Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for CDIP1

Gene Name Gene ID Reads Annotation
CDIP1 ENSDARG00000076118 1294 cell death-inducing p53 target 1 [Source:ZFIN;Acc:ZDB-GENE-070720-18]










Genes with expression patterns similar to CDIP1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. CDIP1 ENSDARG00000076118 1294 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cell death-inducing p53 target 1 [Source:ZFIN;Acc:ZDB-GENE-070720-18]
2. mrps18b ENSDARG00000007065 2121 2.506 - - - - - - 0.709 0.874 0.923 mitochondrial ribosomal protein S18B [Source:ZFIN;Acc:ZDB-GENE-050417-278]
3. nxf1 ENSDARG00000055076 3251 2.454 0.997 - - - - 0.722 0.735 - - nuclear RNA export factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2585]
4. hoxc8a ENSDARG00000070346 4252 2.349 - - - - - 0.760 0.818 0.771 - homeobox C8a [Source:ZFIN;Acc:ZDB-GENE-990415-114]
5. syncripl ENSDARG00000026723 3889 2.316 - - - - - - 0.703 0.819 0.794 synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
6. umps ENSDARG00000012215 4564 1.896 0.926 - - - - - - - 0.970 uridine monophosphate synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-785]
7. pon2 ENSDARG00000016856 1382 1.86 0.998 - - - - - - 0.862 - paraoxonase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7116]
8. necap2 ENSDARG00000046002 4372 1.858 0.989 - - - - - - 0.869 - NECAP endocytosis associated 2 [Source:ZFIN;Acc:ZDB-GENE-050522-67]
9. srpr 5148 1.854 0.961 - - - - - - - 0.893 signal recognition particle receptor (docking protein)
10. FRMPD3 ENSDARG00000074865, ENSDARG00000109705 276 1.834 - - - - - - - 0.894 0.940 FERM and PDZ domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100316-9]
11. nckap5l ENSDARG00000079148 4227 1.816 0.995 - - - - 0.821 - - - NCK-associated protein 5-like [Source:ZFIN;Acc:ZDB-GENE-090313-304]
12. SNAP91 ENSDARG00000098809 556 1.809 - - - - - 0.835 - - 0.974 synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
13. gse1 ENSDARG00000062020 2337 1.772 0.990 - - - - - - - 0.782 Gse1 coiled-coil protein [Source:ZFIN;Acc:ZDB-GENE-030131-9569]
14. srsf6a ENSDARG00000013729 8576 1.768 0.976 - - - - - 0.792 - - serine/arginine-rich splicing factor 6a [Source:ZFIN;Acc:ZDB-GENE-040426-2824]
15. sf3b2 ENSDARG00000018049 4675 1.766 0.882 - - - - - - 0.884 - splicing factor 3b, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-070928-1]
16. nrxn3b ENSDARG00000062693 192 1.761 - - - - - 0.794 - - 0.967 neurexin 3b [Source:ZFIN;Acc:ZDB-GENE-070206-10]
17. farsb ENSDARG00000016864 6776 1.758 0.977 - - - - - 0.781 - - phenylalanyl-tRNA synthetase subunit beta [Source:ZFIN;Acc:ZDB-GENE-021206-2]
18. rpl10 ENSDARG00000025581, ENSDARG00000115128, ENSDARG00000117015 6574 1.745 0.988 - - - - - - - 0.757 ribosomal protein L10 [Source:ZFIN;Acc:ZDB-GENE-030131-8656]
19. hmgcrb ENSDARG00000105206 2080 1.729 0.999 - - - - - 0.730 - - 3-hydroxy-3-methylglutaryl-CoA reductase b [Source:ZFIN;Acc:ZDB-GENE-051108-1]
20. zfand5b ENSDARG00000002271 4145 1.725 0.998 - - - - 0.727 - - - zinc finger, AN1-type domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-875]
21. RLIM ENSDARG00000079306 514 1.725 - - - - - - 0.766 - 0.959 ring finger protein, LIM domain interacting [Source:ZFIN;Acc:ZDB-GENE-120809-2]
22. atp5j 4272 1.721 0.987 - - - - - - 0.734 - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6, transcript variant X2
23. tmeff1b ENSDARG00000056740 11253 1.721 0.992 - - - - 0.729 - - - transmembrane protein with EGF-like and two follistatin-like domains 1b [Source:ZFIN;Acc:ZDB-GENE-050706-143]
24. hs2st1a ENSDARG00000099478 864 1.719 - - - - - - 0.835 0.884 - heparan sulfate 2-O-sulfotransferase 1a [Source:ZFIN;Acc:ZDB-GENE-070112-2312]
25. polr2c ENSDARG00000033596, ENSDARG00000111144, ENSDARG00000113715 1388 1.719 - - - - - - 0.823 - 0.896 polymerase (RNA) II (DNA directed) polypeptide C [Source:ZFIN;Acc:ZDB-GENE-030131-6609]
26. st13 ENSDARG00000021973 7787 1.718 0.983 - - - - - - 0.735 - ST13, Hsp70 interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-5395]
27. tex10 ENSDARG00000055885 1229 1.716 - 0.779 - - - - - - 0.937 testis expressed 10 [Source:ZFIN;Acc:ZDB-GENE-040426-2827]
28. supt6h ENSDARG00000006524 3221 1.716 0.995 - - - - - - - 0.721 SPT6 homolog, histone chaperone [Source:ZFIN;Acc:ZDB-GENE-030131-7949]
29. rbm34 ENSDARG00000101877 1573 1.714 - - - - - - 0.759 - 0.955 RNA binding motif protein 34 [Source:ZFIN;Acc:ZDB-GENE-040718-77]
30. TNPO2 ENSDARG00000042887 2290 1.71 - - - - - - - 0.902 0.808 transportin 2 [Source:HGNC Symbol;Acc:HGNC:19998]
31. sf3b4 ENSDARG00000018574 7470 1.71 0.999 0.711 - - - - - - - splicing factor 3b, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-020419-22]
32. uqcrc2a ENSDARG00000014794 3949 1.707 0.989 - - - - - 0.718 - - ubiquinol-cytochrome c reductase core protein 2a [Source:ZFIN;Acc:ZDB-GENE-040718-405]
33. eya3 ENSDARG00000036100 1965 1.701 - - - - - - 0.790 - 0.911 EYA transcriptional coactivator and phosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-864]
34. naa15a ENSDARG00000003213 5889 1.701 0.991 - - - - - 0.710 - - N(alpha)-acetyltransferase 15, NatA auxiliary subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-2392]
35. hspe1 ENSDARG00000056167 21636 1.682 0.951 - - - - - - - 0.731 heat shock 10 protein 1 [Source:ZFIN;Acc:ZDB-GENE-000906-2]
36. rab39b rab39b 449 1.681 - - - - - 0.751 - - 0.930
37. nrp1a ENSDARG00000102153 4154 1.676 0.967 - - - - - - - 0.709 neuropilin 1a [Source:ZFIN;Acc:ZDB-GENE-030519-2]
38. gmpr ENSDARG00000016160 1537 1.672 - - - - - - 0.749 0.923 - guanosine monophosphate reductase [Source:ZFIN;Acc:ZDB-GENE-050522-48]
39. rusc1 ENSDARG00000078125 617 1.67 - - - - - 0.749 - - 0.921 RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]
40. puf60a ENSDARG00000032175 5618 1.669 - - - - - - 0.789 0.880 - poly-U binding splicing factor a [Source:ZFIN;Acc:ZDB-GENE-030131-2891]
41. dopey1 438 1.666 - - - - - 0.703 - - 0.963 dopey family member 1, transcript variant X4
42. mars ENSDARG00000034396 3618 1.658 - 0.826 - - - - - - 0.832 methionyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030219-83]
43. COMP 2018 1.654 - - - - - - 0.704 0.950 - cartilage oligomeric matrix protein, transcript variant X1
44. ube2a ENSDARG00000098466 12765 1.652 0.877 - - - - - 0.775 - - ubiquitin-conjugating enzyme E2A (RAD6 homolog) [Source:ZFIN;Acc:ZDB-GENE-030616-72]
45. cox6c ENSDARG00000038577 16845 1.646 0.915 - - - - - 0.731 - - cytochrome c oxidase subunit 6C [Source:ZFIN;Acc:ZDB-GENE-040724-95]
46. egln1 egln1 3746 1.643 - - - - - - 0.780 0.863 -
47. rbm42 ENSDARG00000039910 1111 1.643 - 0.732 - - - - - - 0.911 RNA binding motif protein 42 [Source:ZFIN;Acc:ZDB-GENE-040809-2]
48. hspb8 ENSDARG00000058365, ENSDARG00000109236 8688 1.638 0.921 - - - - - 0.717 - - heat shock protein b8 [Source:ZFIN;Acc:ZDB-GENE-030131-2480]
49. arglu1a ENSDARG00000019223 8716 1.637 0.881 - - - - 0.756 - - - arginine and glutamate rich 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2914]
50. eif2s2 ENSDARG00000053047 15904 1.637 0.859 - - - - - 0.778 - - eukaryotic translation initiation factor 2, subunit 2 beta [Source:ZFIN;Acc:ZDB-GENE-030131-3085]
51. snap25a ENSDARG00000020609 4537 1.633 - - - - - 0.827 - 0.806 - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
52. ppt2 ENSDARG00000104542 888 1.628 - - - - - - 0.737 - 0.891 palmitoyl-protein thioesterase 2 [Source:ZFIN;Acc:ZDB-GENE-010430-4]
53. calb1 ENSDARG00000031598 252 1.623 - - 0.785 - - 0.838 - - - calbindin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8107]
54. rbfox3 rbfox3 1443 1.622 - - - - - 0.793 - - 0.829
55. ube2d2l ENSDARG00000099749 1462 1.618 - - - - - - 0.725 - 0.893 ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast), like [Source:ZFIN;Acc:ZDB-GENE-030131-7384]
56. metap2b_1 ENSDARG00000102571 5507 1.613 0.837 - - - - - 0.776 - - methionyl aminopeptidase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2172]
57. PARL 2511 1.61 - 0.719 - - - - - - 0.891 presenilin associated rhomboid like
58. tmem65 ENSDARG00000076393 1646 1.61 - - - - - - 0.789 0.821 - transmembrane protein 65 [Source:ZFIN;Acc:ZDB-GENE-081022-99]
59. nploc4 ENSDARG00000100487 1262 1.608 - - - - - - 0.709 - 0.899 NPL4 homolog, ubiquitin recognition factor [Source:ZFIN;Acc:ZDB-GENE-030131-5658]
60. marcksb ENSDARG00000008803 42949 1.604 0.896 - - - - 0.708 - - - myristoylated alanine-rich protein kinase C substrate b [Source:ZFIN;Acc:ZDB-GENE-030131-1921]
61. eps15l1a ENSDARG00000042670 1565 1.602 - - - - - - 0.753 - 0.849 epidermal growth factor receptor pathway substrate 15-like 1a [Source:ZFIN;Acc:ZDB-GENE-060503-274]
62. ywhag2 ENSDARG00000071658, ENSDARG00000116741 3326 1.6 - - - - - 0.822 0.778 - - 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061023-2]
63. serbp1a_1 ENSDARG00000074242 13588 1.599 0.880 - - - - - 0.719 - - SERPINE1 mRNA binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7389]
64. E2F3 ENSDARG00000070463 799 1.595 - - - - - 0.711 - 0.884 - E2F transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-070112-882]
65. lfng ENSDARG00000037879 11783 1.595 - - - - - 0.728 - 0.867 - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-980605-16]
66. cwc25 ENSDARG00000003382 2134 1.595 - 0.715 - - - - - - 0.880 CWC25 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2817]
67. rhoj ENSDARG00000020250 1522 1.593 - - - - - - 0.702 - 0.891 ras homolog family member J [Source:ZFIN;Acc:ZDB-GENE-040724-272]
68. arhgap12b ENSDARG00000026482, ENSDARG00000109973 1142 1.59 - - - - - - 0.726 0.864 - Rho GTPase activating protein 12b [Source:ZFIN;Acc:ZDB-GENE-040426-1727]
69. sbds ENSDARG00000027803 846 1.587 - 0.702 - - - - - 0.885 - SBDS, ribosome maturation factor [Source:ZFIN;Acc:ZDB-GENE-040426-1116]
70. eno2 ENSDARG00000014287 2162 1.58 - - - - - 0.709 - 0.871 - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
71. neo1 neo1 4056 1.579 - 0.730 - - - - - 0.849 -
72. hypk ENSDARG00000059725 20584 1.576 0.847 - - - - - 0.729 - - huntingtin interacting protein K [Source:ZFIN;Acc:ZDB-GENE-080515-6]
73. synpo2lb ENSDARG00000078696 2361 1.569 - - - - - - 0.718 0.851 - synaptopodin 2-like b [Source:ZFIN;Acc:ZDB-GENE-090828-5]
74. scaf4a ENSDARG00000077093 2408 1.567 - 0.704 - - - - - 0.863 - SR-related CTD-associated factor 4a [Source:ZFIN;Acc:ZDB-GENE-030131-9003]
75. hoxb8b ENSDARG00000054025, ENSDARG00000111056 2106 1.567 - - - - - 0.754 - 0.813 - homeobox B8b [Source:ZFIN;Acc:ZDB-GENE-980526-291]
76. sap30bp ENSDARG00000031261 1348 1.564 - 0.702 - - - - 0.862 - - SAP30 binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-457]
77. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 1.564 - - - - - - 0.709 - 0.855 ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
78. ndufb5 ENSDARG00000070824, ENSDARG00000116923 9287 1.559 - - - - - - 0.753 0.806 - NADH:ubiquinone oxidoreductase subunit B5 [Source:ZFIN;Acc:ZDB-GENE-011010-1]
79. lhx5 ENSDARG00000057936 785 1.556 - - - - - 0.791 - - 0.765 LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
80. fbxo45 ENSDARG00000071492, ENSDARG00000111553 732 1.556 - - - - - 0.751 0.805 - - F-box protein 45 [Source:ZFIN;Acc:ZDB-GENE-040426-1450]
81. txnl4a ENSDARG00000036190 2048 1.555 - - - - - - 0.708 - 0.847 thioredoxin-like 4A [Source:ZFIN;Acc:ZDB-GENE-041010-25]
82. rac1 rac1 7341 1.554 - - - - - - 0.754 0.800 -
83. ZBTB16 ZBTB16 3385 1.55 - - - - - - - 0.811 0.739
84. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 1.548 - - - - - 0.755 - - 0.793 ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
85. AKT3 AKT3 1729 1.548 - - - - - 0.754 - - 0.794
86. arid1b ENSDARG00000092503 1376 1.548 - - - - - - 0.707 - 0.841 AT rich interactive domain 1B (SWI1-like) [Source:ZFIN;Acc:ZDB-GENE-030131-4459]
87. sumo3b ENSDARG00000035993 3414 1.545 - - - - - - 0.706 - 0.839 small ubiquitin-like modifier 3b [Source:ZFIN;Acc:ZDB-GENE-040718-426]
88. BX511086.1 BX511086.1 8308 1.544 - - - - - 0.809 0.735 - -
89. dnajc19 ENSDARG00000044420 1756 1.542 - 0.705 - - - - - - 0.837 DnaJ (Hsp40) homolog, subfamily C, member 19 [Source:ZFIN;Acc:ZDB-GENE-040426-1730]
90. tmsb ENSDARG00000054911 6411 1.541 - - - - - 0.769 0.772 - - thymosin, beta [Source:ZFIN;Acc:ZDB-GENE-050307-5]
91. zgc:100920 ENSDARG00000042961, ENSDARG00000112929 1384 1.541 - - - - - 0.755 0.786 - - zgc:100920 [Source:ZFIN;Acc:ZDB-GENE-040801-156]
92. abi2b ENSDARG00000014875 2259 1.54 - - - - - 0.747 - - 0.793 abl-interactor 2b [Source:ZFIN;Acc:ZDB-GENE-060519-5]
93. pou4f2 ENSDARG00000069737 451 1.538 - - - - - 0.725 - - 0.813 POU class 4 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-040401-1]
94. si:ch211-197h24.6 ENSDARG00000091631 1933 1.536 - 0.765 - - - - 0.771 - - si:ch211-197h24.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1361]
95. PAX7 PAX7 1658 1.534 - - - - - 0.735 - - 0.799
96. CASK CASK 1750 1.531 - - - - - 0.723 - - 0.808
97. ppp1r14c ENSDARG00000077341 1587 1.53 - - - - - - 0.743 - 0.787 protein phosphatase 1, regulatory (inhibitor) subunit 14C [Source:ZFIN;Acc:ZDB-GENE-050706-92]
98. slc1a2b ENSDARG00000102453 3136 1.528 - - - - - 0.799 - - 0.729 solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
99. MRPS36 ENSDARG00000079823, ENSDARG00000113427 3694 1.522 - - - - - - 0.710 0.812 - mitochondrial ribosomal protein S36 [Source:ZFIN;Acc:ZDB-GENE-081104-343]
100. scn4ba ENSDARG00000099031 1634 1.521 - - - - - 0.742 0.779 - - sodium channel, voltage-gated, type IV, beta a [Source:ZFIN;Acc:ZDB-GENE-070615-18]

There are 1722 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA