Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for CDH7

Gene Name Gene ID Reads Annotation
CDH7 16 cadherin 7, type 2, transcript variant X1










Genes with expression patterns similar to CDH7

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. CDH7 16 8 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 cadherin 7, type 2, transcript variant X1
2. CABZ01071530.2 CABZ01071530.2 47 2.429 0.715 1.000 - - - 0.714 - - -
3. rsph4a ENSDARG00000067606 132 1.943 1.000 0.943 - - - - - - - radial spoke head component 4A [Source:ZFIN;Acc:ZDB-GENE-030131-7437]
4. si:dkey-286j17.4 ENSDARG00000093402 1 1.877 - 1.000 - - - 0.877 - - - si:dkey-286j17.4 [Source:ZFIN;Acc:ZDB-GENE-130530-2]
5. WNK3 WNK3 36 1.877 1.000 - - - - 0.877 - - -
6. ciita ENSDARG00000090851 5 1.83 - - - - 0.953 0.877 - - - class II, major histocompatibility complex, transactivator [Source:ZFIN;Acc:ZDB-GENE-071116-6]
7. CELF3 CELF3 163 1.821 - 0.945 - - - 0.876 - - -
8. TRPM4 TRPM4 60 1.784 1.000 - 0.784 - - - - - -
9. neurod neurod 1189 1.726 - 0.853 - - - 0.873 - - -
10. ZSWIM2 ENSDARG00000075700 8 1.724 - - 0.847 - - 0.877 - - - zinc finger, SWIM-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-070719-8]
11. si:ch211-38m6.6 ENSDARG00000076959 12 1.704 - 0.704 - - - 1.000 - - - si:ch211-38m6.6 [Source:ZFIN;Acc:ZDB-GENE-070705-179]
12. crispld1a ENSDARG00000077275 7 1.704 1.000 0.704 - - - - - - - cysteine-rich secretory protein LCCL domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-090612-1]
13. RIMS1 RIMS1 9 1.704 1.000 0.704 - - - - - - -
14. lmx1a ENSDARG00000020354 111 1.704 1.000 0.704 - - - - - - - LIM homeobox transcription factor 1, alpha [Source:ZFIN;Acc:ZDB-GENE-041014-332]
15. adrb1_1 ENSDARG00000007490, ENSDARG00000115574 9 1.704 1.000 0.704 - - - - - - - adrenoceptor beta 1 [Source:ZFIN;Acc:ZDB-GENE-081022-145]
16. trim46b ENSDARG00000058649 54 1.704 - 0.704 - - - 1.000 - - - tripartite motif containing 46b [Source:ZFIN;Acc:ZDB-GENE-060503-466]
17. GRIK3 ENSDARG00000077715 178 1.704 1.000 0.704 - - - - - - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
18. gnb5b ENSDARG00000055377 98 1.703 0.758 0.945 - - - - - - - guanine nucleotide binding protein (G protein), beta 5b [Source:ZFIN;Acc:ZDB-GENE-040426-1712]
19. cnih2 ENSDARG00000043662, ENSDARG00000110467, ENSDARG00000113176 74 1.644 0.767 - - - - 0.877 - - - cornichon family AMPA receptor auxiliary protein 2 [Source:ZFIN;Acc:ZDB-GENE-050320-96]
20. gfra3 ENSDARG00000087704 122 1.611 - 0.704 - - - 0.907 - - - GDNF family receptor alpha 3 [Source:ZFIN;Acc:ZDB-GENE-110512-1]
21. adck4 7 1.611 0.764 - 0.847 - - - - - - aarF domain containing kinase 4, transcript variant X2
22. sox12 ENSDARG00000025847 681 1.599 0.895 0.704 - - - - - - - SRY (sex determining region Y)-box 12 [Source:ZFIN;Acc:ZDB-GENE-040724-33]
23. nxph1 ENSDARG00000033447 182 1.596 0.711 0.885 - - - - - - - neurexophilin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-231]
24. arntl2 ENSDARG00000041381, ENSDARG00000109690, ENSDARG00000116327 56 1.584 0.707 - - - - 0.877 - - - aryl hydrocarbon receptor nuclear translocator-like 2 [Source:ZFIN;Acc:ZDB-GENE-000509-2]
25. nfixa ENSDARG00000043226 14 1.581 - 0.704 - - - 0.877 - - - nuclear factor I/Xa [Source:ZFIN;Acc:ZDB-GENE-080722-15]
26. si:dkey-200l5.4 ENSDARG00000095294 13 1.581 - 0.704 - - - 0.877 - - - si:dkey-200l5.4 [Source:ZFIN;Acc:ZDB-GENE-091204-393]
27. scdb ENSDARG00000030265 271 1.576 0.762 0.814 - - - - - - - stearoyl-CoA desaturase b [Source:ZFIN;Acc:ZDB-GENE-050522-12]
28. jagn1a ENSDARG00000041071, ENSDARG00000109427 397 1.544 0.751 0.793 - - - - - - - jagunal homolog 1a [Source:ZFIN;Acc:ZDB-GENE-041010-80]
29. tmem91 ENSDARG00000068456 81 1.544 0.840 0.704 - - - - - - - transmembrane protein 91 [Source:ZFIN;Acc:ZDB-GENE-060503-581]
30. NPPC ENSDARG00000068126 45 1.541 - 0.704 - - - 0.837 - - - natriuretic peptide C [Source:ZFIN;Acc:ZDB-GENE-070705-24]
31. zgc:110249 ENSDARG00000035221 68 1.537 0.799 - - - - 0.738 - - - zgc:110249 [Source:ZFIN;Acc:ZDB-GENE-050522-331]
32. 5S_rRNA_2 5S_rRNA_2 89 1.526 0.715 - 0.811 - - - - - -
33. scg5 ENSDARG00000032126, ENSDARG00000077045 29 1.524 0.820 0.704 - - - - - - - secretogranin V [Source:ZFIN;Acc:ZDB-GENE-040426-1687]
34. GJD2_1 GJD2_1 3045 1.524 0.820 0.704 - - - - - - -
35. ABCA7 ABCA7 12 1.516 - 0.704 - - 0.812 - - - -
36. b3gat1 b3gat1 77 1.511 0.777 - - - - 0.734 - - -
37. fancg ENSDARG00000024967, ENSDARG00000113462 82 1.479 - 0.778 0.701 - - - - - - FA complementation group G [Source:ZFIN;Acc:ZDB-GENE-050417-103]
38. pif1 ENSDARG00000020289 216 1.468 0.764 0.704 - - - - - - - PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-4928]
39. chrna5 ENSDARG00000003420 137 1.458 0.747 - - - - 0.711 - - - cholinergic receptor, nicotinic, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-050417-440]
40. si:dkey-169l5.3 si:dkey-169l5.3 239 1.444 0.723 - - - - 0.721 - - -
41. pkd2l1 ENSDARG00000022503 372 1.427 - 0.700 - - - 0.727 - - - polycystic kidney disease 2-like 1 [Source:ZFIN;Acc:ZDB-GENE-030616-558]
42. tnr ENSDARG00000020771 20 1 1.000 - - - - - - - - tenascin R (restrictin, janusin) [Source:ZFIN;Acc:ZDB-GENE-030804-1]
43. mir15a-1 36 1 1.000 - - - - - - - - microRNA 15a-1
44. PLBD1 ENSDARG00000063313 1 1 1.000 - - - - - - - - phospholipase B domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050411-22]
45. GPR64 GPR64 58 1 1.000 - - - - - - - -
46. sycp2 ENSDARG00000088950 3 1 1.000 - - - - - - - - synaptonemal complex protein 2 [Source:ZFIN;Acc:ZDB-GENE-090313-237]
47. si:ch211-284d12.1 si:ch211-284d12.1 1 1 1.000 - - - - - - - -
48. si:ch211-286e11.3 si:ch211-286e11.3 20 1 1.000 - - - - - - - -
49. si:ch211-190k17.31 si:ch211-190k17.31 29 1 1.000 - - - - - - - -
50. hs6st3b ENSDARG00000069500 5 1 1.000 - - - - - - - - heparan sulfate 6-O-sulfotransferase 3b [Source:ZFIN;Acc:ZDB-GENE-070103-3]
51. CABZ01090951.1 CABZ01090951.1 78 1 1.000 - - - - - - - -
52. si:ch73-280o22.2 ENSDARG00000077072 67 1 1.000 - - - - - - - - si:ch73-280o22.2 [Source:ZFIN;Acc:ZDB-GENE-141216-272]
53. ntng1a ENSDARG00000014973 23 1 1.000 - - - - - - - - netrin g1a [Source:ZFIN;Acc:ZDB-GENE-091118-13]
54. CR759879.1 ENSDARG00000088069 1 1 1.000 - - - - - - - - interferon-induced protein with tetratricopeptide repeats 5 [Source:NCBI gene;Acc:572297]
55. ablim1a ENSDARG00000060149 228 1 1.000 - - - - - - - - actin binding LIM protein 1a [Source:ZFIN;Acc:ZDB-GENE-080219-41]
56. si:ch73-115f13.1 si:ch73-115f13.1 15 1 1.000 - - - - - - - -
57. SH3RF3 ENSDARG00000102334 1 1 1.000 - - - - - - - - SH3 domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:24699]
58. mir92a-1 20 1 1.000 - - - - - - - - microRNA 92a-1
59. IMPG2 IMPG2 1 1 1.000 - - - - - - - -
60. lcmt2 ENSDARG00000000747, ENSDARG00000110257 97 1 1.000 - - - - - - - - leucine carboxyl methyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-110714-2]
61. cldn15lb ENSDARG00000100844 46 1 1.000 - - - - - - - - claudin 15-like b [Source:ZFIN;Acc:ZDB-GENE-040718-145]
62. si:dkey-233e3.6 si:dkey-233e3.6 1 1 1.000 - - - - - - - -
63. qkib ENSDARG00000002026 15 1 - - - - - 1.000 - - - QKI, KH domain containing, RNA binding b [Source:ZFIN;Acc:ZDB-GENE-081028-54]
64. nfixb ENSDARG00000061836 7 1 1.000 - - - - - - - - nuclear factor I/Xb [Source:ZFIN;Acc:ZDB-GENE-060421-5000]
65. dctn1b ENSDARG00000056753 6 1 - 1.000 - - - - - - - dynactin 1b [Source:ZFIN;Acc:ZDB-GENE-050419-28]
66. EMB ENSDARG00000059485 35 1 1.000 - - - - - - - - embigin [Source:ZFIN;Acc:ZDB-GENE-070705-158]
67. zgc:193807 ENSDARG00000076652, ENSDARG00000105440 34 1 1.000 - - - - - - - - zgc:193807 [Source:ZFIN;Acc:ZDB-GENE-081022-42]
68. znf384l ENSDARG00000001015 137 1 1.000 - - - - - - - - zinc finger protein 384 like [Source:ZFIN;Acc:ZDB-GENE-030616-498]
69. got1 ENSDARG00000039093 1 1 1.000 - - - - - - - - glutamic-oxaloacetic transaminase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-040426-2003]
70. snrnp35 ENSDARG00000099913 21 1 - 1.000 - - - - - - - small nuclear ribonucleoprotein 35 (U11/U12) [Source:ZFIN;Acc:ZDB-GENE-050706-77]
71. rhbdd3 ENSDARG00000079816 2 1 1.000 - - - - - - - - rhomboid domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-39]
72. myrip ENSDARG00000038814 103 1 1.000 - - - - - - - - myosin VIIA and Rab interacting protein [Source:ZFIN;Acc:ZDB-GENE-080123-1]
73. DNHD1 DNHD1 4 1 - - - - - 1.000 - - -
74. tbc1d9 ENSDARG00000043627, ENSDARG00000059900 3 1 1.000 - - - - - - - - TBC1 domain family, member 9 (with GRAM domain) [Source:ZFIN;Acc:ZDB-GENE-060810-33]
75. dnah7 ENSDARG00000060165 21 1 1.000 - - - - - - - - dynein, axonemal, heavy chain 7 [Source:ZFIN;Acc:ZDB-GENE-070912-282]
76. MPV17L MPV17L 39 1 - - - - - 1.000 - - -
77. stk32a ENSDARG00000079499 17 1 1.000 - - - - - - - - serine/threonine kinase 32A [Source:ZFIN;Acc:ZDB-GENE-091204-271]
78. DUSP19 DUSP19 10 1 1.000 - - - - - - - -
79. si:ch211-197k17.3 ENSDARG00000096214 2 1 - - - - 1.000 - - - - si:ch211-197k17.3 [Source:ZFIN;Acc:ZDB-GENE-110914-193]
80. CABZ01072096.1 ENSDARG00000079483 168 1 1.000 - - - - - - - -
81. kiss2 ENSDARG00000077985 2 1 1.000 - - - - - - - - kisspeptin 2 [Source:ZFIN;Acc:ZDB-GENE-090526-1]
82. si:ch211-231i17.5 si:ch211-231i17.5 154 1 1.000 - - - - - - - -
83. si:dkeyp-53d3.5 ENSDARG00000101542 171 1 - - - - - 1.000 - - - si:dkeyp-53d3.5 [Source:ZFIN;Acc:ZDB-GENE-050208-485]
84. si:rp71-18l21.1 si:rp71-18l21.1 2 1 1.000 - - - - - - - -
85. BX000430.1 ENSDARG00000112057 135 1 1.000 - - - - - - - - phospholipid phosphatase related 3b [Source:NCBI gene;Acc:570173]
86. fstl5 ENSDARG00000040198 213 1 1.000 - - - - - - - - follistatin-like 5 [Source:ZFIN;Acc:ZDB-GENE-070127-1]
87. CABZ01072254.1 ENSDARG00000076111 4 1 1.000 - - - - - - - - glucoside xylosyltransferase 1a [Source:NCBI gene;Acc:100333154]
88. gria2b ENSDARG00000052765 188 1 1.000 - - - - - - - - glutamate receptor, ionotropic, AMPA 2b [Source:ZFIN;Acc:ZDB-GENE-020125-4]
89. PLXNA1 PLXNA1 2 1 1.000 - - - - - - - -
90. si:dkey-191g9.5 ENSDARG00000056080 60 1 1.000 - - - - - - - - si:dkey-191g9.5 [Source:ZFIN;Acc:ZDB-GENE-090313-217]
91. exosc4 ENSDARG00000103432 21 1 - - - - - 1.000 - - - exosome component 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1702]
92. secisbp2 ENSDARG00000073892 79 1 - 1.000 - - - - - - - SECIS binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050208-263]
93. si:dkey-34f16.9 si:dkey-34f16.9 1 1 1.000 - - - - - - - -
94. ripply2 ENSDARG00000070535 18 1 1.000 - - - - - - - - ripply transcriptional repressor 2 [Source:ZFIN;Acc:ZDB-GENE-060113-2]
95. mir219-1 101 1 1.000 - - - - - - - - microRNA 219-1
96. grpr ENSDARG00000056620 66 1 1.000 - - - - - - - - gastrin-releasing peptide receptor [Source:ZFIN;Acc:ZDB-GENE-081015-4]
97. CABZ01085626.1 ENSDARG00000117294 8 1 1.000 - - - - - - - -
98. cpa2 ENSDARG00000010146 28 1 1.000 - - - - - - - - carboxypeptidase A2 (pancreatic) [Source:ZFIN;Acc:ZDB-GENE-040801-182]
99. CR382372.1 ENSDARG00000096684 2 1 1.000 - - - - - - - - si:dkeyp-122d12.1 [Source:NCBI gene;Acc:101885973]
100. NPDC1 NPDC1 126 1 1.000 - - - - - - - -

There are 998 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA