Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CDH6

Gene Name Gene ID Reads Annotation
CDH6 ENSGALG00000012917 17 cadherin 6 [Source:NCBI gene;Acc:414842]











Genes with expression patterns similar to CDH6

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CDH6 ENSGALG00000012917 17 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 cadherin 6 [Source:NCBI gene;Acc:414842]
2. ENSGALG00000013079 ENSGALG00000013079 12 1.844 - - 1.000 0.844 - - - - - -
3. XKRX ENSGALG00000006637 13 1.844 - - - 0.844 - 1.000 - - - - XK related, X-linked, transcript variant X4
4. ZDHHC3 ENSGALG00000029266 11 1.84 - - 0.976 - - 0.864 - - - - zinc finger DHHC-type containing 3 [Source:HGNC Symbol;Acc:HGNC:18470]
5. P2RY13 ENSGALG00000039432 16 1.783 - - - - - - - 0.851 - 0.932 purinergic receptor P2Y13 [Source:HGNC Symbol;Acc:HGNC:4537]
6. HOMER1 ENSGALG00000014813 19 1.776 - - 0.776 - - - 1.000 - - - homer scaffold protein 1 [Source:HGNC Symbol;Acc:HGNC:17512]
7. UBE4B ENSGALG00000002649 39 1.742 - - 0.742 - - - 1.000 - - - ubiquitination factor E4B [Source:HGNC Symbol;Acc:HGNC:12500]
8. ENSGALG00000015743 ENSGALG00000015743 22 1.718 - - - - - - 0.833 0.885 - -
9. SCG2 ENSGALG00000029819 26 1.716 - - - - - - 0.724 0.992 - - secretogranin II [Source:HGNC Symbol;Acc:HGNC:10575]
10. MUC5B MUC5B 62 1.71 - - - 0.727 - 0.983 - - - -
11. ESR2 ENSGALG00000011801 7 1.702 - - - - - 0.715 - - - 0.987 estrogen receptor 2 [Source:NCBI gene;Acc:395575]
12. GPR146 ENSGALG00000004058 302 1.693 - - - - 0.843 0.850 - - - - G protein-coupled receptor 146 [Source:NCBI gene;Acc:416456]
13. PAFAH2 ENSGALG00000021658 68 1.649 - - 0.721 - - 0.928 - - - - platelet activating factor acetylhydrolase 2 [Source:HGNC Symbol;Acc:HGNC:8579]
14. CRB2 ENSGALG00000001169 23 1.542 - - - - - 0.736 - 0.806 - - crumbs 2, cell polarity complex component [Source:HGNC Symbol;Acc:HGNC:18688]
15. JDP2 ENSGALG00000010322 11 1.541 - - 0.816 0.725 - - - - - - Jun dimerization protein 2 [Source:NCBI gene;Acc:423363]
16. ENSGALG00000028936 ENSGALG00000028936 57 1.509 - - - - - 0.742 - - - 0.767
17. VPS72 ENSGALG00000000793 329 1.484 - - - 0.732 - - - 0.752 - - vacuolar protein sorting 72 homolog [Source:HGNC Symbol;Acc:HGNC:11644]
18. DLX3 ENSGALG00000040529 37 1.432 - - - 0.714 - - - 0.718 - - Gallus gallus distal-less homeobox 3 (DLX3), mRNA. [Source:RefSeq mRNA;Acc:NM_204804]
19. GBP ENSGALG00000026152 38 1.429 - - 0.722 - - - - 0.707 - - Gallus gallus guanylate binding protein (GBP), mRNA. [Source:RefSeq mRNA;Acc:NM_204652]
20. GTF3C3 ENSGALG00000007958 6 1 - - - - - - - 1.000 - - general transcription factor IIIC subunit 3 [Source:NCBI gene;Acc:424052]
21. ANKS3 ENSGALG00000000643 2 1 - - - - - - - 1.000 - - ankyrin repeat and sterile alpha motif domain containing 3 [Source:HGNC Symbol;Acc:HGNC:29422]
22. TG ENSGALG00000039509 19 1 - - - - - - - 1.000 - - thyroglobulin [Source:HGNC Symbol;Acc:HGNC:11764]
23. ENSGALG00000002367 ENSGALG00000002367 10 1 - - 1.000 - - - - - - -
24. IDNK ENSGALG00000012583 3 1 - - - - - 1.000 - - - - IDNK, gluconokinase [Source:HGNC Symbol;Acc:HGNC:31367]
25. FAM3D ENSGALG00000007152 4 1 - - - - - - - 1.000 - - family with sequence similarity 3 member D [Source:HGNC Symbol;Acc:HGNC:18665]
26. STAR ENSGALG00000003242 4 1 - - 1.000 - - - - - - - steroidogenic acute regulatory protein [Source:NCBI gene;Acc:395421]
27. SLC22A3 ENSGALG00000020002 4 1 - - - - - - 1.000 - - - solute carrier family 22 member 3 [Source:HGNC Symbol;Acc:HGNC:10967]
28. Vault Vault 5 1 - - - - - 1.000 - - - -
29. PROM1L ENSGALG00000007645 9 1 - - - - - 1.000 - - - - prominin 1-like
30. CYP2U1 ENSGALG00000027908 13 1 - - - - - - - 1.000 - - cytochrome P450 family 2 subfamily U member 1 [Source:HGNC Symbol;Acc:HGNC:20582]
31. ENSGALG00000026580 ENSGALG00000026580 4 1 - - - - - - 1.000 - - -
32. HSPB7L ENSGALG00000028183 795 1 - - - - - - 1.000 - - - heat shock protein beta-7-like
33. B3GALT6 ENSGALG00000001859 5 1 - - - - - - 1.000 - - - beta-1,3-galactosyltransferase 6
34. FEM1A ENSGALG00000004168 14 1 - - - - - - 1.000 - - - fem-1 homolog A [Source:HGNC Symbol;Acc:HGNC:16934]
35. ADIPOQ ENSGALG00000005554 3 1 - - - - - - 1.000 - - - adiponectin, C1Q and collagen domain containing [Source:NCBI gene;Acc:404536]
36. TPCN1 ENSGALG00000008357 28 1 - - - - - - 1.000 - - - two pore segment channel 1 [Source:HGNC Symbol;Acc:HGNC:18182]
37. C17orf105 C17orf105 11 1 - - - - - - 1.000 - - -
38. ST8SIA1 ENSGALG00000013211 14 1 - - - - 1.000 - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:NCBI gene;Acc:395860]
39. NEIL2 ENSGALG00000016664 4 1 - - 1.000 - - - - - - - nei like DNA glycosylase 2 [Source:NCBI gene;Acc:422037]
40. MFSD11 ENSGALG00000001777 8 1 - - - - - - - 1.000 - - major facilitator superfamily domain containing 11 [Source:HGNC Symbol;Acc:HGNC:25458]
41. ENSGALG00000021824 ENSGALG00000021824 6 1 - - 1.000 - - - - - - -
42. SLCO4A1 ENSGALG00000005460 109 1 - - - - - - - 1.000 - - solute carrier organic anion transporter family member 4A1 [Source:NCBI gene;Acc:419231]
43. SMIM10 SMIM10 2 1 - - - - - - - 1.000 - -
44. ENSGALG00000027602 ENSGALG00000027602 20 1 - - - - - - 1.000 - - -
45. LYG2 ENSGALG00000016761 7 1 - - 1.000 - - - - - - - lysozyme g2 [Source:NCBI gene;Acc:395708]
46. NTNG1 ENSGALG00000031122 126 1 - - - - - - 1.000 - - - netrin G1 [Source:HGNC Symbol;Acc:HGNC:23319]
47. ACKR4 ENSGALG00000041491 7 1 - - - - - - 1.000 - - - atypical chemokine receptor 4 [Source:HGNC Symbol;Acc:HGNC:1611]
48. STRA8 ENSGALG00000011722 4 1 - - - - - - - 1.000 - - stimulated by retinoic acid 8 [Source:HGNC Symbol;Acc:HGNC:30653]
49. CLOCK ENSGALG00000013793 9 1 - - - - - - 1.000 - - - clock circadian regulator [Source:NCBI gene;Acc:373991]
50. PET112 PET112 38 1 - - - - - - 1.000 - - -
51. ALDH1A1 ENSGALG00000015147 3 1 - - - - - 1.000 - - - - aldehyde dehydrogenase 1 family member A1 [Source:NCBI gene;Acc:395264]
52. ENSGALG00000011926 ENSGALG00000011926 6 1 - - - - - 1.000 - - - -
53. SH3TC2 2 1 - - 1.000 - - - - - - - SH3 domain and tetratricopeptide repeats 2
54. DNTT ENSGALG00000006983 2 1 - - - - - 1.000 - - - - DNA nucleotidylexotransferase [Source:NCBI gene;Acc:396351]
55. GPRIN2 ENSGALG00000002048 17 1 - - - - - 1.000 - - - - G protein regulated inducer of neurite outgrowth 2 [Source:NCBI gene;Acc:395648]
56. ENSGALG00000001552 ENSGALG00000001552 4 1 - - - - - 1.000 - - - -
57. NFATC2 ENSGALG00000007963 15 1 - - 1.000 - - - - - - - nuclear factor of activated T cells 2 [Source:HGNC Symbol;Acc:HGNC:7776]
58. BTBD19 ENSGALG00000028978 20 1 - - - - 1.000 - - - - - BTB domain containing 19 [Source:HGNC Symbol;Acc:HGNC:27145]
59. SNORD93 SNORD93 20 1 - - - - - 1.000 - - - -
60. MID2 ENSGALG00000003860 3 1 - - - - - - 1.000 - - - midline 2 [Source:HGNC Symbol;Acc:HGNC:7096]
61. DSC1 ENSGALG00000015140 16 1 - - - - - - 1.000 - - - desmocollin 1, transcript variant X1
62. DPP10 ENSGALG00000012156 20 1 - - - - - - 1.000 - - - dipeptidyl peptidase like 10 [Source:HGNC Symbol;Acc:HGNC:20823]
63. B3GAT1L ENSGALG00000015075 2 1 - - - - - - - 1.000 - - beta-1,3-glucuronyltransferase 1-like [Source:NCBI gene;Acc:408180]
64. TP63 ENSGALG00000007324 6 1 - - 1.000 - - - - - - - tumor protein p63 [Source:NCBI gene;Acc:374269]
65. SLC26A2 ENSGALG00000001239 3 1 - - - - - - 1.000 - - - solute carrier family 26 member 2 [Source:HGNC Symbol;Acc:HGNC:10994]
66. ENSGALG00000010590 ENSGALG00000010590 6 1 - - 1.000 - - - - - - -
67. VILL ENSGALG00000005763 4 1 - - - - - - - 1.000 - - villin like [Source:HGNC Symbol;Acc:HGNC:30906]
68. TRPV1 ENSGALG00000004649 17 1 - - - - - - 1.000 - - - transient receptor potential cation channel subfamily V member 1 [Source:NCBI gene;Acc:395259]
69. TRIM29 ENSGALG00000042360 34 1 - - - - - 1.000 - - - - tripartite motif containing 29 [Source:HGNC Symbol;Acc:HGNC:17274]
70. DPH1 ENSGALG00000003082 5 1 - - - - - - - 1.000 - - diphthamide biosynthesis 1 [Source:NCBI gene;Acc:417564]
71. ENSGALG00000027210 ENSGALG00000027210 5 1 - - - - - - 1.000 - - -
72. SDCBP2 ENSGALG00000028347 1 1 - - - - - 1.000 - - - - syndecan binding protein 2 [Source:HGNC Symbol;Acc:HGNC:15756]
73. ARNTL ENSGALG00000005378 19 1 - - - - - - 1.000 - - - aryl hydrocarbon receptor nuclear translocator like [Source:NCBI gene;Acc:374115]
74. CDYL2 ENSGALG00000012978 6 1 - - - - - 1.000 - - - - chromodomain Y like 2 [Source:HGNC Symbol;Acc:HGNC:23030]
75. SLC6A5 ENSGALG00000003908 3 1 - - - - - 1.000 - - - - solute carrier family 6 member 5 [Source:HGNC Symbol;Acc:HGNC:11051]
76. TIMP2 ENSGALG00000027070 33 1 - - - - - - - 1.000 - - TIMP metallopeptidase inhibitor 2 [Source:NCBI gene;Acc:374178]
77. FLT4 ENSGALG00000005802 5 1 - - - - - 1.000 - - - - fms related tyrosine kinase 4 [Source:NCBI gene;Acc:395742]
78. gga-mir-1801 ENSGALG00000025241 13 1 - - - - - 1.000 - - - - gga-mir-1801 [Source:miRBase;Acc:MI0007545]
79. ENSGALG00000018356 ENSGALG00000018356 22 1 - - - - - - - 1.000 - -
80. PGAP3 ENSGALG00000022030 87 1 - - - - - - - 1.000 - - post-GPI attachment to proteins 3 [Source:HGNC Symbol;Acc:HGNC:23719]
81. PPP1R36 ENSGALG00000040026 24 1 - - - - - - 1.000 - - - protein phosphatase 1 regulatory subunit 36 [Source:HGNC Symbol;Acc:HGNC:20097]
82. LRRC49 ENSGALG00000004059 29 0.997 - - - - - - - 0.997 - - leucine rich repeat containing 49 [Source:HGNC Symbol;Acc:HGNC:25965]
83. SBF1 ENSGALG00000043178 32 0.997 - - - - - - - 0.997 - - SET binding factor 1, transcript variant X12
84. CLGN ENSGALG00000009826 54 0.991 - - - - 0.991 - - - - - calmegin [Source:HGNC Symbol;Acc:HGNC:2060]
85. EPHA1 ENSGALG00000014687 174 0.989 - - - - - - - - - 0.989 EPH receptor A1 [Source:NCBI gene;Acc:378782]
86. SMYD3 ENSGALG00000010653 14 0.989 - - - - - - - - - 0.989 SET and MYND domain containing 3 [Source:HGNC Symbol;Acc:HGNC:15513]
87. ENSGALG00000015097 ENSGALG00000015097 93 0.988 - - - - 0.988 - - - - -
88. CAMTA1 ENSGALG00000039525 1 0.987 - - - - - - - - - 0.987 calmodulin binding transcription activator 1 [Source:HGNC Symbol;Acc:HGNC:18806]
89. EXOC6B ENSGALG00000016098 3 0.987 - - - - - - - - - 0.987 exocyst complex component 6B [Source:HGNC Symbol;Acc:HGNC:17085]
90. TTC29 ENSGALG00000010009 4 0.987 - - - - - - - - - 0.987 tetratricopeptide repeat domain 29 [Source:HGNC Symbol;Acc:HGNC:29936]
91. ACOT1L ENSGALG00000008752 6 0.987 - - - - - - - - - 0.987 acyl-CoA thioesterase 1-like
92. RS1 ENSGALG00000016523 11 0.987 - - - - - - - - - 0.987 retinoschisin 1 [Source:NCBI gene;Acc:772315]
93. RUFY4 2 0.987 - - - - - - - - - 0.987 RUN and FYVE domain containing 4, transcript variant X5
94. C8B ENSGALG00000010853 21 0.987 - - - - - - - - - 0.987 Gallus gallus complement C8 beta chain (C8B), mRNA. [Source:RefSeq mRNA;Acc:NM_001321543]
95. ENSGALG00000004619 ENSGALG00000004619 3 0.987 - - - - - - - - - 0.987
96. TRIM36 ENSGALG00000008188 1 0.987 - - - - - - - - - 0.987 tripartite motif containing 36 [Source:HGNC Symbol;Acc:HGNC:16280]
97. ENSGALG00000009487 ENSGALG00000009487 1 0.987 - - - - - - - - - 0.987
98. C6orf58 ENSGALG00000045522 2 0.987 - - - - - - - - - 0.987 chromosome 6 open reading frame 58 [Source:HGNC Symbol;Acc:HGNC:20960]
99. ENSGALG00000024286 ENSGALG00000024286 2 0.987 - - - - - - - - - 0.987
100. FOSL2 ENSGALG00000010036 3 0.987 - - - - - - - - - 0.987 FOS like 2, AP-1 transcription factor subunit [Source:NCBI gene;Acc:421416]

There are 376 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA