Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for CDK5RAP1

Gene Name Gene ID Reads Annotation
CDK5RAP1 ENSDARG00000044925, ENSDARG00000110547, ENSDARG00000112362 390 CDK5 regulatory subunit associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-070424-90]










Genes with expression patterns similar to CDK5RAP1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. CDK5RAP1 ENSDARG00000044925, ENSDARG00000110547, ENSDARG00000112362 390 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 CDK5 regulatory subunit associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-070424-90]
2. traip ENSDARG00000011262 410 1.837 - 0.904 - - - 0.933 - - - TRAF-interacting protein [Source:ZFIN;Acc:ZDB-GENE-040801-30]
3. ADCY3 ADCY3 537 1.716 - - - 0.861 - 0.855 - - -
4. wnt3 ENSDARG00000038990, ENSDARG00000111277 626 1.703 - 0.885 - - - 0.818 - - - wingless-type MMTV integration site family, member 3 [Source:ZFIN;Acc:ZDB-GENE-081003-1]
5. hcfc1a ENSDARG00000015990, ENSDARG00000111404 59 1.692 - 0.938 - - - 0.754 - - - host cell factor C1a [Source:ZFIN;Acc:ZDB-GENE-030912-10]
6. agpat9 agpat9 938 1.658 - 0.877 - - - - 0.781 - -
7. CU638738.1 CU638738.1 131 1.657 - 0.893 - - - 0.764 - - -
8. PEG3_40 PEG3_40 186 1.646 - 0.908 - - - 0.738 - - -
9. retsatl ENSDARG00000034989 41 1.645 - 0.908 - - - 0.737 - - - retinol saturase (all-trans-retinol 13,14-reductase) like [Source:ZFIN;Acc:ZDB-GENE-051113-252]
10. CABZ01051991.1 CABZ01051991.1 346 1.64 - - - 0.832 - 0.808 - - -
11. LDLRAD4 LDLRAD4 1237 1.637 - 0.874 - 0.763 - - - - -
12. rab23 ENSDARG00000004151 1077 1.618 - - - 0.875 - 0.743 - - - RAB23, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-050522-328]
13. morn3 ENSDARG00000021697, ENSDARG00000110843 93 1.617 - 0.863 - - - - 0.754 - - MORN repeat containing 3 [Source:ZFIN;Acc:ZDB-GENE-050417-152]
14. dhrs7 ENSDARG00000003444 812 1.616 - - - 0.756 - 0.860 - - - dehydrogenase/reductase (SDR family) member 7 [Source:ZFIN;Acc:ZDB-GENE-060825-21]
15. nfkb2 ENSDARG00000038687, ENSDARG00000112821 468 1.613 - 0.798 - - - 0.815 - - - nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) [Source:ZFIN;Acc:ZDB-GENE-030131-6701]
16. cldn11a ENSDARG00000020031 284 1.612 0.727 0.885 - - - - - - - claudin 11a [Source:ZFIN;Acc:ZDB-GENE-040718-369]
17. PARD3B PARD3B 401 1.612 - - - 0.847 - 0.765 - - -
18. CABZ01059408.1 ENSDARG00000116928 24 1.612 0.727 0.885 - - - - - - -
19. BACH1 BACH1 1021 1.611 - 0.876 - - - 0.735 - - -
20. slc20a1a ENSDARG00000020114, ENSDARG00000113616 503 1.604 - 0.873 - - - - 0.731 - - solute carrier family 20, member 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2217]
21. dio3b ENSDARG00000095767 521 1.6 - 0.812 - 0.788 - - - - - iodothyronine deiodinase 3b [Source:NCBI gene;Acc:798872]
22. dbpa ENSDARG00000063014 107 1.6 - 0.879 - - - 0.721 - - - D site albumin promoter binding protein a [Source:ZFIN;Acc:ZDB-GENE-060503-802]
23. si:dkey-264b2.3 19 1.598 - 0.879 - - - 0.719 - - - si:dkey-264b2.3, transcript variant X2
24. si:dkey-100n10.2 101 1.595 - - - 0.852 - 0.743 - - - si:dkey-100n10.2
25. si:ch211-59m15.1 87 1.594 - 0.737 - 0.857 - - - - - si:ch211-59m15.1
26. CT030046.1 CT030046.1 190 1.594 - 0.885 - - - 0.709 - - -
27. FOCAD ENSDARG00000022020 550 1.591 - 0.775 - 0.816 - - - - - focadhesin [Source:ZFIN;Acc:ZDB-GENE-080213-1]
28. crp4 714 1.59 - - - 0.801 - - - - 0.789 C-reactive protein 4
29. srfa ENSDARG00000053918 1773 1.587 0.870 0.717 - - - - - - - serum response factor a [Source:ZFIN;Acc:ZDB-GENE-990714-29]
30. larp7 ENSDARG00000017315 1194 1.577 - - - 0.738 - - 0.839 - - La ribonucleoprotein domain family, member 7 [Source:ZFIN;Acc:ZDB-GENE-030131-6896]
31. CABZ01073795.1 ENSDARG00000010729 52 1.576 - 0.748 - - - 0.828 - - - interferon-induced protein 44 [Source:NCBI gene;Acc:795887]
32. mta3 ENSDARG00000054903, ENSDARG00000113436 353 1.573 - - - - - 0.828 0.745 - - metastasis associated 1 family, member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6485]
33. SHISA9 SHISA9 154 1.571 - 0.732 - 0.839 - - - - -
34. mctp2a ENSDARG00000001414 307 1.571 - 0.726 - 0.845 - - - - - multiple C2 domains, transmembrane 2a [Source:ZFIN;Acc:ZDB-GENE-040724-63]
35. coq6 ENSDARG00000060380 176 1.571 - 0.855 - - - - 0.716 - - coenzyme Q6 monooxygenase [Source:ZFIN;Acc:ZDB-GENE-060825-297]
36. pigu ENSDARG00000075530 348 1.567 0.740 0.827 - - - - - - - phosphatidylinositol glycan anchor biosynthesis, class U [Source:ZFIN;Acc:ZDB-GENE-100629-1]
37. TTC17 ENSDARG00000044812 124 1.566 0.719 - - 0.847 - - - - - tetratricopeptide repeat domain 17 [Source:ZFIN;Acc:ZDB-GENE-100422-15]
38. TCF24 ENSDARG00000086944 518 1.565 - - - 0.760 - - 0.805 - - transcription factor 24 [Source:HGNC Symbol;Acc:HGNC:32275]
39. gng2_1 ENSDARG00000056831 113 1.565 - - - 0.844 - 0.721 - - - guanine nucleotide binding protein (G protein), gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050417-59]
40. ZCCHC2 ENSDARG00000067950 204 1.564 - - - 0.857 - 0.707 - - - zinc finger, CCHC domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070912-269]
41. phf10 ENSDARG00000070084 1210 1.563 - - - 0.854 - 0.709 - - - PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
42. GPN1 ENSDARG00000043928 566 1.563 - - - 0.839 - - 0.724 - - GPN-loop GTPase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-154]
43. sin3ab ENSDARG00000059812 2140 1.559 - - - 0.737 - 0.822 - - - SIN3 transcription regulator family member Ab [Source:ZFIN;Acc:ZDB-GENE-030131-2066]
44. atp6ap1a ENSDARG00000041417 898 1.554 - - - 0.815 - 0.739 - - - ATPase H+ transporting accessory protein 1a [Source:ZFIN;Acc:ZDB-GENE-090312-136]
45. acp6 ENSDARG00000040064 197 1.553 - 0.707 - 0.846 - - - - - acid phosphatase 6, lysophosphatidic [Source:ZFIN;Acc:ZDB-GENE-050208-290]
46. appb ENSDARG00000055543, ENSDARG00000109552 4461 1.548 - - - 0.846 - 0.702 - - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
47. C1H10orf12 C1H10orf12 1663 1.545 - - - 0.841 - 0.704 - - -
48. exosc10 ENSDARG00000037708, ENSDARG00000115953 1121 1.538 - - - 0.741 - - 0.797 - - exosome component 10 [Source:ZFIN;Acc:ZDB-GENE-040426-781]
49. efnb2b_1 ENSDARG00000074050 1094 1.533 - - - 0.708 - 0.825 - - - ephrin-B2b [Source:ZFIN;Acc:ZDB-GENE-010618-1]
50. CLIP3 ENSDARG00000054456 734 1.528 - - - 0.771 - 0.757 - - - CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
51. ints3 ENSDARG00000016811 339 1.528 - 0.816 - - - 0.712 - - - integrator complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-060503-634]
52. TESK1 TESK1 109 1.527 - - - - - 0.729 0.798 - -
53. rad54l ENSDARG00000018623 837 1.527 - 0.785 - - - - 0.742 - - RAD54 like [Source:ZFIN;Acc:ZDB-GENE-040426-968]
54. vps39 ENSDARG00000074471 684 1.523 - - - 0.797 - 0.726 - - - vacuolar protein sorting 39 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-080530-2]
55. ubp1 ENSDARG00000018000 1047 1.519 - - - - - 0.762 0.757 - - upstream binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-870]
56. si:ch211-262h13.3 ENSDARG00000070898 2094 1.518 0.801 - - - - 0.717 - - - si:ch211-262h13.3 [Source:ZFIN;Acc:ZDB-GENE-050208-532]
57. si:dkey-23a23.3 ENSDARG00000088214 86 1.516 0.797 - - - - 0.719 - - - si:dkey-23a23.3 [Source:ZFIN;Acc:ZDB-GENE-110913-89]
58. dnm3 dnm3 45 1.514 - - - - - 0.793 0.721 - -
59. KIF21A_1 KIF21A_1 237 1.511 - 0.743 - - - 0.768 - - -
60. LSM5 ENSDARG00000071573 371 1.506 - 0.787 - - - 0.719 - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-070822-23]
61. noc3l ENSDARG00000002487 230 1.504 - - - - - 0.773 0.731 - - NOC3-like DNA replication regulator [Source:ZFIN;Acc:ZDB-GENE-030131-9878]
62. pdcd10b ENSDARG00000012591 3395 1.499 - - - 0.751 - 0.748 - - - programmed cell death 10b [Source:ZFIN;Acc:ZDB-GENE-040426-2607]
63. ENSDARG00000023499 ENSDARG00000023499 395 1.495 - 0.707 - - - 0.788 - - -
64. CR388231.1 ENSDARG00000098710 153 1.495 - 0.763 - - - 0.732 - - -
65. gak ENSDARG00000090654 695 1.493 - - - 0.744 - 0.749 - - - cyclin G associated kinase [Source:ZFIN;Acc:ZDB-GENE-041210-358]
66. naif1 ENSDARG00000062753 176 1.491 - 0.785 - - - 0.706 - - - nuclear apoptosis inducing factor 1 [Source:ZFIN;Acc:ZDB-GENE-081104-236]
67. BX323449.2 BX323449.2 50 1.49 - - - - - 0.762 - - 0.728
68. unc119b ENSDARG00000044362 1528 1.489 - - - 0.745 - 0.744 - - - unc-119 homolog b (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-050201-2]
69. CABZ01038514.1 CABZ01038514.1 724 1.487 - - - 0.731 - 0.756 - - -
70. EML6 250 1.48 - 0.769 - - - 0.711 - - - echinoderm microtubule associated protein like 6
71. nup210 ENSDARG00000063333 995 1.478 - - - 0.704 - 0.774 - - - nucleoporin 210 [Source:ZFIN;Acc:ZDB-GENE-050208-132]
72. si:ch211-282j22.3 ENSDARG00000010524 1007 1.473 - - - 0.715 - 0.758 - - - si:ch211-282j22.3 [Source:ZFIN;Acc:ZDB-GENE-091113-49]
73. si:dkey-270b7.1 si:dkey-270b7.1 83 1.469 - 0.758 - - - 0.711 - - -
74. lzic ENSDARG00000055899 638 1.468 - 0.739 - 0.729 - - - - - leucine zipper and CTNNBIP1 domain containing [Source:ZFIN;Acc:ZDB-GENE-040718-342]
75. CR855306.1 ENSDARG00000099475 102 1.467 0.727 - - - - 0.740 - - -
76. atoh1b ENSDARG00000099564 494 1.465 0.727 - - - - 0.738 - - - atonal bHLH transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-041201-1]
77. RBM12B_1 RBM12B_1 1192 1.463 - 0.744 - - - 0.719 - - -
78. creb3l2 ENSDARG00000063563 1284 1.455 - 0.733 - - - 0.722 - - - cAMP responsive element binding protein 3-like 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1542]
79. nrp1b ENSDARG00000027290 170 1.455 - - - - - 0.728 0.727 - - neuropilin 1b [Source:ZFIN;Acc:ZDB-GENE-040611-1]
80. fabp11a_1 ENSDARG00000017299 387 1.454 - 0.741 - - - 0.713 - - - fatty acid binding protein 11a [Source:ZFIN;Acc:ZDB-GENE-040912-132]
81. dcdc2b ENSDARG00000053744 181 1.43 - - - - - 0.722 0.708 - - doublecortin domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-051113-124]
82. plk2b ENSDARG00000019130, ENSDARG00000111402 328 1.429 - 0.700 - - - 0.729 - - - polo-like kinase 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070720-17]
83. klhl8 ENSDARG00000101270 1305 1.426 - - - 0.722 - 0.704 - - - kelch-like family member 8 [Source:ZFIN;Acc:ZDB-GENE-070209-226]
84. GPR156 ENSDARG00000086215 126 1.42 0.716 - - - - - 0.704 - - G protein-coupled receptor 156 [Source:ZFIN;Acc:ZDB-GENE-060201-2]
85. wu:fc17b08 ENSDARG00000094249 427 1.419 - - - - - - 0.701 - 0.718 wu:fc17b08 [Source:ZFIN;Acc:ZDB-GENE-030131-2746]
86. timm8a ENSDARG00000023672, ENSDARG00000114203 1075 1.418 - 0.707 - - - - 0.711 - - translocase of inner mitochondrial membrane 8 homolog A (yeast) [Source:ZFIN;Acc:ZDB-GENE-040801-158]
87. col4a1 ENSDARG00000055009 3083 1.405 - - - - - 0.701 0.704 - - collagen, type IV, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-081105-114]
88. ARMC6 ENSDARG00000103770 39 0.97 - 0.970 - - - - - - - armadillo repeat containing 6 [Source:HGNC Symbol;Acc:HGNC:25049]
89. CNTLN ENSDARG00000033345 128 0.961 - 0.961 - - - - - - - centlein, centrosomal protein [Source:ZFIN;Acc:ZDB-GENE-090313-409]
90. asap3 ENSDARG00000021896 19 0.955 - 0.955 - - - - - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 [Source:ZFIN;Acc:ZDB-GENE-050913-39]
91. prmt7 ENSDARG00000051902, ENSDARG00000113277, ENSDARG00000116251 440 0.94 - - - - - 0.940 - - - protein arginine methyltransferase 7 [Source:ZFIN;Acc:ZDB-GENE-040426-1560]
92. SLC5A8 ENSDARG00000087120 60 0.936 - 0.936 - - - - - - - solute carrier family 5 (sodium/monocarboxylate cotransporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-141211-63]
93. dcaf12 ENSDARG00000063155 697 0.934 - - - 0.934 - - - - - DDB1 and CUL4 associated factor 12 [Source:ZFIN;Acc:ZDB-GENE-061013-363]
94. hcfc2 ENSDARG00000058127 490 0.933 - - - 0.933 - - - - - host cell factor C2 [Source:ZFIN;Acc:ZDB-GENE-050417-203]
95. gadd45aa ENSDARG00000043581 114 0.933 - 0.933 - - - - - - - growth arrest and DNA-damage-inducible, alpha, a [Source:ZFIN;Acc:ZDB-GENE-040426-1501]
96. egr3 ENSDARG00000089156 71 0.932 - 0.932 - - - - - - - early growth response 3 [Source:ZFIN;Acc:ZDB-GENE-040718-394]
97. msmo1 ENSDARG00000055876, ENSDARG00000110767, ENSDARG00000115922 195 0.932 - 0.932 - - - - - - - methylsterol monooxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2670]
98. CU929225.1 CU929225.1 104 0.932 - 0.932 - - - - - - -
99. eed ENSDARG00000099640 143 0.929 - 0.929 - - - - - - - embryonic ectoderm development [Source:ZFIN;Acc:ZDB-GENE-050417-287]
100. zgc:136908 ENSDARG00000011983 97 0.929 - - - - - - 0.929 - - zgc:136908 [Source:ZFIN;Acc:ZDB-GENE-060312-22]

There are 1739 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA