;Acc:HGNC:20714]
48. TRDN ENSGALG00000014848 130 0.963 - - - - - 0.963 - - - - triadin
49. HS3ST5 ENSGALG00000026594 44 0.949 - - - - - - - 0.949 - - heparan sulfate-glucosamine 3-sulfotransferase 5 [Source:HGNC Symbol;Acc:HGNC:19419]
50. UNC13D ENSGALG00000002234 44 0.917 - - - - 0.917 - - - - - unc-13 homolog D [Source:HGNC Symbol;Acc:HGNC:23147]
51. COL25A1 ENSGALG00000039411 5 0.914 - - - - - - - - - 0.914 collagen type XXV alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:18603]
52. LYG2 ENSGALG00000016761 7 0.914 - - - - - - - - - 0.914 lysozyme g2 [Source:NCBI gene;Acc:395708]
53. SNORA53 SNORA53 6 0.914 - - - - - - - - - 0.914
54. CKV6.3 CKV6.3 13 0.914 - - - - - - - - - 0.914
55. CUBN ENSGALG00000008704 21 0.914 - - - - - - - - - 0.914 cubilin [Source:HGNC Symbol;Acc:HGNC:2548]
56. XKRX ENSGALG00000006637 13 0.914 - - - - - - - - - 0.914 XK related, X-linked, transcript variant X4
57. VIPR1 ENSGALG00000005259 3 0.914 - - - - - - - - - 0.914 vasoactive intestinal peptide receptor 1 [Source:NCBI gene;Acc:395329]
58. ENSGALG00000026222 ENSGALG00000026222 3 0.914 - - - - - - - - - 0.914
59. BF1 ENSGALG00000033932 18 0.914 - - - - - - - - - 0.914 MHC BF1 class I [Source:NCBI gene;Acc:693260]
60. PAX2 ENSGALG00000005689 351 0.912 - - - - - 0.912 - - - - paired box 2 [Source:NCBI gene;Acc:395574]
61. AREG ENSGALG00000010866 16 0.902 - - - - - - - - - 0.902 amphiregulin [Source:NCBI gene;Acc:428752]
62. SORL1 ENSGALG00000006598 39 0.899 - - - - - - - - - 0.899 sortilin related receptor 1 [Source:NCBI gene;Acc:395998]
63. MANSC4 32 0.897 - - - - - - - - - 0.897 MANSC domain containing 4, transcript variant X1
64. MOCOS ENSGALG00000013149 25 0.896 - - - - - - - 0.896 - - molybdenum cofactor sulfurase [Source:HGNC Symbol;Acc:HGNC:18234]
65. ENTPD5 ENSGALG00000010202 69 0.895 - - - - - - - - - 0.895 ectonucleoside triphosphate diphosphohydrolase 5 [Source:HGNC Symbol;Acc:HGNC:3367]
66. GABRB4 GABRB4 12 0.894 - - - - - - - - - 0.894
67. PEAK1 ENSGALG00000002759 39 0.894 - - - - - - - - - 0.894 pseudopodium enriched atypical kinase 1 [Source:NCBI gene;Acc:100857260]
68. GABRG4 GABRG4 16 0.892 - - - - - - - - - 0.892
69. COL23A1 ENSGALG00000006708 181 0.891 - - - - - - - - - 0.891 collagen type XXIII alpha 1 chain, transcript variant X1
70. CHSY3 ENSGALG00000026899 80 0.887 - - - - - - - - - 0.887 chondroitin sulfate synthase 3 [Source:HGNC Symbol;Acc:HGNC:24293]
71. TC2N ENSGALG00000010738 92 0.887 - - - - - - - - - 0.887 tandem C2 domains, nuclear [Source:HGNC Symbol;Acc:HGNC:19859]
72. FAM126B ENSGALG00000020869 19 0.886 - - - - - - - - - 0.886 family with sequence similarity 126 member B [Source:HGNC Symbol;Acc:HGNC:28593]
73. IKZF1 ENSGALG00000013086 58 0.876 - - - - - - - - - 0.876 IKAROS family zinc finger 1 [Source:NCBI gene;Acc:395974]
74. UTS2RL ENSGALG00000012419 118 0.867 - - - - - - - - - 0.867 urotensin-2 receptor-like
75. ZFAT ENSGALG00000037698 34 0.864 - - - - - - - - - 0.864 zinc finger and AT-hook domain containing [Source:HGNC Symbol;Acc:HGNC:19899]
76. FRRS1 ENSGALG00000005418 332 0.863 - - - - - - - - - 0.863 ferric chelate reductase 1 [Source:HGNC Symbol;Acc:HGNC:27622]
77. EPG5 ENSGALG00000036259 71 0.862 - - - - - - - - - 0.862 ectopic P-granules autophagy protein 5 homolog [Source:HGNC Symbol;Acc:HGNC:29331]
78. ARHGAP15 ENSGALG00000012421 58 0.849 - - - - - - - - - 0.849 Rho GTPase activating protein 15 [Source:NCBI gene;Acc:424303]
79. MUC5B MUC5B 62 0.844 - - - - - - - - - 0.844
80. PIK3C2G ENSGALG00000013117 53 0.844 - - - - - - - - - 0.844 phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma [Source:HGNC Symbol;Acc:HGNC:8973]
81. HIPK1 ENSGALG00000001939 26 0.841 - - - - - - - 0.841 - - homeodomain interacting protein kinase 1 [Source:HGNC Symbol;Acc:HGNC:19006]
82. DGKE ENSGALG00000003131 17 0.84 - - - - - - - - - 0.840 diacylglycerol kinase epsilon [Source:HGNC Symbol;Acc:HGNC:2852]
83. PRLR ENSGALG00000003446 19 0.839 - - - - - - - - - 0.839 prolactin receptor [Source:NCBI gene;Acc:395660]
84. SYDE2 ENSGALG00000038776 192 0.839 - - - - - - - - - 0.839 synapse defective Rho GTPase homolog 2 [Source:HGNC Symbol;Acc:HGNC:25841]
85. CCDC39 ENSGALG00000021855 23 0.836 - - - - - - - - - 0.836 coiled-coil domain containing 39
86. TMTC1 ENSGALG00000012956 160 0.833 - - - - - - - - - 0.833 transmembrane and tetratricopeptide repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:24099]
87. SERPINB14 SERPINB14 196 0.832 - - - - - - - - - 0.832
88. KIAA1549L ENSGALG00000012020 33 0.832 - - - - - - - - - 0.832 KIAA1549 like [Source:HGNC Symbol;Acc:HGNC:24836]
89. CCDC147 CCDC147 53 0.832 - - - - - - - - - 0.832
90. FMN1 ENSGALG00000009723 100 0.831 - - - - - - - - - 0.831 formin 1 [Source:NCBI gene;Acc:386747]
91. MYH1G ENSGALG00000028612 7 0.829 - - - - - - - - - 0.829 Gallus gallus myosin, heavy chain 1G, skeletal muscle (MYH1G), mRNA. [Source:RefSeq mRNA;Acc:NM_001319016]
92. LOC417937 ENSGALG00000011717 31 0.827 - - - - - - - - - 0.827 solute carrier family 23 member 1-like, transcript variant X1
93. TRIM27.1 ENSGALG00000030397 19 0.827 - - - - - 0.827 - - - - tripartite motif containing 27.1 [Source:NCBI gene;Acc:417042]
94. LRBA ENSGALG00000010061 67 0.826 - - - - - - - - - 0.826 LPS responsive beige-like anchor protein [Source:HGNC Symbol;Acc:HGNC:1742]
95. IL34 ENSGALG00000028466 270 0.824 - - - - - - - - - 0.824 interleukin 34
96. MKNK2 ENSGALG00000003845 1 0.823 - - - - - 0.823 - - - - MAP kinase interacting serine/threonine kinase 2 [Source:HGNC Symbol;Acc:HGNC:7111]
97. FAM3D ENSGALG00000007152 4 0.823 - - - - - 0.823 - - - - family with sequence similarity 3 member D [Source:HGNC Symbol;Acc:HGNC:18665]
98. RHCG ENSGALG00000006635 7 0.823 - - - - - 0.823 - - - - Rh family C glycoprotein [Source:NCBI gene;Acc:415490]
99. RNF169 ENSGALG00000017309 8 0.823 - - - - - 0.823 - - - - ring finger protein 169 [Source:HGNC Symbol;Acc:HGNC:26961]
100. HSD17B14 ENSGALG00000007727 3 0.823 - - - - - 0.823 - - - - hydroxysteroid 17-beta dehydrogenase 14

There are 145 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA