Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CDK5RAP1

Gene Name Gene ID Reads Annotation
CDK5RAP1 ENSGALG00000006738 2628 CDK5 regulatory subunit associated protein 1 [Source:HGNC Symbol;Acc:HGNC:15880]











Genes with expression patterns similar to CDK5RAP1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CDK5RAP1 ENSGALG00000006738 2628 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 CDK5 regulatory subunit associated protein 1 [Source:HGNC Symbol;Acc:HGNC:15880]
2. GLI2 ENSGALG00000011630 3347 1.536 - - - - - - 0.830 0.706 - - GLI family zinc finger 2 [Source:NCBI gene;Acc:395956]
3. MOCS2 ENSGALG00000014906 4974 1.506 - - - - - - 0.738 0.768 - - molybdenum cofactor synthesis 2 [Source:HGNC Symbol;Acc:HGNC:7193]
4. ORC1 ENSGALG00000010623 2859 1.471 - - - - - - 0.726 0.745 - - origin recognition complex subunit 1 [Source:NCBI gene;Acc:424640]
5. C4orf27 C4orf27 16724 1.46 - - - - - - 0.753 0.707 - -
6. MRPL2 ENSGALG00000008597 16500 1.453 - - - - - - 0.721 0.732 - - mitochondrial ribosomal protein L2 [Source:HGNC Symbol;Acc:HGNC:14056]
7. NUP85 ENSGALG00000007974 21249 1.439 - - - - - - 0.706 0.733 - - nucleoporin 85 [Source:NCBI gene;Acc:422120]
8. HARS ENSGALG00000035080 11602 1.437 - - - - - - 0.707 0.730 - - histidyl-tRNA synthetase [Source:NCBI gene;Acc:416132]
9. PTK2 ENSGALG00000031741 13103 0.86 - - - - - - 0.860 - - - protein tyrosine kinase 2 [Source:NCBI gene;Acc:396416]
10. ASUN ASUN 17129 0.859 - - - - - - 0.859 - - -
11. CAPN15 ENSGALG00000002018 3353 0.857 - - - - - - - 0.857 - - calpain 15 [Source:HGNC Symbol;Acc:HGNC:11182]
12. RANGAP1 ENSGALG00000011966 20170 0.844 - - - - - - 0.844 - - - Ran GTPase activating protein 1 [Source:NCBI gene;Acc:417997]
13. WBSCR22 6082 0.836 - - - - - - - 0.836 - - Williams-Beuren syndrome chromosome region 22
14. LSM5 ENSGALG00000041625 22307 0.832 - - - - - - 0.832 - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420751]
15. EBNA1BP2 ENSGALG00000009045 17453 0.831 - - - - - - 0.831 - - - EBNA1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:15531]
16. ZADH2 ENSGALG00000022882 11790 0.829 - - - - - - - 0.829 - - zinc binding alcohol dehydrogenase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:28697]
17. PLAA ENSGALG00000001782 5459 0.829 - - - - - - 0.829 - - - phospholipase A2 activating protein [Source:HGNC Symbol;Acc:HGNC:9043]
18. ESRP1 ENSGALG00000031076 28 0.826 - - 0.826 - - - - - - - epithelial splicing regulatory protein 1 [Source:HGNC Symbol;Acc:HGNC:25966]
19. CCNG2 ENSGALG00000010347 9122 0.825 - - - - - - 0.825 - - - cyclin G2 [Source:HGNC Symbol;Acc:HGNC:1593]
20. CBWD1 ENSGALG00000010147 2765 0.823 - - - - - - 0.823 - - - COBW domain containing 1 [Source:NCBI gene;Acc:427347]
21. CHMP6 ENSGALG00000026428 18026 0.823 - - - - - - 0.823 - - - charged multivesicular body protein 6 [Source:NCBI gene;Acc:428673]
22. ERCC6L2 ENSGALG00000012621 77 0.821 - - 0.821 - - - - - - - excision repair cross-complementation group 6 like 2, transcript variant X8
23. METAP2 ENSGALG00000011377 16311 0.82 - - - - - - 0.820 - - - methionyl aminopeptidase 2 [Source:NCBI gene;Acc:417912]
24. TCP11L1 ENSGALG00000011688 2427 0.818 - - - - - - - 0.818 - - t-complex 11 like 1 [Source:NCBI gene;Acc:421594]
25. BAG5 ENSGALG00000031062 4498 0.817 - - - - - - 0.817 - - - BCL2 associated athanogene 5 [Source:NCBI gene;Acc:423482]
26. SMARCA5 ENSGALG00000009913 20059 0.815 - - - - - - 0.815 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:HGNC Symbol;Acc:HGNC:11101]
27. PROSC 6856 0.815 - - - - - - 0.815 - - - proline synthetase cotranscribed homolog (bacterial), transcript variant X1
28. PSMC3 ENSGALG00000008108 22922 0.815 - - - - - - 0.815 - - - proteasome 26S subunit, ATPase 3 [Source:NCBI gene;Acc:423182]
29. TARDBP ENSGALG00000002906 24748 0.814 - - - - - - 0.814 - - - TAR DNA binding protein [Source:NCBI gene;Acc:419453]
30. RAB24 ENSGALG00000002984 6264 0.813 - - - - - - 0.813 - - - RAB24, member RAS oncogene family [Source:NCBI gene;Acc:427627]
31. URI1 ENSGALG00000004506 6024 0.813 - - - - - - 0.813 - - - URI1, prefoldin like chaperone [Source:HGNC Symbol;Acc:HGNC:13236]
32. CZH9ORF80 CZH9ORF80 12760 0.812 - - - - - - 0.812 - - -
33. ISG12(2) ISG12(2) 146 0.812 - - 0.812 - - - - - - -
34. C1H12ORF23 C1H12ORF23 13234 0.811 - - - - - - 0.811 - - -
35. LY6E ENSGALG00000041621 16227 0.811 - - - - - - 0.811 - - - lymphocyte antigen 6 family member E [Source:NCBI gene;Acc:395550]
36. KIF2C ENSGALG00000010120 8999 0.811 - - - - - - 0.811 - - - kinesin family member 2C, transcript variant X1
37. YWHAZ ENSGALG00000031387 84985 0.811 - - - - - - 0.811 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
38. HGF/SF HGF/SF 345 0.81 - - 0.810 - - - - - - -
39. MZT1 ENSGALG00000016932 9269 0.808 - - - - - - 0.808 - - - mitotic spindle organizing protein 1 [Source:NCBI gene;Acc:418822]
40. NDUFS1 ENSGALG00000008606 7898 0.807 - - - - - - 0.807 - - - NADH:ubiquinone oxidoreductase core subunit S1 [Source:NCBI gene;Acc:424102]
41. PPIE ENSGALG00000013383 3923 0.807 - - - - - - - 0.807 - - peptidylprolyl isomerase E [Source:HGNC Symbol;Acc:HGNC:9258]
42. ACTR2 ENSGALG00000008779 17812 0.806 - - - - - - 0.806 - - - ARP2 actin related protein 2 homolog [Source:NCBI gene;Acc:396147]
43. TSPAN5 ENSGALG00000012227 8703 0.806 - - - - - - 0.806 - - - tetraspanin 5 [Source:HGNC Symbol;Acc:HGNC:17753]
44. SUDS3 ENSGALG00000007393 8322 0.805 - - - - - - 0.805 - - - SDS3 homolog, SIN3A corepressor complex component [Source:NCBI gene;Acc:427713]
45. TBCD ENSGALG00000001503 7880 0.804 - - - - - - 0.804 - - - tubulin folding cofactor D [Source:NCBI gene;Acc:417334]
46. PROX1 ENSGALG00000009791 1184 0.802 - - - - - - 0.802 - - - prospero homeobox 1 [Source:NCBI gene;Acc:395802]
47. MRPL37 ENSGALG00000010761 10596 0.802 - - - - - - 0.802 - - - mitochondrial ribosomal protein L37 [Source:NCBI gene;Acc:772313]
48. MAP3K7 ENSGALG00000015596 15164 0.802 - - - - - - 0.802 - - - mitogen-activated protein kinase kinase kinase 7 [Source:HGNC Symbol;Acc:HGNC:6859]
49. DGCR2 ENSGALG00000005891 8405 0.802 - - - - - - 0.802 - - - DiGeorge syndrome critical region gene 2 [Source:HGNC Symbol;Acc:HGNC:2845]
50. RBM17 ENSGALG00000006332 12656 0.801 - - - - - - 0.801 - - - RNA binding motif protein 17 [Source:HGNC Symbol;Acc:HGNC:16944]
51. PCIF1 ENSGALG00000023547 867 0.799 - - - - - - - 0.799 - - PDX1 C-terminal inhibiting factor 1 [Source:HGNC Symbol;Acc:HGNC:16200]
52. SBDS ENSGALG00000027989 112 0.799 - - 0.799 - - - - - - - SBDS, ribosome maturation factor [Source:NCBI gene;Acc:417477]
53. MAU2 ENSGALG00000002969 10604 0.799 - - - - - - - 0.799 - - MAU2 sister chromatid cohesion factor [Source:HGNC Symbol;Acc:HGNC:29140]
54. MIA2 ENSGALG00000010189 1223 0.799 - - - - - - - 0.799 - - melanoma inhibitory activity 2, transcript variant X5
55. TMEM70 ENSGALG00000033568 10720 0.799 - - - - - - 0.799 - - - transmembrane protein 70 [Source:NCBI gene;Acc:420188]
56. CDH4 ENSGALG00000005102 3446 0.798 - - - - - - 0.798 - - - cadherin 4 [Source:NCBI gene;Acc:419222]
57. CBLL1 ENSGALG00000038981 6725 0.797 - - - - - - 0.797 - - - Cbl proto-oncogene like 1 [Source:NCBI gene;Acc:417701]
58. SAP30 ENSGALG00000036252 2032 0.797 - - - - - - - 0.797 - - Sin3A associated protein 30 [Source:HGNC Symbol;Acc:HGNC:10532]
59. SLC20A2 ENSGALG00000038336 1704 0.796 - - - - - - - 0.796 - - solute carrier family 20 member 2 [Source:NCBI gene;Acc:422493]
60. ESD ENSGALG00000016991 11289 0.796 - - - - - - 0.796 - - - esterase D [Source:NCBI gene;Acc:418856]
61. WDR43 ENSGALG00000032529 12235 0.795 - - - - - - 0.795 - - - WD repeat domain 43 [Source:NCBI gene;Acc:421295]
62. SETD9 ENSGALG00000014719 5081 0.795 - - - - - - 0.795 - - - SET domain containing 9, transcript variant X2
63. GINS1 ENSGALG00000008538 4786 0.794 - - - - - - - 0.794 - - GINS complex subunit 1 [Source:NCBI gene;Acc:425297]
64. ATG3 ENSGALG00000015204 11277 0.794 - - - - - - 0.794 - - - autophagy related 3 [Source:NCBI gene;Acc:418369]
65. API5 ENSGALG00000037968 18265 0.794 - - - - - - 0.794 - - - apoptosis inhibitor 5 [Source:NCBI gene;Acc:423168]
66. C15orf27 C15orf27 1206 0.794 - - - - - - 0.794 - - -
67. COBRA1 COBRA1 4600 0.794 - - - - - - 0.794 - - -
68. TPRKB ENSGALG00000013018 8687 0.793 - - - - - - 0.793 - - - TP53RK binding protein [Source:HGNC Symbol;Acc:HGNC:24259]
69. C1QBP ENSGALG00000001654 34814 0.793 - - - - - - 0.793 - - - complement C1q binding protein [Source:HGNC Symbol;Acc:HGNC:1243]
70. GATD3A ENSGALG00000016918 24760 0.792 - - - - - - 0.792 - - - glutamine amidotransferase like class 1 domain containing 3A [Source:NCBI gene;Acc:418811]
71. ILF2 ENSGALG00000011570 23050 0.791 - - - - - - 0.791 - - - interleukin enhancer binding factor 2 [Source:HGNC Symbol;Acc:HGNC:6037]
72. PARP1 ENSGALG00000009228 39433 0.791 - - - - - - 0.791 - - - poly (ADP-ribose) polymerase 1 [Source:NCBI gene;Acc:396199]
73. MTO1 ENSGALG00000015923 4418 0.791 - - - - - - 0.791 - - - mitochondrial tRNA translation optimization 1 [Source:NCBI gene;Acc:772297]
74. TMEM185A ENSGALG00000009139 4424 0.79 - - - - - - 0.790 - - - transmembrane protein 185A [Source:HGNC Symbol;Acc:HGNC:17125]
75. HERC2 ENSGALG00000016739 9900 0.79 - - - - - - 0.790 - - - HECT and RLD domain containing E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:418682]
76. ENSGALG00000012250 ENSGALG00000012250 581 0.789 - - 0.789 - - - - - - -
77. COMMD4 ENSGALG00000001572 31664 0.789 - - - - - - 0.789 - - - COMM domain containing 4 [Source:NCBI gene;Acc:770048]
78. IFT46 ENSGALG00000007438 4094 0.789 - - - - - - 0.789 - - - intraflagellar transport 46, transcript variant X1
79. BRP44 BRP44 17093 0.788 - - - - - - 0.788 - - -
80. RPF2 ENSGALG00000037087 12788 0.787 - - - - - - 0.787 - - - ribosome production factor 2 homolog [Source:HGNC Symbol;Acc:HGNC:20870]
81. PES1 ENSGALG00000007778 12248 0.787 - - - - - - 0.787 - - - pescadillo ribosomal biogenesis factor 1 [Source:HGNC Symbol;Acc:HGNC:8848]
82. CLCC1 ENSGALG00000002106 1662 0.785 - - - - - - 0.785 - - - chloride channel CLIC like 1 [Source:HGNC Symbol;Acc:HGNC:29675]
83. ATG5 ENSGALG00000015387 7752 0.785 - - - - - - 0.785 - - - autophagy related 5 [Source:NCBI gene;Acc:421784]
84. PHF20L1 ENSGALG00000033205 7598 0.785 - - - - - - 0.785 - - - PHD finger protein 20 like 1 [Source:NCBI gene;Acc:420323]
85. NAA20 ENSGALG00000012587 11349 0.785 - - - - - - 0.785 - - - N(alpha)-acetyltransferase 20, NatB catalytic subunit [Source:HGNC Symbol;Acc:HGNC:15908]
86. RABGGTB ENSGALG00000011388 11654 0.785 - - - - - - 0.785 - - - Rab geranylgeranyltransferase subunit beta [Source:HGNC Symbol;Acc:HGNC:9796]
87. WSB2 ENSGALG00000008151 13246 0.784 - - - - - - 0.784 - - - WD repeat and SOCS box containing 2 [Source:HGNC Symbol;Acc:HGNC:19222]
88. SNF8 ENSGALG00000001309 7398 0.781 - - - - - - 0.781 - - - SNF8, ESCRT-II complex subunit [Source:HGNC Symbol;Acc:HGNC:17028]
89. ANKRA2 ENSGALG00000013511 3460 0.781 - - - - - - 0.781 - - - ankyrin repeat family A member 2 [Source:NCBI gene;Acc:426153]
90. CLTCL1 ENSGALG00000041760 9351 0.781 - - - - - - 0.781 - - - clathrin, heavy chain-like 1, transcript variant X6
91. TOMM34 ENSGALG00000004110 119 0.781 - - 0.781 - - - - - - - translocase of outer mitochondrial membrane 34
92. PCTP ENSGALG00000003099 5851 0.781 - - - - - - 0.781 - - - phosphatidylcholine transfer protein [Source:HGNC Symbol;Acc:HGNC:8752]
93. NHP2L1 NHP2L1 12124 0.781 - - - - - - 0.781 - - -
94. SF3B3 ENSGALG00000002531 19397 0.781 - - - - - - 0.781 - - - splicing factor 3b subunit 3, transcript variant X2
95. KCNQ1 ENSGALG00000037138 179 0.78 - - 0.780 - - - - - - - potassium voltage-gated channel subfamily Q member 1 [Source:HGNC Symbol;Acc:HGNC:6294]
96. GTF2F2 ENSGALG00000016974 7524 0.78 - - - - - - 0.780 - - - general transcription factor IIF subunit 2 [Source:HGNC Symbol;Acc:HGNC:4653]
97. MRPL20 ENSGALG00000001542 28764 0.78 - - - - - - 0.780 - - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
98. RUVBL1 ENSGALG00000005931 9379 0.78 - - - - - - 0.780 - - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
99. SEC22A ENSGALG00000011697 7981 0.78 - - - - - - 0.780 - - - SEC22 homolog A, vesicle trafficking protein [Source:NCBI gene;Acc:424250]
100. SLC39A13 ENSGALG00000008122 2003 0.78 - - - - - - - 0.780 - - solute carrier family 39 member 13 [Source:NCBI gene;Acc:423183]

There are 487 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA