Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CDHR1

Gene Name Gene ID Reads Annotation
CDHR1 ENSGALG00000002314 24 cadherin related family member 1 [Source:NCBI gene;Acc:414847]











Genes with expression patterns similar to CDHR1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CDHR1 ENSGALG00000002314 24 3 - - - 1.000 1.000 - - 1.000 - - cadherin related family member 1 [Source:NCBI gene;Acc:414847]
2. ALOX5 ENSGALG00000005857 73 1.543 - - - - 0.735 - - 0.808 - - arachidonate 5-lipoxygenase [Source:HGNC Symbol;Acc:HGNC:435]
3. DDO ENSGALG00000015057 25 1.46 - - - 0.751 0.709 - - - - - D-aspartate oxidase [Source:HGNC Symbol;Acc:HGNC:2727]
4. DBN1 ENSGALG00000033405 216 1 - - - - - - - 1.000 - - drebrin 1 [Source:NCBI gene;Acc:396496]
5. snoZ39 snoZ39 2 1 - - - - - - - 1.000 - -
6. FAM214B ENSGALG00000002069, ENSGALG00000038279 213 1 - - - - - - - 1.000 - - family with sequence similarity 214 member B, transcript variant X14
7. ALKBH3 ENSGALG00000041309 7 1 - - - - - - - 1.000 - - alkB homolog 3, alpha-ketoglutaratedependent dioxygenase [Source:NCBI gene;Acc:423169]
8. GABRA5 ENSGALG00000016744 12 1 - - - - - - - 1.000 - - gamma-aminobutyric acid type A receptor alpha5 subunit [Source:HGNC Symbol;Acc:HGNC:4079]
9. ENSGALG00000023027 ENSGALG00000023027 5 1 - - - - - - - 1.000 - -
10. SPATA4 ENSGALG00000010822 4 1 - - - - - - - 1.000 - - spermatogenesis associated 4 [Source:NCBI gene;Acc:422571]
11. ACACB 6 1 - - - - - - - 1.000 - - acetyl-CoA carboxylase beta
12. TREM-B1 ENSGALG00000003361 8 1 - - - - - - - 1.000 - - triggering receptor expressed on myeloid cells B1 [Source:NCBI gene;Acc:768535]
13. GTPBP6 ENSGALG00000016717 17 1 - - - - - - - 1.000 - - GTP binding protein 6 (putative) [Source:HGNC Symbol;Acc:HGNC:30189]
14. MUC13 7 1 - - - - - - - 1.000 - - mucin 13, cell surface associated, transcript variant X10
15. SUSD1 ENSGALG00000015677 12 1 - - - - - - - 1.000 - - sushi domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25413]
16. C1orf228 3 1 - - - - - - - 1.000 - - chromosome 1 open reading frame 228, transcript variant X5
17. SFT2D2 ENSGALG00000019228 10 1 - - - - - - - 1.000 - - SFT2 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25140]
18. GPR17 ENSGALG00000037153 3 1 - - - - - - - 1.000 - - G protein-coupled receptor 17 [Source:HGNC Symbol;Acc:HGNC:4471]
19. SLC30A8 ENSGALG00000034377 3 1 - - - - - - - 1.000 - - solute carrier family 30 member 8 [Source:HGNC Symbol;Acc:HGNC:20303]
20. CD101 12 1 - - - - - - - 1.000 - - CD101 molecule, transcript variant X4
21. ENSGALG00000023353 ENSGALG00000023353 1 1 - - - - - - - 1.000 - -
22. GP5 ENSGALG00000045125 3 1 - - - - - - - 1.000 - - glycoprotein V platelet [Source:HGNC Symbol;Acc:HGNC:4443]
23. GSAP ENSGALG00000008312 12 1 - - - - - - - 1.000 - - gamma-secretase activating protein [Source:HGNC Symbol;Acc:HGNC:28042]
24. SOX10 ENSGALG00000012290 3942 1 - - - - - - - 1.000 - - SRY-box 10 [Source:NCBI gene;Acc:395573]
25. ENSGALG00000028652 ENSGALG00000028652 65 1 - - - - - - - 1.000 - -
26. HBP1 ENSGALG00000008050 19 1 - - - - - - - 1.000 - - HMG-box transcription factor 1 [Source:NCBI gene;Acc:417705]
27. SWAP70 ENSGALG00000005750 32 0.997 - - - - - - - 0.997 - - switching B cell complex subunit SWAP70 [Source:NCBI gene;Acc:423044]
28. GABRA2 ENSGALG00000014206 19 0.994 - - - - - - - 0.994 - - gamma-aminobutyric acid type A receptor alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:4076]
29. PTBP3 ENSGALG00000015669 16 0.984 - - - - - - - 0.984 - - polypyrimidine tract binding protein 3 [Source:HGNC Symbol;Acc:HGNC:10253]
30. TOM1L2 ENSGALG00000004902 89 0.978 - - - - - - - 0.978 - - target of myb1 like 2 membrane trafficking protein [Source:NCBI gene;Acc:416509]
31. NMRAL1 ENSGALG00000029820 29 0.97 - - - - - - - 0.970 - - NmrA like redox sensor 1 [Source:NCBI gene;Acc:416672]
32. SRRL ENSGALG00000002638 26 0.97 - - - - - - - 0.970 - - serine racemase-like, transcript variant X8
33. INSC ENSGALG00000032558 74 0.968 - - - - - - - 0.968 - - INSC, spindle orientation adaptor protein [Source:HGNC Symbol;Acc:HGNC:33116]
34. PRKRIR PRKRIR 46 0.968 - - - - - - - 0.968 - -
35. ENSGALG00000020972 ENSGALG00000020972 54 0.955 - - - - - - - 0.955 - -
36. MAP3K13 ENSGALG00000006655 632 0.954 - - - - - - - 0.954 - - mitogen-activated protein kinase kinase kinase 13 [Source:HGNC Symbol;Acc:HGNC:6852]
37. HECTD2 ENSGALG00000038043 177 0.953 - - - - - - - 0.953 - - HECT domain E3 ubiquitin protein ligase 2 [Source:HGNC Symbol;Acc:HGNC:26736]
38. ZP1 ENSGALG00000031916 122 0.953 - - - - - - - 0.953 - - zona pellucida glycoprotein 1 [Source:NCBI gene;Acc:395418]
39. URB2 ENSGALG00000011101 12 0.953 - - - - - - - 0.953 - - URB2 ribosome biogenesis 2 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:HGNC:28967]
40. CHGB ENSGALG00000046616 357 0.948 - - - - - - - 0.948 - - chromogranin B [Source:HGNC Symbol;Acc:HGNC:1930]
41. RAB43 ENSGALG00000005021 5 0.946 - - - - - - - 0.946 - - RAB43, member RAS oncogene family [Source:NCBI gene;Acc:415970]
42. PWWP2B ENSGALG00000010491 30 0.945 - - - - - - - 0.945 - - PWWP domain containing 2B [Source:HGNC Symbol;Acc:HGNC:25150]
43. BFIV21 BFIV21 30 0.938 - - - - - - - 0.938 - -
44. ZNF507 ENSGALG00000004532 78 0.938 - - - - - - - 0.938 - - zinc finger protein 507, transcript variant X2
45. BBS9 ENSGALG00000031650 13 0.935 - - - - - - - 0.935 - - Bardet-Biedl syndrome 9, transcript variant X5
46. RAD54L2 ENSGALG00000003243 187 0.933 - - - - - - - 0.933 - - RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
47. PTPRQ ENSGALG00000010935 626 0.922 - - - - - - - 0.922 - - protein tyrosine phosphatase, receptor type Q [Source:HGNC Symbol;Acc:HGNC:9679]
48. ENSGALG00000026756 ENSGALG00000026756 134 0.922 - - - - - - - 0.922 - -
49. IQUB ENSGALG00000008823 65 0.908 - - - - - - - 0.908 - - IQ motif and ubiquitin domain containing [Source:HGNC Symbol;Acc:HGNC:21995]
50. JAKMIP1 ENSGALG00000015528 11 0.907 - - - 0.907 - - - - - - janus kinase and microtubule interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:26460]
51. IKZF1 ENSGALG00000013086 58 0.902 - - - - - - - 0.902 - - IKAROS family zinc finger 1 [Source:NCBI gene;Acc:395974]
52. SSBP2 ENSGALG00000023089 131 0.893 - - - - - - - 0.893 - - single stranded DNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:15831]
53. LOC416530 ENSGALG00000005291 207 0.893 - - - - - - - 0.893 - - uncharacterized LOC416530, transcript variant X1
54. AVD ENSGALG00000023622 22 0.893 - - - 0.893 - - - - - - avidin [Source:NCBI gene;Acc:396260]
55. ENSGALG00000023735 ENSGALG00000023735 12 0.893 - - - - - - - 0.893 - -
56. SNORD94 SNORD94 10 0.888 - - - 0.888 - - - - - -
57. SPERT ENSGALG00000016981 145 0.888 - - - 0.888 - - - - - - spermatid associated [Source:NCBI gene;Acc:418848]
58. ENSGALG00000019805 ENSGALG00000019805 3 0.888 - - - 0.888 - - - - - -
59. C1orf173 C1orf173 3 0.888 - - - 0.888 - - - - - -
60. EDIL3 ENSGALG00000015630 7 0.888 - - - 0.888 - - - - - - EGF like repeats and discoidin domains 3 [Source:HGNC Symbol;Acc:HGNC:3173]
61. ECSCR ENSGALG00000024379 313 0.887 - - - - - - - 0.887 - - endothelial cell surface expressed chemotaxis and apoptosis regulator, transcript variant X2
62. gga-mir-2954 ENSGALG00000026107 462 0.878 - - - - - - - 0.878 - - gga-mir-2954 [Source:miRBase;Acc:MI0013634]
63. KAZN ENSGALG00000013642 17 0.876 - - - 0.876 - - - - - - kazrin, periplakin interacting protein [Source:HGNC Symbol;Acc:HGNC:29173]
64. C15orf61 ENSGALG00000028141 56 0.875 - - - - - - - 0.875 - - chromosome 15 open reading frame 61 [Source:NCBI gene;Acc:101747767]
65. CLEC18B ENSGALG00000027183 284 0.873 - - - - - - - 0.873 - - C-type lectin domain family 18 member B, transcript variant X2
66. PTGS1 ENSGALG00000001314 7 0.873 - - - 0.873 - - - - - - prostaglandin-endoperoxide synthase 1 [Source:HGNC Symbol;Acc:HGNC:9604]
67. WNT4 ENSGALG00000041708 1277 0.87 - - - - - - - 0.870 - - Wnt family member 4 [Source:NCBI gene;Acc:395561]
68. MLH3 ENSGALG00000010304 231 0.868 - - - - - - - 0.868 - - mutL homolog 3 [Source:HGNC Symbol;Acc:HGNC:7128]
69. EGLN3 ENSGALG00000010001 32 0.866 - - - 0.866 - - - - - - egl-9 family hypoxia inducible factor 3 [Source:HGNC Symbol;Acc:HGNC:14661]
70. FANCF ENSGALG00000003660 25 0.859 - - - - - - - 0.859 - - FA complementation group F [Source:HGNC Symbol;Acc:HGNC:3587]
71. UPRT ENSGALG00000007793 321 0.859 - - - - - - - 0.859 - - uracil phosphoribosyltransferase homolog [Source:NCBI gene;Acc:422327]
72. LHFP 167 0.845 - - - - - - - 0.845 - - lipoma HMGIC fusion partner
73. RNASET2 ENSGALG00000011426 40 0.842 - - - 0.842 - - - - - - ribonuclease T2 [Source:NCBI gene;Acc:421569]
74. SNTG2 ENSGALG00000016367 42 0.835 - - - 0.835 - - - - - - syntrophin gamma 2 [Source:HGNC Symbol;Acc:HGNC:13741]
75. USH1C ENSGALG00000006192 63 0.83 - - - - - - - 0.830 - - USH1 protein network component harmonin [Source:HGNC Symbol;Acc:HGNC:12597]
76. CDK5RAP3 ENSGALG00000036452 693 0.828 - - - - - - - 0.828 - - CDK5 regulatory subunit associated protein 3 [Source:NCBI gene;Acc:430350]
77. PDZRN4 ENSGALG00000009530 832 0.828 - - - - - - - 0.828 - - PDZ domain containing ring finger 4 [Source:HGNC Symbol;Acc:HGNC:30552]
78. USP48 ENSGALG00000030857 471 0.821 - - - - - - - 0.821 - - ubiquitin specific peptidase 48 [Source:NCBI gene;Acc:769457]
79. TNKS ENSGALG00000043164 102 0.818 - - - 0.818 - - - - - - tankyrase [Source:NCBI gene;Acc:374252]
80. ELFN1 ENSGALG00000004209 114 0.817 - - - - - - - 0.817 - - extracellular leucine rich repeat and fibronectin type III domain containing 1 [Source:HGNC Symbol;Acc:HGNC:33154]
81. FOLH1 ENSGALG00000017234 9 0.817 - - - 0.817 - - - - - - folate hydrolase 1 [Source:HGNC Symbol;Acc:HGNC:3788]
82. LITAF ENSGALG00000003217 7 0.808 - - - - - - - 0.808 - - lipopolysaccharide induced TNF factor [Source:NCBI gene;Acc:374125]
83. KHDRBS2 ENSGALG00000016276 110 0.808 - - - - - - - 0.808 - - KH RNA binding domain containing, signal transduction associated 2 [Source:HGNC Symbol;Acc:HGNC:18114]
84. MARVELD3 ENSGALG00000012886 155 0.806 - - - - - - - 0.806 - - MARVEL domain containing 3
85. TBC1D8B ENSGALG00000009040 75 0.802 - - - - - - - 0.802 - - TBC1 domain family member 8B [Source:HGNC Symbol;Acc:HGNC:24715]
86. GPRIN2 ENSGALG00000002048 17 0.801 - - - 0.801 - - - - - - G protein regulated inducer of neurite outgrowth 2 [Source:NCBI gene;Acc:395648]
87. LRRC58 ENSGALG00000033186 15 0.799 - - - - - - - 0.799 - - leucine rich repeat containing 58 [Source:HGNC Symbol;Acc:HGNC:26968]
88. HNF4G ENSGALG00000042621 484 0.796 - - - - - - - 0.796 - - hepatocyte nuclear factor 4 gamma [Source:HGNC Symbol;Acc:HGNC:5026]
89. PROCA1 668 0.795 - - - - - - - 0.795 - - protein interacting with cyclin A1
90. ENSGALG00000029113 ENSGALG00000029113 737 0.792 - - - 0.792 - - - - - -
91. URAH ENSGALG00000000549 484 0.792 - - - 0.792 - - - - - - 5-hydroxyisourate hydrolase [Source:NCBI gene;Acc:415859]
92. MEGF6L ENSGALG00000009458 14 0.791 - - - 0.791 - - - - - - multiple EGF-like-domains 6-like, transcript variant X21
93. CPEB4 ENSGALG00000033512 779 0.789 - - - - - - - 0.789 - - cytoplasmic polyadenylation element binding protein 4 [Source:HGNC Symbol;Acc:HGNC:21747]
94. DSEL ENSGALG00000042505 92 0.789 - - - - - - - 0.789 - - dermatan sulfate epimerase like [Source:HGNC Symbol;Acc:HGNC:18144]
95. ASPN ENSGALG00000004722 6 0.78 - - - 0.780 - - - - - - asporin [Source:HGNC Symbol;Acc:HGNC:14872]
96. ISOC1 ENSGALG00000000161 46 0.779 - - - - - - - 0.779 - - isochorismatase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24254]
97. A1CF ENSGALG00000003765 36 0.779 - - - - - - - 0.779 - - APOBEC1 complementation factor [Source:HGNC Symbol;Acc:HGNC:24086]
98. ENSGALG00000017691 ENSGALG00000017691 48 0.777 - - - - - - - 0.777 - -
99. TRABD2A ENSGALG00000026395 704 0.776 - - - - - - - 0.776 - - TraB domain containing 2A, transcript variant X3
100. ABCA2 ENSGALG00000036894 12 0.77 - - - - - - - 0.770 - - ATP binding cassette subfamily A member 2 [Source:HGNC Symbol;Acc:HGNC:32]

There are 30 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA