Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CDK8

Gene Name Gene ID Reads Annotation
CDK8 ENSGALG00000017104 5956 cyclin dependent kinase 8, transcript variant X4











Genes with expression patterns similar to CDK8

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CDK8 ENSGALG00000017104 5956 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cyclin dependent kinase 8, transcript variant X4
2. GLRX3 ENSGALG00000010464 22578 2.263 - - - 0.775 - - 0.788 - - 0.700 glutaredoxin 3 [Source:NCBI gene;Acc:423968]
3. TOR1AIP1 ENSGALG00000029238 5843 2.14 - - - 0.717 - - 0.718 - - 0.705 torsin 1A interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29456]
4. KCNK5 ENSGALG00000034077 3233 1.659 - - - 0.793 - - - 0.866 - - potassium two pore domain channel subfamily K member 5 [Source:HGNC Symbol;Acc:HGNC:6280]
5. KPNA1 ENSGALG00000014426 2724 1.638 - - - - - - 0.773 0.865 - - karyopherin subunit alpha 1 [Source:NCBI gene;Acc:418271]
6. PAXIP1 ENSGALG00000036064 3120 1.627 - - - 0.787 - - 0.840 - - - PAX interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8624]
7. MRPS30 ENSGALG00000014874 3416 1.618 - - - 0.839 - - 0.779 - - - mitochondrial ribosomal protein S30 [Source:NCBI gene;Acc:395781]
8. ANGIOPOIETIN-2 ANGIOPOIETIN-2 920 1.616 - - - 0.753 - - - 0.863 - -
9. NUBP1 ENSGALG00000007241 3791 1.604 - - - 0.735 - - 0.869 - - - nucleotide binding protein 1 [Source:NCBI gene;Acc:416634]
10. CLIP1 ENSGALG00000004467 1058 1.601 - - - - - - - 0.863 - 0.738 CAP-Gly domain containing linker protein 1 [Source:NCBI gene;Acc:395784]
11. TGS1 ENSGALG00000015340 5897 1.594 - - - 0.814 - - 0.780 - - - trimethylguanosine synthase 1 [Source:NCBI gene;Acc:421126]
12. SLC25A14 ENSGALG00000004063 5574 1.589 - - - 0.737 - - - 0.852 - - solute carrier family 25 member 14 [Source:NCBI gene;Acc:422141]
13. RAVER2 ENSGALG00000033759 4283 1.581 - - - 0.808 - - 0.773 - - - ribonucleoprotein, PTB binding 2 [Source:HGNC Symbol;Acc:HGNC:25577]
14. PM20D1 ENSGALG00000000724 2108 1.566 - - - 0.703 - - - 0.863 - - peptidase M20 domain containing 1 [Source:NCBI gene;Acc:419838]
15. ATPAF1 ENSGALG00000010444 3677 1.557 - - - - - - - 0.853 - 0.704 ATP synthase mitochondrial F1 complex assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:18803]
16. ZBTB16 ENSGALG00000038540 5544 1.554 - - - 0.764 - - 0.790 - - - Gallus gallus zinc finger and BTB domain containing 32 (ZBTB32), mRNA. [Source:RefSeq mRNA;Acc:NM_001321488]
17. GAS2L3 ENSGALG00000028373 1452 1.548 - - - 0.770 - - 0.778 - - - growth arrest specific 2 like 3 [Source:NCBI gene;Acc:417931]
18. IDI1 ENSGALG00000006723 7761 1.541 - - - 0.721 - - - 0.820 - - isopentenyl-diphosphate delta isomerase 1, transcript variant X1
19. RSL1D1 ENSGALG00000033690 13638 1.54 - - - - - - 0.806 0.734 - - ribosomal L1 domain containing 1 [Source:NCBI gene;Acc:416416]
20. FAM133B 9239 1.533 - - - 0.782 - - 0.751 - - - family with sequence similarity 133 member B
21. SESN1 ENSGALG00000015286 2387 1.53 - - - 0.797 - - - - - 0.733 sestrin 1 [Source:HGNC Symbol;Acc:HGNC:21595]
22. AKT1 ENSGALG00000011620 4089 1.529 - - - 0.812 - - 0.717 - - - AKT serine/threonine kinase 1 [Source:NCBI gene;Acc:395928]
23. ABHD17B ENSGALG00000015139 2805 1.528 - - - 0.779 - - 0.749 - - - abhydrolase domain containing 17B [Source:NCBI gene;Acc:427252]
24. MAP2 ENSGALG00000002789 6597 1.525 - - - - - - 0.706 0.819 - - microtubule associated protein 2, transcript variant X33
25. GSTO1 ENSGALG00000008409 7561 1.523 - - - - - - 0.706 0.817 - - glutathione S-transferase omega 1 [Source:NCBI gene;Acc:423881]
26. DPYSL2 ENSGALG00000000227 9668 1.52 - - - - - - 0.762 0.758 - - dihydropyrimidinase like 2 [Source:NCBI gene;Acc:395155]
27. PHF2 ENSGALG00000039208 2003 1.518 - - - 0.783 - - - - - 0.735 PHD finger protein 2 [Source:HGNC Symbol;Acc:HGNC:8920]
28. MRPL40 ENSGALG00000001587 20893 1.516 - - - 0.746 - - 0.770 - - - mitochondrial ribosomal protein L40 [Source:HGNC Symbol;Acc:HGNC:14491]
29. WDR45B ENSGALG00000001563 5870 1.514 - - - 0.724 - - 0.790 - - - WD repeat domain 45B [Source:NCBI gene;Acc:417339]
30. KIF2C ENSGALG00000010120 8999 1.507 - - - - - - 0.761 0.746 - - kinesin family member 2C, transcript variant X1
31. KIAA1671 ENSGALG00000005512 2540 1.502 - - - - - - 0.735 - - 0.767 KIAA1671 [Source:NCBI gene;Acc:768701]
32. CHD7 ENSGALG00000041080 10201 1.498 - - - - - - 0.767 - - 0.731 chromodomain helicase DNA binding protein 7 [Source:NCBI gene;Acc:421140]
33. CDC42BPB ENSGALG00000011432 8220 1.494 - - - 0.752 - - 0.742 - - - CDC42 binding protein kinase beta [Source:HGNC Symbol;Acc:HGNC:1738]
34. PFKL ENSGALG00000006543 4361 1.487 - - - 0.777 - - 0.710 - - - Gallus gallus phosphofructokinase, liver type (PFKL), mRNA. [Source:RefSeq mRNA;Acc:NM_001318442]
35. MRPL32 ENSGALG00000037258 6861 1.486 - - - 0.760 - - - - - 0.726 mitochondrial ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:14035]
36. SPSB1 ENSGALG00000002506 2205 1.486 - - - 0.737 - - 0.749 - - - splA/ryanodine receptor domain and SOCS box containing 1 [Source:HGNC Symbol;Acc:HGNC:30628]
37. C1orf21 ENSGALG00000020922 4035 1.481 - - - 0.756 - - 0.725 - - - chromosome 1 open reading frame 21 [Source:HGNC Symbol;Acc:HGNC:15494]
38. ST5 6869 1.48 - - - 0.737 - - 0.743 - - - suppression of tumorigenicity 5, transcript variant X1
39. SF3B3 ENSGALG00000002531 19397 1.477 - - - 0.723 - - 0.754 - - - splicing factor 3b subunit 3, transcript variant X2
40. CSNK1G1 ENSGALG00000030812 31618 1.467 - - - - - - 0.757 0.710 - - casein kinase 1 gamma 1 [Source:NCBI gene;Acc:415328]
41. CTNNBIP1 ENSGALG00000026306 8049 1.464 - - - 0.713 - - 0.751 - - - catenin beta interacting protein 1 [Source:NCBI gene;Acc:771460]
42. ATR ENSGALG00000002663 4626 1.463 - - - 0.752 - - 0.711 - - - ATR serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:882]
43. ARHGAP11A ENSGALG00000009731 6817 1.426 - - - - - - 0.707 - - 0.719 Rho GTPase activating protein 11A [Source:NCBI gene;Acc:423289]
44. SPINZ SPINZ 10341 0.98 - - - - - - - 0.980 - -
45. UBP1 ENSGALG00000035630 13359 0.95 - - - - - - - 0.950 - - upstream binding protein 1 [Source:HGNC Symbol;Acc:HGNC:12507]
46. MRPL14 ENSGALG00000010285 11820 0.927 - - - - - - - 0.927 - - mitochondrial ribosomal protein L14 [Source:HGNC Symbol;Acc:HGNC:14279]
47. RAB24 ENSGALG00000002984 6264 0.872 - - - - - - - 0.872 - - RAB24, member RAS oncogene family [Source:NCBI gene;Acc:427627]
48. ISCA1 ENSGALG00000012606 10342 0.872 - - - - - - - 0.872 - - iron-sulfur cluster assembly 1 [Source:NCBI gene;Acc:427463]
49. NOVA1 ENSGALG00000009850 7584 0.868 - - - - - - - 0.868 - - uncharacterized LOC423300 [Source:NCBI gene;Acc:423300]
50. OTUD4 ENSGALG00000009968 3919 0.867 - - - - - - - 0.867 - - OTU deubiquitinase 4 [Source:HGNC Symbol;Acc:HGNC:24949]
51. HHIP ENSGALG00000009948 1536 0.867 - - - - - - - 0.867 - - hedgehog interacting protein [Source:HGNC Symbol;Acc:HGNC:14866]
52. RPB6 RPB6 9517 0.867 - - - - - - - 0.867 - -
53. CASK ENSGALG00000042400 8485 0.866 - - - - - - 0.866 - - - calcium/calmodulin dependent serine protein kinase [Source:HGNC Symbol;Acc:HGNC:1497]
54. SHROOM2 ENSGALG00000030802 4517 0.866 - - - - - - - 0.866 - - shroom family member 2 [Source:HGNC Symbol;Acc:HGNC:630]
55. GNG10 ENSGALG00000015683 6905 0.866 - - - - - - - 0.866 - - G protein subunit gamma 10 [Source:NCBI gene;Acc:769603]
56. CCDC167 ENSGALG00000010151 3567 0.866 - - - - - - - 0.866 - - coiled-coil domain containing 167 [Source:NCBI gene;Acc:421433]
57. MPPED1 ENSGALG00000014186 5726 0.866 - - - - - - 0.866 - - - metallophosphoesterase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1306]
58. MRPS7 ENSGALG00000007999 5445 0.865 - - - - - - - 0.865 - - mitochondrial ribosomal protein S7 [Source:NCBI gene;Acc:422122]
59. MFF ENSGALG00000003079 5289 0.865 - - - - - - - 0.865 - - mitochondrial fission factor [Source:HGNC Symbol;Acc:HGNC:24858]
60. WDR91 ENSGALG00000011724 5787 0.865 - - - - - - - 0.865 - - WD repeat domain 91 [Source:NCBI gene;Acc:417939]
61. LYRM4 ENSGALG00000027339 2917 0.864 - - - - - - - 0.864 - - LYR motif containing 4 [Source:NCBI gene;Acc:420874]
62. POLR3H ENSGALG00000011947 2899 0.864 - - - - - - - 0.864 - - RNA polymerase III subunit H [Source:NCBI gene;Acc:417990]
63. GOT2 ENSGALG00000002321 4961 0.864 - - - - - - - 0.864 - - glutamic-oxaloacetic transaminase 2 [Source:NCBI gene;Acc:396533]
64. MRPS31 ENSGALG00000017033 9287 0.864 - - - - - - - 0.864 - - mitochondrial ribosomal protein S31 [Source:HGNC Symbol;Acc:HGNC:16632]
65. TCTEX1D2 ENSGALG00000027722 2201 0.864 - - - - - - - 0.864 - - Tctex1 domain containing 2
66. TNFRSF11B ENSGALG00000043167 911 0.864 - - - - - - - 0.864 - - TNF receptor superfamily member 11b [Source:NCBI gene;Acc:378803]
67. ELMO2 ENSGALG00000007246 4569 0.863 - - - - - - - 0.863 - - engulfment and cell motility 2 [Source:HGNC Symbol;Acc:HGNC:17233]
68. LGMN ENSGALG00000010811 7401 0.863 - - - - - - - 0.863 - - legumain [Source:HGNC Symbol;Acc:HGNC:9472]
69. TNPO3 ENSGALG00000039420 5178 0.863 - - - - - - - 0.863 - - transportin 3 [Source:HGNC Symbol;Acc:HGNC:17103]
70. C26H6ORF106 C26H6ORF106 2168 0.863 - - - - - - - 0.863 - -
71. CEP192 ENSGALG00000035625 2270 0.863 - - - - - - - 0.863 - - centrosomal protein 192 [Source:HGNC Symbol;Acc:HGNC:25515]
72. CAPZA1 ENSGALG00000001547 24242 0.862 - - - - - - - 0.862 - - capping actin protein of muscle Z-line alpha subunit 1 [Source:NCBI gene;Acc:396521]
73. EEFSEC ENSGALG00000038684 298 0.862 - - - - - - - 0.862 - - eukaryotic elongation factor, selenocysteine-tRNA specific [Source:HGNC Symbol;Acc:HGNC:24614]
74. B9D1 ENSGALG00000005096 760 0.862 - - - - - - - 0.862 - - B9 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24123]
75. COL14A1 ENSGALG00000037675 2652 0.862 - - - - - - - 0.862 - - collagen type XIV alpha 1 chain [Source:NCBI gene;Acc:396276]
76. EPM2A ENSGALG00000012275 872 0.862 - - - - - - - 0.862 - - EPM2A, laforin glucan phosphatase [Source:NCBI gene;Acc:421611]
77. TLE3 ENSGALG00000008120 2655 0.862 - - - - - - - 0.862 - - transducin like enhancer of split 3, transcript variant X10
78. PRKAR2A ENSGALG00000007023 909 0.862 - - - - - - - 0.862 - - protein kinase cAMP-dependent type II regulatory subunit alpha [Source:HGNC Symbol;Acc:HGNC:9391]
79. BMP5 ENSGALG00000016293 2119 0.862 - - - - - - - 0.862 - - bone morphogenetic protein 5 [Source:NCBI gene;Acc:396053]
80. SGCE ENSGALG00000009670 3070 0.861 - - - - - - - 0.861 - - sarcoglycan epsilon [Source:HGNC Symbol;Acc:HGNC:10808]
81. CYB5B ENSGALG00000000660 9733 0.861 - - - - - - - 0.861 - - cytochrome b5 type B [Source:NCBI gene;Acc:415865]
82. ARFGAP3 ENSGALG00000014140 4612 0.86 - - - - - - - 0.860 - - ADP ribosylation factor GTPase activating protein 3 [Source:NCBI gene;Acc:418224]
83. CELF1 ENSGALG00000008097 4717 0.86 - - - - - - 0.860 - - - CUGBP Elav-like family member 1 [Source:NCBI gene;Acc:373923]
84. UPF3B ENSGALG00000008618 12350 0.858 - - - - - - - 0.858 - - UPF3B, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:20439]
85. PES1 ENSGALG00000007778 12248 0.857 - - - - - - 0.857 - - - pescadillo ribosomal biogenesis factor 1 [Source:HGNC Symbol;Acc:HGNC:8848]
86. PDIA5 ENSGALG00000011689 6913 0.857 - - - - - - - 0.857 - - protein disulfide isomerase family A member 5 [Source:HGNC Symbol;Acc:HGNC:24811]
87. TRMT10A ENSGALG00000012264 2467 0.855 - - - - - - - 0.855 - - tRNA methyltransferase 10A [Source:HGNC Symbol;Acc:HGNC:28403]
88. SERPINH1 ENSGALG00000011214 15311 0.855 - - - - - - - 0.855 - - serpin family H member 1 [Source:NCBI gene;Acc:396228]
89. FAM136A ENSGALG00000042163 39487 0.854 - - - - - - - 0.854 - - family with sequence similarity 136 member A [Source:NCBI gene;Acc:426296]
90. NMD3 ENSGALG00000009533 8726 0.854 - - - - - - - 0.854 - - NMD3 ribosome export adaptor [Source:HGNC Symbol;Acc:HGNC:24250]
91. ENSGALG00000002595 ENSGALG00000002595 32163 0.853 - - - - - - - 0.853 - -
92. BRMS1L ENSGALG00000010093 4964 0.853 - - - - - - - 0.853 - - BRMS1 like transcriptional repressor [Source:NCBI gene;Acc:423328]
93. TPRKB ENSGALG00000013018 8687 0.852 - - - - - - 0.852 - - - TP53RK binding protein [Source:HGNC Symbol;Acc:HGNC:24259]
94. TRIM9 ENSGALG00000012367 1267 0.851 - - - - - - - 0.851 - - tripartite motif containing 9 [Source:HGNC Symbol;Acc:HGNC:16288]
95. RNPC3 ENSGALG00000005162 269 0.851 - - - 0.851 - - - - - - RNA binding region (RNP1, RRM) containing 3 [Source:HGNC Symbol;Acc:HGNC:18666]
96. CNOT6 ENSGALG00000034316 10496 0.85 - - - - - - - 0.850 - - CCR4-NOT transcription complex subunit 6 [Source:HGNC Symbol;Acc:HGNC:14099]
97. ARID4A ENSGALG00000012037 8554 0.849 - - - - - - - 0.849 - - AT-rich interaction domain 4A [Source:NCBI gene;Acc:423541]
98. L3HYPDH ENSGALG00000012011 2212 0.849 - - - - - - - 0.849 - - trans-L-3-hydroxyproline dehydratase [Source:HGNC Symbol;Acc:HGNC:20488]
99. PTP4A1 ENSGALG00000016271 23953 0.844 - - - - - - - 0.844 - - protein tyrosine phosphatase type IVA, member 1 [Source:NCBI gene;Acc:421877]
100. CAT ENSGALG00000030187 7534 0.843 - - - - - - - 0.843 - - catalase [Source:NCBI gene;Acc:423600]

There are 643 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA