Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CDK5RAP3

Gene Name Gene ID Reads Annotation
CDK5RAP3 ENSGALG00000036452 693 CDK5 regulatory subunit associated protein 3 [Source:NCBI gene;Acc:430350]











Genes with expression patterns similar to CDK5RAP3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CDK5RAP3 ENSGALG00000036452 693 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 CDK5 regulatory subunit associated protein 3 [Source:NCBI gene;Acc:430350]
2. RAD54L2 ENSGALG00000003243 187 2.322 - - - - - - - 0.814 0.760 0.748 RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
3. SEMA3A ENSGALG00000006560 170 1.577 - - 0.739 - - - - 0.838 - - semaphorin 3A [Source:NCBI gene;Acc:395825]
4. DBN1 ENSGALG00000033405 216 1.531 - - - - - - - 0.828 0.703 - drebrin 1 [Source:NCBI gene;Acc:396496]
5. NIPAL3 ENSGALG00000004268 37 0.902 - - - - - - 0.902 - - - NIPA like domain containing 3 [Source:HGNC Symbol;Acc:HGNC:25233]
6. ENSGALG00000020972 ENSGALG00000020972 54 0.86 - - - - - - - 0.860 - -
7. MAP3K13 ENSGALG00000006655 632 0.853 - - - - - - - 0.853 - - mitogen-activated protein kinase kinase kinase 13 [Source:HGNC Symbol;Acc:HGNC:6852]
8. RFX3 ENSGALG00000010179 305 0.844 - - - - - - - - 0.844 - regulatory factor X3 [Source:HGNC Symbol;Acc:HGNC:9984]
9. PDZRN4 ENSGALG00000009530 832 0.84 - - - - - - - 0.840 - - PDZ domain containing ring finger 4 [Source:HGNC Symbol;Acc:HGNC:30552]
10. DOCK9 ENSGALG00000016883 128 0.839 - - - - - - - - - 0.839 dedicator of cytokinesis 9 [Source:HGNC Symbol;Acc:HGNC:14132]
11. LRRC58 ENSGALG00000033186 15 0.839 - - - - - - - 0.839 - - leucine rich repeat containing 58 [Source:HGNC Symbol;Acc:HGNC:26968]
12. FAM178A FAM178A 2738 0.834 - - - - - - - - - 0.834
13. PROCA1 668 0.833 - - - - - - - 0.833 - - protein interacting with cyclin A1
14. COL21A1 ENSGALG00000016292 35 0.831 - - 0.831 - - - - - - - collagen type XXI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:17025]
15. PLEKHH2 ENSGALG00000009947 6384 0.831 - - - - - - - - 0.831 - pleckstrin homology, MyTH4 and FERM domain containing H2 [Source:HGNC Symbol;Acc:HGNC:30506]
16. SWAP70 ENSGALG00000005750 32 0.831 - - - - - - - 0.831 - - switching B cell complex subunit SWAP70 [Source:NCBI gene;Acc:423044]
17. CCDC53 CCDC53 3732 0.829 - - - - - - - - 0.829 -
18. SLC30A8 ENSGALG00000034377 3 0.828 - - - - - - - 0.828 - - solute carrier family 30 member 8 [Source:HGNC Symbol;Acc:HGNC:20303]
19. ENSGALG00000023353 ENSGALG00000023353 1 0.828 - - - - - - - 0.828 - -
20. CD101 12 0.828 - - - - - - - 0.828 - - CD101 molecule, transcript variant X4
21. GP5 ENSGALG00000045125 3 0.828 - - - - - - - 0.828 - - glycoprotein V platelet [Source:HGNC Symbol;Acc:HGNC:4443]
22. CDHR1 ENSGALG00000002314 24 0.828 - - - - - - - 0.828 - - cadherin related family member 1 [Source:NCBI gene;Acc:414847]
23. GSAP ENSGALG00000008312 12 0.828 - - - - - - - 0.828 - - gamma-secretase activating protein [Source:HGNC Symbol;Acc:HGNC:28042]
24. SOX10 ENSGALG00000012290 3942 0.828 - - - - - - - 0.828 - - SRY-box 10 [Source:NCBI gene;Acc:395573]
25. ENSGALG00000028652 ENSGALG00000028652 65 0.828 - - - - - - - 0.828 - -
26. HBP1 ENSGALG00000008050 19 0.828 - - - - - - - 0.828 - - HMG-box transcription factor 1 [Source:NCBI gene;Acc:417705]
27. SUSD1 ENSGALG00000015677 12 0.828 - - - - - - - 0.828 - - sushi domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25413]
28. SFT2D2 ENSGALG00000019228 10 0.828 - - - - - - - 0.828 - - SFT2 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25140]
29. C1orf228 3 0.828 - - - - - - - 0.828 - - chromosome 1 open reading frame 228, transcript variant X5
30. GPR17 ENSGALG00000037153 3 0.828 - - - - - - - 0.828 - - G protein-coupled receptor 17 [Source:HGNC Symbol;Acc:HGNC:4471]
31. ENSGALG00000023027 ENSGALG00000023027 5 0.828 - - - - - - - 0.828 - -
32. GABRA5 ENSGALG00000016744 12 0.828 - - - - - - - 0.828 - - gamma-aminobutyric acid type A receptor alpha5 subunit [Source:HGNC Symbol;Acc:HGNC:4079]
33. ACACB 6 0.828 - - - - - - - 0.828 - - acetyl-CoA carboxylase beta
34. SPATA4 ENSGALG00000010822 4 0.828 - - - - - - - 0.828 - - spermatogenesis associated 4 [Source:NCBI gene;Acc:422571]
35. TREM-B1 ENSGALG00000003361 8 0.828 - - - - - - - 0.828 - - triggering receptor expressed on myeloid cells B1 [Source:NCBI gene;Acc:768535]
36. GTPBP6 ENSGALG00000016717 17 0.828 - - - - - - - 0.828 - - GTP binding protein 6 (putative) [Source:HGNC Symbol;Acc:HGNC:30189]
37. MUC13 7 0.828 - - - - - - - 0.828 - - mucin 13, cell surface associated, transcript variant X10
38. snoZ39 snoZ39 2 0.828 - - - - - - - 0.828 - -
39. FAM214B ENSGALG00000002069, ENSGALG00000038279 213 0.828 - - - - - - - 0.828 - - family with sequence similarity 214 member B, transcript variant X14
40. ALKBH3 ENSGALG00000041309 7 0.828 - - - - - - - 0.828 - - alkB homolog 3, alpha-ketoglutaratedependent dioxygenase [Source:NCBI gene;Acc:423169]
41. GABRA2 ENSGALG00000014206 19 0.828 - - - - - - - 0.828 - - gamma-aminobutyric acid type A receptor alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:4076]
42. SNORA21 SNORA21 396 0.826 - - - - - - - 0.826 - -
43. gga-mir-2954 ENSGALG00000026107 462 0.824 - - - - - - - 0.824 - - gga-mir-2954 [Source:miRBase;Acc:MI0013634]
44. WNK4 ENSGALG00000032191 962 0.823 - - - - - - - - - 0.823 WNK lysine deficient protein kinase 4 [Source:HGNC Symbol;Acc:HGNC:14544]
45. RAB43 ENSGALG00000005021 5 0.822 - - - - - - - 0.822 - - RAB43, member RAS oncogene family [Source:NCBI gene;Acc:415970]
46. HOXA1 ENSGALG00000028095 137 0.821 - - 0.821 - - - - - - - homeobox A1 [Source:HGNC Symbol;Acc:HGNC:5099]
47. ECSCR ENSGALG00000024379 313 0.82 - - - - - - - 0.820 - - endothelial cell surface expressed chemotaxis and apoptosis regulator, transcript variant X2
48. ENSGALG00000026756 ENSGALG00000026756 134 0.82 - - - - - - - 0.820 - -
49. NMRAL1 ENSGALG00000029820 29 0.82 - - - - - - - 0.820 - - NmrA like redox sensor 1 [Source:NCBI gene;Acc:416672]
50. SRRL ENSGALG00000002638 26 0.82 - - - - - - - 0.820 - - serine racemase-like, transcript variant X8
51. PTPRQ ENSGALG00000010935 626 0.82 - - - - - - - 0.820 - - protein tyrosine phosphatase, receptor type Q [Source:HGNC Symbol;Acc:HGNC:9679]
52. BFIV21 BFIV21 30 0.82 - - - - - - - 0.820 - -
53. URB2 ENSGALG00000011101 12 0.82 - - - - - - - 0.820 - - URB2 ribosome biogenesis 2 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:HGNC:28967]
54. ENSGALG00000012518 ENSGALG00000012518 25 0.813 - - 0.813 - - - - - - -
55. PTBP3 ENSGALG00000015669 16 0.81 - - - - - - - 0.810 - - polypyrimidine tract binding protein 3 [Source:HGNC Symbol;Acc:HGNC:10253]
56. PAFAH1B2 ENSGALG00000027918 418 0.806 - - - - - - - - 0.806 - platelet activating factor acetylhydrolase 1b catalytic subunit 2 [Source:NCBI gene;Acc:419765]
57. TOM1L2 ENSGALG00000004902 89 0.804 - - - - - - - 0.804 - - target of myb1 like 2 membrane trafficking protein [Source:NCBI gene;Acc:416509]
58. TLN1 ENSGALG00000002548 489 0.804 - - - - - - - - - 0.804 talin 1 [Source:NCBI gene;Acc:395194]
59. DGKH ENSGALG00000016959 75 0.802 - - 0.802 - - - - - - - diacylglycerol kinase eta [Source:HGNC Symbol;Acc:HGNC:2854]
60. ATP6AP2 ENSGALG00000016241 257 0.802 - - - - - - - - - 0.802 ATPase H+ transporting accessory protein 2 [Source:NCBI gene;Acc:418573]
61. UPRT ENSGALG00000007793 321 0.801 - - - - - - - 0.801 - - uracil phosphoribosyltransferase homolog [Source:NCBI gene;Acc:422327]
62. RAX1 RAX1 44 0.799 - - 0.799 - - - - - - -
63. BCLAF1 ENSGALG00000013935 7596 0.797 - - - - - - - - 0.797 - BCL2 associated transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:16863]
64. DZIP1L 45 0.797 - - - - - - 0.797 - - - DAZ interacting zinc finger protein 1 like, transcript variant X1
65. AARS2 ENSGALG00000035337 1761 0.796 - - - - - - - - 0.796 - alanyl-tRNA synthetase 2, mitochondrial [Source:NCBI gene;Acc:421436]
66. PPP4R1 ENSGALG00000032092 1135 0.795 - - - - - - - - - 0.795 protein phosphatase 4 regulatory subunit 1 [Source:HGNC Symbol;Acc:HGNC:9320]
67. PRKRIR PRKRIR 46 0.795 - - - - - - - 0.795 - -
68. INSC ENSGALG00000032558 74 0.795 - - - - - - - 0.795 - - INSC, spindle orientation adaptor protein [Source:HGNC Symbol;Acc:HGNC:33116]
69. PRODH ENSGALG00000007728 1659 0.794 - - - - - - - - - 0.794 proline dehydrogenase 1
70. ZNF839 ENSGALG00000011368 148 0.792 - - - - - - - - - 0.792 zinc finger protein 839 [Source:HGNC Symbol;Acc:HGNC:20345]
71. PRTFDC1 ENSGALG00000007694 111 0.791 - - - - - - - - - 0.791 phosphoribosyl transferase domain containing 1 [Source:NCBI gene;Acc:420499]
72. ATL2 ENSGALG00000037289 7926 0.791 - - - - - - - - 0.791 - atlastin GTPase 2 [Source:HGNC Symbol;Acc:HGNC:24047]
73. TSSC1 42 0.79 - - - - - - - 0.790 - - tumor suppressing subtransferable candidate 1, transcript variant X1
74. PLCG2 ENSGALG00000033507 348 0.784 - - - - - - - - - 0.784 phospholipase C gamma 2 [Source:HGNC Symbol;Acc:HGNC:9066]
75. MEAF6 ENSGALG00000002013 2208 0.784 - - - - - - - - - 0.784 MYST/Esa1 associated factor 6 [Source:NCBI gene;Acc:419617]
76. CSMD3 ENSGALG00000031578 23 0.784 - - - - - - - - - 0.784 CUB and Sushi multiple domains 3 [Source:HGNC Symbol;Acc:HGNC:19291]
77. ZNF384 ENSGALG00000032599 2369 0.782 - - - - - - - - 0.782 - zinc finger protein 384 [Source:NCBI gene;Acc:770350]
78. CFD ENSGALG00000040832 222 0.782 - - 0.782 - - - - - - - complement factor D [Source:HGNC Symbol;Acc:HGNC:2771]
79. ENSGALG00000008594 ENSGALG00000008594 54 0.782 - - 0.782 - - - - - - -
80. APBA1 ENSGALG00000015111 261 0.781 - - - - - - - - - 0.781 amyloid beta precursor protein binding family A member 1 [Source:HGNC Symbol;Acc:HGNC:578]
81. HECTD2 ENSGALG00000038043 177 0.78 - - - - - - - 0.780 - - HECT domain E3 ubiquitin protein ligase 2 [Source:HGNC Symbol;Acc:HGNC:26736]
82. ZP1 ENSGALG00000031916 122 0.78 - - - - - - - 0.780 - - zona pellucida glycoprotein 1 [Source:NCBI gene;Acc:395418]
83. S1PR1 ENSGALG00000005208 12 0.778 - - - - - - - - - 0.778 sphingosine-1-phosphate receptor 1 [Source:HGNC Symbol;Acc:HGNC:3165]
84. SCL SCL 69 0.778 - - - - - - - - - 0.778
85. SNTA1 ENSGALG00000029694 3177 0.776 - - - - - - - - 0.776 - syntrophin alpha 1 [Source:HGNC Symbol;Acc:HGNC:11167]
86. IQUB ENSGALG00000008823 65 0.775 - - - - - - - 0.775 - - IQ motif and ubiquitin domain containing [Source:HGNC Symbol;Acc:HGNC:21995]
87. FER1L6 ENSGALG00000033783 196 0.774 - - - - - - - - - 0.774 fer-1 like family member 6 [Source:HGNC Symbol;Acc:HGNC:28065]
88. CHGB ENSGALG00000046616 357 0.774 - - - - - - - 0.774 - - chromogranin B [Source:HGNC Symbol;Acc:HGNC:1930]
89. HERPUD1 ENSGALG00000001220 18 0.773 - - - - - - - - - 0.773 homocysteine inducible ER protein with ubiquitin like domain 1 [Source:HGNC Symbol;Acc:HGNC:13744]
90. UPF3A ENSGALG00000016815 48 0.773 - - - - - - - - - 0.773 UPF3A, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:20332]
91. PWWP2B ENSGALG00000010491 30 0.772 - - - - - - - 0.772 - - PWWP domain containing 2B [Source:HGNC Symbol;Acc:HGNC:25150]
92. LPGAT1 ENSGALG00000009848 33 0.772 - - - - - - - - - 0.772 lysophosphatidylglycerol acyltransferase 1 [Source:NCBI gene;Acc:421375]
93. MARVELD2 ENSGALG00000027140 828 0.771 - - - - - - - - - 0.771 MARVEL domain containing 2 [Source:HGNC Symbol;Acc:HGNC:26401]
94. GAA ENSGALG00000038853 158 0.77 - - - - - - - - - 0.770 glucosidase alpha, acid [Source:HGNC Symbol;Acc:HGNC:4065]
95. GALE ENSGALG00000004047 150 0.77 - - - - - - 0.770 - - - UDP-galactose-4-epimerase [Source:HGNC Symbol;Acc:HGNC:4116]
96. IVD ENSGALG00000040267 5820 0.769 - - - - - - - - 0.769 - isovaleryl-CoA dehydrogenase [Source:NCBI gene;Acc:423011]
97. LANCL3 ENSGALG00000016265 9 0.769 - - - - - - - - - 0.769 LanC like 3 [Source:HGNC Symbol;Acc:HGNC:24767]
98. ENSGALG00000023735 ENSGALG00000023735 12 0.768 - - - - - - - 0.768 - -
99. EHD4 ENSGALG00000008950 22 0.768 - - - - - - - - - 0.768 EH domain containing 4 [Source:HGNC Symbol;Acc:HGNC:3245]
100. LOC416530 ENSGALG00000005291 207 0.768 - - - - - - - 0.768 - - uncharacterized LOC416530, transcript variant X1

There are 157 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA