Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CDK12

Gene Name Gene ID Reads Annotation
CDK12 ENSGALG00000001731 39 cyclin dependent kinase 12 [Source:HGNC Symbol;Acc:HGNC:24224]











Genes with expression patterns similar to CDK12

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CDK12 ENSGALG00000001731 39 5 - - 1.000 1.000 1.000 1.000 - - - 1.000 cyclin dependent kinase 12 [Source:HGNC Symbol;Acc:HGNC:24224]
2. ENSGALG00000022715 ENSGALG00000022715 13 1.655 - - - 0.816 0.839 - - - - -
3. ENSGALG00000012332 ENSGALG00000012332 71 0.915 - - - - 0.915 - - - - -
4. CNIH3 ENSGALG00000009308 2 0.915 - - - - 0.915 - - - - - cornichon family AMPA receptor auxiliary protein 3 [Source:HGNC Symbol;Acc:HGNC:26802]
5. COMMD6 ENSGALG00000016922 24 0.915 - - - - 0.915 - - - - - COMM domain containing 6 [Source:HGNC Symbol;Acc:HGNC:24015]
6. MAPK11 ENSGALG00000040023 15 0.915 - - - - 0.915 - - - - - mitogen-activated protein kinase 11 [Source:NCBI gene;Acc:417739]
7. ANKMY1 ENSGALG00000033920 12 0.915 - - - - 0.915 - - - - - ankyrin repeat and MYND domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20987]
8. MAPK10 ENSGALG00000011109 16 0.915 - - - - 0.915 - - - - - Gallus gallus mitogen-activated protein kinase 10 (MAPK10), transcript variant 1, mRNA. [Source:RefSeq mRNA;Acc:NM_001318224]
9. LRRTM3 ENSGALG00000002864 29 0.915 - - - - 0.915 - - - - - leucine rich repeat transmembrane neuronal 3 [Source:NCBI gene;Acc:423649]
10. GLTSCR1L 18 0.915 - - - - 0.915 - - - - - GLTSCR1 like, transcript variant X4
11. DGKI ENSGALG00000012890 3 0.915 - - - - 0.915 - - - - - diacylglycerol kinase iota [Source:HGNC Symbol;Acc:HGNC:2855]
12. ENSGALG00000007003 ENSGALG00000007003 2 0.915 - - - - 0.915 - - - - -
13. ERC2 ENSGALG00000005419 24 0.915 - - - - 0.915 - - - - - ELKS/RAB6-interacting/CAST family member 2 [Source:HGNC Symbol;Acc:HGNC:31922]
14. TNIP2 ENSGALG00000015666 28 0.915 - - - - 0.915 - - - - - TNFAIP3 interacting protein 2 [Source:NCBI gene;Acc:422884]
15. CRB2 ENSGALG00000001169 23 0.883 - - - - 0.883 - - - - - crumbs 2, cell polarity complex component [Source:HGNC Symbol;Acc:HGNC:18688]
16. IRX6 ENSGALG00000023738 2 0.876 - - - 0.876 - - - - - - iroquois homeobox 6 [Source:HGNC Symbol;Acc:HGNC:14675]
17. ENSGALG00000018431 ENSGALG00000018431 2 0.876 - - - 0.876 - - - - - -
18. ENSGALG00000028038 ENSGALG00000028038 9 0.876 - - - 0.876 - - - - - -
19. ENSGALG00000021026 ENSGALG00000021026 2 0.876 - - - 0.876 - - - - - -
20. HOXD8 ENSGALG00000037272 4338 0.876 - - - 0.876 - - - - - - homeobox D8 [Source:NCBI gene;Acc:396301]
21. CTSD ENSGALG00000006613 4 0.876 - - - 0.876 - - - - - - cathepsin D [Source:NCBI gene;Acc:396090]
22. gga-mir-218-1 ENSGALG00000018327 3 0.876 - - - 0.876 - - - - - - gga-mir-218-1 [Source:miRBase;Acc:MI0001212]
23. ENSGALG00000013079 ENSGALG00000013079 12 0.876 - - - 0.876 - - - - - -
24. RGS10 ENSGALG00000009422 10 0.876 - - - 0.876 - - - - - - regulator of G protein signaling 10 [Source:HGNC Symbol;Acc:HGNC:9992]
25. AVDL ENSGALG00000021848 1 0.876 - - - 0.876 - - - - - - avidin-like, transcript variant X2
26. XKRX ENSGALG00000006637 13 0.876 - - - 0.876 - - - - - - XK related, X-linked, transcript variant X4
27. ENSGALG00000026721 ENSGALG00000026721 1 0.876 - - - 0.876 - - - - - -
28. TP53TG5 ENSGALG00000021357 1 0.876 - - - 0.876 - - - - - - TP53 target 5, transcript variant X9
29. CASZ1 ENSGALG00000002888 2 0.872 - - - - - - - - - 0.872 castor zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:26002]
30. gga-let-7d ENSGALG00000018264 1 0.872 - - - - - - - - - 0.872 gga-let-7d [Source:miRBase;Acc:MI0001232]
31. ENSGALG00000004635 ENSGALG00000004635 2 0.872 - - - - - - - - - 0.872
32. ENSGALG00000018376 ENSGALG00000018376 11 0.872 - - - - - - - - - 0.872
33. CITED2 ENSGALG00000013818 4 0.872 - - - - - - - - - 0.872 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 [Source:NCBI gene;Acc:395399]
34. KPNA7 ENSGALG00000004665 1 0.872 - - - - - - - - - 0.872 karyopherin subunit alpha 7 [Source:HGNC Symbol;Acc:HGNC:21839]
35. TEX14 ENSGALG00000005037 3 0.872 - - - - - - - - - 0.872 testis expressed 14, intercellular bridge forming factor [Source:HGNC Symbol;Acc:HGNC:11737]
36. SLC18A2 ENSGALG00000009289 11 0.872 - - - - - - - - - 0.872 solute carrier family 18 member A2 [Source:HGNC Symbol;Acc:HGNC:10935]
37. ENSGALG00000007135 ENSGALG00000007135 3 0.872 - - - - - - - - - 0.872
38. AIRE AIRE 3 0.872 - - - - - - - - - 0.872
39. ENSGALG00000002290 ENSGALG00000002290 6 0.872 - - - - - - - - - 0.872
40. GRIN2A ENSGALG00000007278 17 0.872 - - - - - - - - - 0.872 glutamate ionotropic receptor NMDA type subunit 2A [Source:HGNC Symbol;Acc:HGNC:4585]
41. SMAD9 ENSGALG00000017050 11 0.872 - - - - - - - - - 0.872 SMAD family member 9 [Source:NCBI gene;Acc:395543]
42. ENSGALG00000009041 ENSGALG00000009041 27 0.872 - - - - - - - - - 0.872
43. FAM71D ENSGALG00000043908 2 0.872 - - - - - - - - - 0.872 family with sequence similarity 71, member D
44. SNORD65 SNORD65 3 0.872 - - - - - - - - - 0.872
45. PRUNE2 ENSGALG00000015167 37 0.872 - - - - - - - - - 0.872 prune homolog 2, transcript variant X5
46. CECR5 3 0.872 - - - - - - - - - 0.872 cat eye syndrome chromosome region, candidate 5, transcript variant X2
47. OGFR ENSGALG00000005609 3 0.872 - - - - - - - - - 0.872 opioid growth factor receptor [Source:HGNC Symbol;Acc:HGNC:15768]
48. CEP57L1 ENSGALG00000015283 22 0.872 - - - - - - - - - 0.872 centrosomal protein 57 like 1 [Source:HGNC Symbol;Acc:HGNC:21561]
49. HMGCS2 ENSGALG00000002960 54 0.872 - - - - - - - - - 0.872 3-hydroxy-3-methylglutaryl-CoA synthase 2 [Source:HGNC Symbol;Acc:HGNC:5008]
50. DBH ENSGALG00000040045 6 0.872 - - - - - - - - - 0.872 dopamine beta-hydroxylase [Source:HGNC Symbol;Acc:HGNC:2689]
51. ACOT11 ENSGALG00000010785 4 0.872 - - - - - - - - - 0.872 acyl-CoA thioesterase 11 [Source:HGNC Symbol;Acc:HGNC:18156]
52. ENSGALG00000027945 ENSGALG00000027945 2 0.872 - - - - - - - - - 0.872
53. CDH6 ENSGALG00000012917 17 0.871 - - - 0.871 - - - - - - cadherin 6 [Source:NCBI gene;Acc:414842]
54. ENSGALG00000026592 ENSGALG00000026592 4331 0.866 - - - - - - - - - 0.866
55. ARMC3 ENSGALG00000007864 6 0.864 - - - - - - - - - 0.864 armadillo repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:30964]
56. SH3RF1 ENSGALG00000009692 46 0.86 - - - - 0.860 - - - - - SH3 domain containing ring finger 1 [Source:HGNC Symbol;Acc:HGNC:17650]
57. KCNE3 ENSGALG00000022696 561 0.855 - - - 0.855 - - - - - - potassium voltage-gated channel subfamily E regulatory subunit 3 [Source:HGNC Symbol;Acc:HGNC:6243]
58. HOXB9 ENSGALG00000001276 55 0.853 - - - - - - - - - 0.853 homeobox B9 [Source:HGNC Symbol;Acc:HGNC:5120]
59. PDE8A ENSGALG00000005992 10 0.851 - - - - - - - - - 0.851 phosphodiesterase 8A [Source:HGNC Symbol;Acc:HGNC:8793]
60. TBX2 ENSGALG00000034297 57 0.846 - - - 0.846 - - - - - - T-box 2 [Source:HGNC Symbol;Acc:HGNC:11597]
61. ENSGALG00000007420 ENSGALG00000007420 7 0.845 - - - 0.845 - - - - - -
62. PTHRP PTHRP 8 0.843 - - - - 0.843 - - - - -
63. GRIP1 ENSGALG00000009895 24 0.836 - - - - 0.836 - - - - - glutamate receptor interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:18708]
64. SAMD10 ENSGALG00000006007 15 0.836 - - - - 0.836 - - - - - sterile alpha motif domain containing 10 [Source:HGNC Symbol;Acc:HGNC:16129]
65. MYO18B ENSGALG00000045218 7 0.832 - - - - 0.832 - - - - - myosin XVIIIB [Source:HGNC Symbol;Acc:HGNC:18150]
66. CHRNB3 ENSGALG00000015384 9 0.832 - - - - 0.832 - - - - - cholinergic receptor nicotinic beta 3 subunit [Source:NCBI gene;Acc:395604]
67. CDK6 ENSGALG00000009476 17 0.829 - - - - 0.829 - - - - - cyclin dependent kinase 6 [Source:NCBI gene;Acc:420558]
68. NOV ENSGALG00000038364 190 0.828 - - - - - - - - - 0.828 nephroblastoma overexpressed [Source:NCBI gene;Acc:396204]
69. CL2 ENSGALG00000011455 87 0.821 - - - - - - - - - 0.821 liver ribonuclease A [Source:NCBI gene;Acc:422633]
70. RASSF6 ENSGALG00000011664 7 0.821 - - - - - - - - - 0.821 Ras association domain family member 6 [Source:HGNC Symbol;Acc:HGNC:20796]
71. U6 U6 3 0.82 - - - - - - - - - 0.820
72. JDP2 ENSGALG00000010322 11 0.815 - - - 0.815 - - - - - - Jun dimerization protein 2 [Source:NCBI gene;Acc:423363]
73. GHSR ENSGALG00000027947 24 0.811 - - - - - - - - - 0.811 growth hormone secretagogue receptor [Source:NCBI gene;Acc:378911]
74. ENSGALG00000019667 ENSGALG00000019667 16 0.811 - - - - - - - - - 0.811
75. PLA2G10L ENSGALG00000019233 11 0.804 - - - 0.804 - - - - - - phospholipase A2 group X-like, transcript variant X2
76. MSANTD1 ENSGALG00000015628 154 0.802 - - - - - - - - - 0.802 Myb/SANT DNA binding domain containing 1 [Source:HGNC Symbol;Acc:HGNC:33741]
77. TTC25 ENSGALG00000003464 70 0.795 - - - - 0.795 - - - - - tetratricopeptide repeat domain 25
78. GAL ENSGALG00000007047 606 0.791 - - - - - - - - - 0.791 galanin and GMAP prepropeptide [Source:NCBI gene;Acc:423117]
79. CRYBA4 ENSGALG00000005634 56 0.781 - - - - - - - - - 0.781 crystallin beta A4 [Source:NCBI gene;Acc:373998]
80. C1R ENSGALG00000014659 9 0.78 - - - - - - - - - 0.780 complement C1r [Source:HGNC Symbol;Acc:HGNC:1246]
81. SLC8B1 ENSGALG00000008337 42 0.78 - - - - 0.780 - - - - - solute carrier family 8 member B1 [Source:HGNC Symbol;Acc:HGNC:26175]
82. RNF19A ENSGALG00000038772 380 0.78 - - - - - - - - - 0.780 ring finger protein 19A, RBR E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:13432]
83. VPS72 ENSGALG00000000793 329 0.778 - - - 0.778 - - - - - - vacuolar protein sorting 72 homolog [Source:HGNC Symbol;Acc:HGNC:11644]
84. CHRM3 6 0.775 - - - 0.775 - - - - - - cholinergic receptor muscarinic 3
85. FAM20C ENSGALG00000038768 31 0.768 - - 0.768 - - - - - - - FAM20C, golgi associated secretory pathway kinase [Source:HGNC Symbol;Acc:HGNC:22140]
86. ENSGALG00000003817 ENSGALG00000003817 45 0.766 - - - - 0.766 - - - - -
87. KCNQ3 ENSGALG00000037626 6 0.763 - - - 0.763 - - - - - - potassium voltage-gated channel subfamily Q member 3 [Source:HGNC Symbol;Acc:HGNC:6297]
88. MUC5B MUC5B 62 0.757 - - - 0.757 - - - - - -
89. SEMA6B ENSGALG00000001171 73 0.755 - - - - - - - - - 0.755 Gallus gallus semaphorin 6B (SEMA6B), mRNA. [Source:RefSeq mRNA;Acc:NM_001319026]
90. WDR41 ENSGALG00000004350 16 0.752 - - - 0.752 - - - - - - WD repeat domain 41 [Source:HGNC Symbol;Acc:HGNC:25601]
91. RFLB RFLB 140 0.751 - - - 0.751 - - - - - -
92. PAX2 ENSGALG00000005689 351 0.751 - - - 0.751 - - - - - - paired box 2 [Source:NCBI gene;Acc:395574]
93. GAREML GAREML 8 0.748 - - - - 0.748 - - - - -
94. TRIM41 ENSGALG00000030569 5 0.747 - - - - - - - - - 0.747 tripartite motif containing 41 [Source:NCBI gene;Acc:417043]
95. DLX3 ENSGALG00000040529 37 0.744 - - - 0.744 - - - - - - Gallus gallus distal-less homeobox 3 (DLX3), mRNA. [Source:RefSeq mRNA;Acc:NM_204804]
96. CD3D ENSGALG00000007418 314 0.743 - - - - - - - - - 0.743 CD3d molecule [Source:NCBI gene;Acc:396518]
97. PWWP2B ENSGALG00000010491 30 0.741 - - - - - - - - - 0.741 PWWP domain containing 2B [Source:HGNC Symbol;Acc:HGNC:25150]
98. VPS37A ENSGALG00000013646 55 0.741 - - - - 0.741 - - - - - VPS37A, ESCRT-I subunit [Source:HGNC Symbol;Acc:HGNC:24928]
99. GGH ENSGALG00000031130 40 0.74 - - - - 0.740 - - - - - gamma-glutamyl hydrolase [Source:HGNC Symbol;Acc:HGNC:4248]
100. ZNFX1 ENSGALG00000004859 33 0.74 - - - - - - - - - 0.740 zinc finger NFX1-type containing 1 [Source:HGNC Symbol;Acc:HGNC:29271]

There are 20 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA