Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CDH6

Gene Name Gene ID Reads Annotation
CDH6 ENSGALG00000012917 17 cadherin 6 [Source:NCBI gene;Acc:414842]











Genes with expression patterns similar to CDH6

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CDH6 ENSGALG00000012917 17 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 cadherin 6 [Source:NCBI gene;Acc:414842]
2. XKRX ENSGALG00000006637 13 1.844 - - - 0.844 - 1.000 - - - - XK related, X-linked, transcript variant X4
3. ENSGALG00000013079 ENSGALG00000013079 12 1.844 - - 1.000 0.844 - - - - - -
4. ZDHHC3 ENSGALG00000029266 11 1.84 - - 0.976 - - 0.864 - - - - zinc finger DHHC-type containing 3 [Source:HGNC Symbol;Acc:HGNC:18470]
5. P2RY13 ENSGALG00000039432 16 1.783 - - - - - - - 0.851 - 0.932 purinergic receptor P2Y13 [Source:HGNC Symbol;Acc:HGNC:4537]
6. HOMER1 ENSGALG00000014813 19 1.776 - - 0.776 - - - 1.000 - - - homer scaffold protein 1 [Source:HGNC Symbol;Acc:HGNC:17512]
7. UBE4B ENSGALG00000002649 39 1.742 - - 0.742 - - - 1.000 - - - ubiquitination factor E4B [Source:HGNC Symbol;Acc:HGNC:12500]
8. ENSGALG00000015743 ENSGALG00000015743 22 1.718 - - - - - - 0.833 0.885 - -
9. SCG2 ENSGALG00000029819 26 1.716 - - - - - - 0.724 0.992 - - secretogranin II [Source:HGNC Symbol;Acc:HGNC:10575]
10. MUC5B MUC5B 62 1.71 - - - 0.727 - 0.983 - - - -
11. ESR2 ENSGALG00000011801 7 1.702 - - - - - 0.715 - - - 0.987 estrogen receptor 2 [Source:NCBI gene;Acc:395575]
12. GPR146 ENSGALG00000004058 302 1.693 - - - - 0.843 0.850 - - - - G protein-coupled receptor 146 [Source:NCBI gene;Acc:416456]
13. PAFAH2 ENSGALG00000021658 68 1.649 - - 0.721 - - 0.928 - - - - platelet activating factor acetylhydrolase 2 [Source:HGNC Symbol;Acc:HGNC:8579]
14. CRB2 ENSGALG00000001169 23 1.542 - - - - - 0.736 - 0.806 - - crumbs 2, cell polarity complex component [Source:HGNC Symbol;Acc:HGNC:18688]
15. JDP2 ENSGALG00000010322 11 1.541 - - 0.816 0.725 - - - - - - Jun dimerization protein 2 [Source:NCBI gene;Acc:423363]
16. ENSGALG00000028936 ENSGALG00000028936 57 1.509 - - - - - 0.742 - - - 0.767
17. VPS72 ENSGALG00000000793 329 1.484 - - - 0.732 - - - 0.752 - - vacuolar protein sorting 72 homolog [Source:HGNC Symbol;Acc:HGNC:11644]
18. DLX3 ENSGALG00000040529 37 1.432 - - - 0.714 - - - 0.718 - - Gallus gallus distal-less homeobox 3 (DLX3), mRNA. [Source:RefSeq mRNA;Acc:NM_204804]
19. GBP ENSGALG00000026152 38 1.429 - - 0.722 - - - - 0.707 - - Gallus gallus guanylate binding protein (GBP), mRNA. [Source:RefSeq mRNA;Acc:NM_204652]
20. NFATC2 ENSGALG00000007963 15 1 - - 1.000 - - - - - - - nuclear factor of activated T cells 2 [Source:HGNC Symbol;Acc:HGNC:7776]
21. BTBD19 ENSGALG00000028978 20 1 - - - - 1.000 - - - - - BTB domain containing 19 [Source:HGNC Symbol;Acc:HGNC:27145]
22. SNORD93 SNORD93 20 1 - - - - - 1.000 - - - -
23. B3GAT1L ENSGALG00000015075 2 1 - - - - - - - 1.000 - - beta-1,3-glucuronyltransferase 1-like [Source:NCBI gene;Acc:408180]
24. DPP10 ENSGALG00000012156 20 1 - - - - - - 1.000 - - - dipeptidyl peptidase like 10 [Source:HGNC Symbol;Acc:HGNC:20823]
25. MID2 ENSGALG00000003860 3 1 - - - - - - 1.000 - - - midline 2 [Source:HGNC Symbol;Acc:HGNC:7096]
26. DSC1 ENSGALG00000015140 16 1 - - - - - - 1.000 - - - desmocollin 1, transcript variant X1
27. ALDH1A1 ENSGALG00000015147 3 1 - - - - - 1.000 - - - - aldehyde dehydrogenase 1 family member A1 [Source:NCBI gene;Acc:395264]
28. SH3TC2 2 1 - - 1.000 - - - - - - - SH3 domain and tetratricopeptide repeats 2
29. ENSGALG00000011926 ENSGALG00000011926 6 1 - - - - - 1.000 - - - -
30. ENSGALG00000001552 ENSGALG00000001552 4 1 - - - - - 1.000 - - - -
31. GPRIN2 ENSGALG00000002048 17 1 - - - - - 1.000 - - - - G protein regulated inducer of neurite outgrowth 2 [Source:NCBI gene;Acc:395648]
32. DNTT ENSGALG00000006983 2 1 - - - - - 1.000 - - - - DNA nucleotidylexotransferase [Source:NCBI gene;Acc:396351]
33. DPH1 ENSGALG00000003082 5 1 - - - - - - - 1.000 - - diphthamide biosynthesis 1 [Source:NCBI gene;Acc:417564]
34. ENSGALG00000027210 ENSGALG00000027210 5 1 - - - - - - 1.000 - - -
35. ARNTL ENSGALG00000005378 19 1 - - - - - - 1.000 - - - aryl hydrocarbon receptor nuclear translocator like [Source:NCBI gene;Acc:374115]
36. CDYL2 ENSGALG00000012978 6 1 - - - - - 1.000 - - - - chromodomain Y like 2 [Source:HGNC Symbol;Acc:HGNC:23030]
37. SDCBP2 ENSGALG00000028347 1 1 - - - - - 1.000 - - - - syndecan binding protein 2 [Source:HGNC Symbol;Acc:HGNC:15756]
38. TIMP2 ENSGALG00000027070 33 1 - - - - - - - 1.000 - - TIMP metallopeptidase inhibitor 2 [Source:NCBI gene;Acc:374178]
39. gga-mir-1801 ENSGALG00000025241 13 1 - - - - - 1.000 - - - - gga-mir-1801 [Source:miRBase;Acc:MI0007545]
40. FLT4 ENSGALG00000005802 5 1 - - - - - 1.000 - - - - fms related tyrosine kinase 4 [Source:NCBI gene;Acc:395742]
41. SLC6A5 ENSGALG00000003908 3 1 - - - - - 1.000 - - - - solute carrier family 6 member 5 [Source:HGNC Symbol;Acc:HGNC:11051]
42. PPP1R36 ENSGALG00000040026 24 1 - - - - - - 1.000 - - - protein phosphatase 1 regulatory subunit 36 [Source:HGNC Symbol;Acc:HGNC:20097]
43. ENSGALG00000018356 ENSGALG00000018356 22 1 - - - - - - - 1.000 - -
44. PGAP3 ENSGALG00000022030 87 1 - - - - - - - 1.000 - - post-GPI attachment to proteins 3 [Source:HGNC Symbol;Acc:HGNC:23719]
45. TP63 ENSGALG00000007324 6 1 - - 1.000 - - - - - - - tumor protein p63 [Source:NCBI gene;Acc:374269]
46. ENSGALG00000010590 ENSGALG00000010590 6 1 - - 1.000 - - - - - - -
47. SLC26A2 ENSGALG00000001239 3 1 - - - - - - 1.000 - - - solute carrier family 26 member 2 [Source:HGNC Symbol;Acc:HGNC:10994]
48. VILL ENSGALG00000005763 4 1 - - - - - - - 1.000 - - villin like [Source:HGNC Symbol;Acc:HGNC:30906]
49. TRIM29 ENSGALG00000042360 34 1 - - - - - 1.000 - - - - tripartite motif containing 29 [Source:HGNC Symbol;Acc:HGNC:17274]
50. TRPV1 ENSGALG00000004649 17 1 - - - - - - 1.000 - - - transient receptor potential cation channel subfamily V member 1 [Source:NCBI gene;Acc:395259]
51. CYP2U1 ENSGALG00000027908 13 1 - - - - - - - 1.000 - - cytochrome P450 family 2 subfamily U member 1 [Source:HGNC Symbol;Acc:HGNC:20582]
52. PROM1L ENSGALG00000007645 9 1 - - - - - 1.000 - - - - prominin 1-like
53. HSPB7L ENSGALG00000028183 795 1 - - - - - - 1.000 - - - heat shock protein beta-7-like
54. ENSGALG00000026580 ENSGALG00000026580 4 1 - - - - - - 1.000 - - -
55. FEM1A ENSGALG00000004168 14 1 - - - - - - 1.000 - - - fem-1 homolog A [Source:HGNC Symbol;Acc:HGNC:16934]
56. B3GALT6 ENSGALG00000001859 5 1 - - - - - - 1.000 - - - beta-1,3-galactosyltransferase 6
57. ADIPOQ ENSGALG00000005554 3 1 - - - - - - 1.000 - - - adiponectin, C1Q and collagen domain containing [Source:NCBI gene;Acc:404536]
58. GTF3C3 ENSGALG00000007958 6 1 - - - - - - - 1.000 - - general transcription factor IIIC subunit 3 [Source:NCBI gene;Acc:424052]
59. ANKS3 ENSGALG00000000643 2 1 - - - - - - - 1.000 - - ankyrin repeat and sterile alpha motif domain containing 3 [Source:HGNC Symbol;Acc:HGNC:29422]
60. STAR ENSGALG00000003242 4 1 - - 1.000 - - - - - - - steroidogenic acute regulatory protein [Source:NCBI gene;Acc:395421]
61. FAM3D ENSGALG00000007152 4 1 - - - - - - - 1.000 - - family with sequence similarity 3 member D [Source:HGNC Symbol;Acc:HGNC:18665]
62. TG ENSGALG00000039509 19 1 - - - - - - - 1.000 - - thyroglobulin [Source:HGNC Symbol;Acc:HGNC:11764]
63. IDNK ENSGALG00000012583 3 1 - - - - - 1.000 - - - - IDNK, gluconokinase [Source:HGNC Symbol;Acc:HGNC:31367]
64. ENSGALG00000002367 ENSGALG00000002367 10 1 - - 1.000 - - - - - - -
65. Vault Vault 5 1 - - - - - 1.000 - - - -
66. SLC22A3 ENSGALG00000020002 4 1 - - - - - - 1.000 - - - solute carrier family 22 member 3 [Source:HGNC Symbol;Acc:HGNC:10967]
67. LYG2 ENSGALG00000016761 7 1 - - 1.000 - - - - - - - lysozyme g2 [Source:NCBI gene;Acc:395708]
68. ENSGALG00000027602 ENSGALG00000027602 20 1 - - - - - - 1.000 - - -
69. PET112 PET112 38 1 - - - - - - 1.000 - - -
70. CLOCK ENSGALG00000013793 9 1 - - - - - - 1.000 - - - clock circadian regulator [Source:NCBI gene;Acc:373991]
71. NTNG1 ENSGALG00000031122 126 1 - - - - - - 1.000 - - - netrin G1 [Source:HGNC Symbol;Acc:HGNC:23319]
72. STRA8 ENSGALG00000011722 4 1 - - - - - - - 1.000 - - stimulated by retinoic acid 8 [Source:HGNC Symbol;Acc:HGNC:30653]
73. ACKR4 ENSGALG00000041491 7 1 - - - - - - 1.000 - - - atypical chemokine receptor 4 [Source:HGNC Symbol;Acc:HGNC:1611]
74. C17orf105 C17orf105 11 1 - - - - - - 1.000 - - -
75. TPCN1 ENSGALG00000008357 28 1 - - - - - - 1.000 - - - two pore segment channel 1 [Source:HGNC Symbol;Acc:HGNC:18182]
76. ST8SIA1 ENSGALG00000013211 14 1 - - - - 1.000 - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:NCBI gene;Acc:395860]
77. MFSD11 ENSGALG00000001777 8 1 - - - - - - - 1.000 - - major facilitator superfamily domain containing 11 [Source:HGNC Symbol;Acc:HGNC:25458]
78. NEIL2 ENSGALG00000016664 4 1 - - 1.000 - - - - - - - nei like DNA glycosylase 2 [Source:NCBI gene;Acc:422037]
79. SMIM10 SMIM10 2 1 - - - - - - - 1.000 - -
80. SLCO4A1 ENSGALG00000005460 109 1 - - - - - - - 1.000 - - solute carrier organic anion transporter family member 4A1 [Source:NCBI gene;Acc:419231]
81. ENSGALG00000021824 ENSGALG00000021824 6 1 - - 1.000 - - - - - - -
82. SBF1 ENSGALG00000043178 32 0.997 - - - - - - - 0.997 - - SET binding factor 1, transcript variant X12
83. LRRC49 ENSGALG00000004059 29 0.997 - - - - - - - 0.997 - - leucine rich repeat containing 49 [Source:HGNC Symbol;Acc:HGNC:25965]
84. CLGN ENSGALG00000009826 54 0.991 - - - - 0.991 - - - - - calmegin [Source:HGNC Symbol;Acc:HGNC:2060]
85. SMYD3 ENSGALG00000010653 14 0.989 - - - - - - - - - 0.989 SET and MYND domain containing 3 [Source:HGNC Symbol;Acc:HGNC:15513]
86. EPHA1 ENSGALG00000014687 174 0.989 - - - - - - - - - 0.989 EPH receptor A1 [Source:NCBI gene;Acc:378782]
87. ENSGALG00000015097 ENSGALG00000015097 93 0.988 - - - - 0.988 - - - - -
88. NT5E ENSGALG00000015833 5 0.987 - - - - - - - - - 0.987 5'-nucleotidase ecto
89. RBL2 ENSGALG00000003663 10 0.987 - - - - - - - - - 0.987 RB transcriptional corepressor like 2 [Source:NCBI gene;Acc:425111]
90. DAPK1 ENSGALG00000012608 17 0.987 - - - - - - - - - 0.987 death-associated protein kinase 1 [Source:NCBI gene;Acc:431670]
91. LRRN3 ENSGALG00000009488 1 0.987 - - - - - - - - - 0.987 leucine rich repeat neuronal 3 [Source:HGNC Symbol;Acc:HGNC:17200]
92. RAB9B ENSGALG00000004918 2 0.987 - - - - - - - - - 0.987 RAB9B, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:14090]
93. WNT7A ENSGALG00000005123 2 0.987 - - - - - - - - - 0.987 Wnt family member 7A [Source:NCBI gene;Acc:374168]
94. MST MST 9 0.987 - - - - - - - - - 0.987
95. SNORA77 SNORA77 5 0.987 - - - - - - - - - 0.987
96. NUDT3 ENSGALG00000002830 7 0.987 - - - - - - - - - 0.987 nudix hydrolase 3 [Source:NCBI gene;Acc:419905]
97. GRAMD2 GRAMD2 3 0.987 - - - - - - - - - 0.987
98. gga-mir-22 ENSGALG00000024507 2 0.987 - - - - - - - - - 0.987 gga-mir-22 [Source:miRBase;Acc:MI0006982]
99. SNX13 ENSGALG00000010840 13 0.987 - - - - - - - - - 0.987 sorting nexin 13 [Source:NCBI gene;Acc:420598]
100. POLR3G ENSGALG00000014650 7 0.987 - - - - - - - - - 0.987 RNA polymerase III subunit G, transcript variant X2

There are 376 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA