Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CDH5

Gene Name Gene ID Reads Annotation
CDH5 ENSGALG00000032349 8526 cadherin 5 [Source:NCBI gene;Acc:374068]











Genes with expression patterns similar to CDH5

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CDH5 ENSGALG00000032349 8526 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cadherin 5 [Source:NCBI gene;Acc:374068]
2. RAMP2 ENSGALG00000024449 5860 2.476 - - - 0.809 0.817 - - - - 0.850 receptor activity modifying protein 2 [Source:NCBI gene;Acc:420022]
3. FBXO5 ENSGALG00000013607 6156 1.761 - - - - - - - 0.968 - 0.793 F-box protein 5 [Source:HGNC Symbol;Acc:HGNC:13584]
4. PSMA3 ENSGALG00000012039 26539 1.72 - - - - - - 0.995 - - 0.725 proteasome subunit alpha 3 [Source:NCBI gene;Acc:423542]
5. SPARC ENSGALG00000004184 36410 1.671 - - - - 0.753 - - 0.918 - - secreted protein acidic and cysteine rich [Source:NCBI gene;Acc:386571]
6. CTSO ENSGALG00000009373 4186 1.66 - - - - - - - 0.805 - 0.855 cathepsin O [Source:NCBI gene;Acc:422410]
7. HDAC2 ENSGALG00000014991 23458 1.634 - - - - - - - 0.882 - 0.752 histone deacetylase 2 [Source:NCBI gene;Acc:395635]
8. TMEM115 ENSGALG00000026965 13050 1.518 - - - - - - - 0.813 - 0.705 transmembrane protein 115 [Source:HGNC Symbol;Acc:HGNC:30055]
9. ENSGALG00000028992 ENSGALG00000028992 185077 1.507 - - - - - - - 0.750 - 0.757
10. HAPLN1 ENSGALG00000015627 14942 1.437 - - - - 0.731 - - - - 0.706 hyaluronan and proteoglycan link protein 1 [Source:NCBI gene;Acc:396475]
11. REPS1 ENSGALG00000013829 2271 0.999 - - - - - - 0.999 - - - RALBP1 associated Eps domain containing 1 [Source:NCBI gene;Acc:421678]
12. CENPL ENSGALG00000038411 4867 0.999 - - - - - - 0.999 - - - centromere protein L [Source:NCBI gene;Acc:426563]
13. NEIL1 ENSGALG00000001586 2292 0.999 - - - - - - 0.999 - - - nei like DNA glycosylase 1 [Source:NCBI gene;Acc:770068]
14. HDHD2 ENSGALG00000034801 6373 0.999 - - - - - - 0.999 - - - haloacid dehalogenase like hydrolase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25364]
15. MKKS ENSGALG00000009013 9301 0.999 - - - - - - 0.999 - - - McKusick-Kaufman syndrome [Source:NCBI gene;Acc:416737]
16. WRN ENSGALG00000040909 3645 0.999 - - - - - - 0.999 - - - Werner syndrome RecQ like helicase [Source:NCBI gene;Acc:422505]
17. TAF13 ENSGALG00000015185 11410 0.999 - - - - - - 0.999 - - - TATA-box binding protein associated factor 13 [Source:NCBI gene;Acc:418365]
18. DOHH ENSGALG00000017524 9420 0.999 - - - - - - 0.999 - - - deoxyhypusine hydroxylase [Source:NCBI gene;Acc:427066]
19. GMPS ENSGALG00000010284 8765 0.999 - - - - - - 0.999 - - - guanine monophosphate synthase [Source:NCBI gene;Acc:425028]
20. FANCE ENSGALG00000002561 3532 0.999 - - - - - - 0.999 - - - Fanconi anemia complementation group E
21. SAMHD1 ENSGALG00000001231 5218 0.999 - - - - - - 0.999 - - - SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 [Source:NCBI gene;Acc:419125]
22. MED10 ENSGALG00000028336 9343 0.999 - - - - - - 0.999 - - - mediator complex subunit 10 [Source:HGNC Symbol;Acc:HGNC:28760]
23. CARHSP1 ENSGALG00000042981 6920 0.999 - - - - - - 0.999 - - - calcium regulated heat stable protein 1 [Source:HGNC Symbol;Acc:HGNC:17150]
24. TNNI1 ENSGALG00000000313 4069 0.999 - - - - - - 0.999 - - - troponin I1, slow skeletal type [Source:HGNC Symbol;Acc:HGNC:11945]
25. HAUS6 ENSGALG00000015091 9671 0.999 - - - - - - 0.999 - - - HAUS augmin like complex subunit 6 [Source:NCBI gene;Acc:427238]
26. MRPS25 ENSGALG00000008506 12131 0.999 - - - - - - 0.999 - - - mitochondrial ribosomal protein S25 [Source:NCBI gene;Acc:416129]
27. SEC13 ENSGALG00000008419 18388 0.999 - - - - - - 0.999 - - - SEC13 homolog, nuclear pore and COPII coat complex component [Source:NCBI gene;Acc:416119]
28. NUP214 ENSGALG00000041111 4902 0.999 - - - - - - 0.999 - - - nucleoporin 214 [Source:HGNC Symbol;Acc:HGNC:8064]
29. WDR1 ENSGALG00000014957 15700 0.999 - - - - - - 0.999 - - - WD repeat domain 1 [Source:NCBI gene;Acc:422842]
30. CDCA3 ENSGALG00000014513 17047 0.998 - - - - - - 0.998 - - - cell division cycle associated 3 [Source:NCBI gene;Acc:770517]
31. UBP1 ENSGALG00000035630 13359 0.997 - - - - - - 0.997 - - - upstream binding protein 1 [Source:HGNC Symbol;Acc:HGNC:12507]
32. MRPL51 ENSGALG00000014435 29348 0.997 - - - - - - 0.997 - - - mitochondrial ribosomal protein L51 [Source:NCBI gene;Acc:418274]
33. SDOS SDOS 66125 0.993 - - - - - - 0.993 - - -
34. ARPC3 ENSGALG00000003820 29128 0.993 - - - - - - 0.993 - - - actin related protein 2/3 complex subunit 3 [Source:NCBI gene;Acc:416837]
35. DDT ENSGALG00000006350 16117 0.99 - - - - - - 0.990 - - - D-dopachrome tautomerase [Source:NCBI gene;Acc:416937]
36. GLCCI1 ENSGALG00000035239 22149 0.989 - - - - - - 0.989 - - - glucocorticoid induced 1 [Source:NCBI gene;Acc:420580]
37. ESF1 ENSGALG00000034768 8610 0.982 - - - - - - - 0.982 - - ESF1 nucleolar pre-rRNA processing protein homolog [Source:NCBI gene;Acc:428551]
38. NUDC ENSGALG00000000895 17844 0.98 - - - - - - - 0.980 - - nuclear distribution C, dynein complex regulator [Source:NCBI gene;Acc:419578]
39. TNRC18 ENSGALG00000040770 4061 0.978 - - - - - - - 0.978 - - trinucleotide repeat containing 18 [Source:HGNC Symbol;Acc:HGNC:11962]
40. CCNYL1 ENSGALG00000008485 11958 0.976 - - - - - - - 0.976 - - cyclin Y like 1
41. DAK DAK 13208 0.975 - - - - - - - 0.975 - -
42. CASC4 ENSGALG00000008208 8338 0.973 - - - - - - - 0.973 - - cancer susceptibility 4 [Source:NCBI gene;Acc:415575]
43. HIGD2A ENSGALG00000003348 34109 0.973 - - - - - - - 0.973 - - HIG1 hypoxia inducible domain family member 2A
44. BAG2 ENSGALG00000026605 3898 0.973 - - - - - - - 0.973 - - BCL2 associated athanogene 2
45. TBC1D12 ENSGALG00000034044 5588 0.972 - - - - - - - 0.972 - - TBC1 domain family member 12 [Source:HGNC Symbol;Acc:HGNC:29082]
46. KDM2B ENSGALG00000004225 11513 0.971 - - - - - - - 0.971 - - lysine demethylase 2B [Source:HGNC Symbol;Acc:HGNC:13610]
47. PSMG1 ENSGALG00000016062 7511 0.971 - - - - - - - 0.971 - - proteasome assembly chaperone 1 [Source:NCBI gene;Acc:418520]
48. JMJD1C ENSGALG00000002942 4556 0.971 - - - - - - - 0.971 - - jumonji domain containing 1C [Source:NCBI gene;Acc:423655]
49. CTPS1 ENSGALG00000042967 9532 0.969 - - - - - - - 0.969 - - CTP synthase 1 [Source:HGNC Symbol;Acc:HGNC:2519]
50. NOP14 ENSGALG00000015649 7039 0.968 - - - - - - - 0.968 - - NOP14 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:16821]
51. DISP1 3281 0.968 - - - - - - - 0.968 - - dispatched RND transporter family member 1, transcript variant X3
52. PARP16 ENSGALG00000007365 9467 0.968 - - - - - - - 0.968 - - poly(ADP-ribose) polymerase family member 16 [Source:HGNC Symbol;Acc:HGNC:26040]
53. FKBP9 ENSGALG00000037669 12079 0.967 - - - - - - - 0.967 - - FK506 binding protein 9 [Source:NCBI gene;Acc:395652]
54. LSM1 ENSGALG00000003245 4701 0.967 - - - - - - - 0.967 - - LSM1 homolog, mRNA degradation associated [Source:HGNC Symbol;Acc:HGNC:20472]
55. PRMT7 ENSGALG00000038865 2666 0.966 - - - - - - - 0.966 - - protein arginine methyltransferase 7 [Source:NCBI gene;Acc:415620]
56. MTMR6 ENSGALG00000017112 2214 0.966 - - - - - - - 0.966 - - myotubularin related protein 6 [Source:HGNC Symbol;Acc:HGNC:7453]
57. GPR89 GPR89 2253 0.966 - - - - - - - 0.966 - -
58. MBTPS1 ENSGALG00000003293 4843 0.966 - - - - - - - 0.966 - - membrane bound transcription factor peptidase, site 1 [Source:HGNC Symbol;Acc:HGNC:15456]
59. EXTL3 ENSGALG00000016630 1916 0.965 - - - - - - - 0.965 - - exostosin like glycosyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:3518]
60. SAFB ENSGALG00000013365 3175 0.965 - - - - - - - 0.965 - - scaffold attachment factor B, transcript variant X1
61. LARP1B ENSGALG00000010207 2935 0.965 - - - - - - - 0.965 - - La ribonucleoprotein domain family member 1B [Source:HGNC Symbol;Acc:HGNC:24704]
62. ORC2 ENSGALG00000008234 3361 0.965 - - - - - - - 0.965 - - origin recognition complex subunit 2 [Source:NCBI gene;Acc:424077]
63. Sep-11 Sep-11 2005 0.964 - - - - - - - 0.964 - -
64. ADAM9 ENSGALG00000003398 1299 0.964 - - - - - - - 0.964 - - ADAM metallopeptidase domain 9 [Source:NCBI gene;Acc:426781]
65. PSMD5 ENSGALG00000001637 6812 0.964 - - - - - - - 0.964 - - proteasome 26S subunit, non-ATPase 5 [Source:NCBI gene;Acc:417125]
66. RPTOR ENSGALG00000034210 982 0.963 - - - - - - - 0.963 - - regulatory associated protein of MTOR complex 1 [Source:HGNC Symbol;Acc:HGNC:30287]
67. DDX55 ENSGALG00000003298 2315 0.963 - - - - - - - 0.963 - - DEAD-box helicase 55 [Source:NCBI gene;Acc:416820]
68. ENGASE ENSGALG00000011816 1763 0.963 - - - - - - - 0.963 - - endo-beta-N-acetylglucosaminidase [Source:HGNC Symbol;Acc:HGNC:24622]
69. GOLGA2 ENSGALG00000004881 677 0.963 - - - - - - - 0.963 - - golgin A2, transcript variant X7
70. ACO1 ENSGALG00000002162 6645 0.961 - - - - - - - 0.961 - - aconitase 1, soluble [Source:NCBI gene;Acc:373916]
71. BCCIP ENSGALG00000006617 13291 0.957 - - - - - - - 0.957 - - BRCA2 and CDKN1A interacting protein [Source:HGNC Symbol;Acc:HGNC:978]
72. MCM5 ENSGALG00000012546 18254 0.949 - - - - - - - 0.949 - - minichromosome maintenance complex component 5 [Source:NCBI gene;Acc:418058]
73. CCT6 CCT6 65150 0.949 - - - - - - 0.949 - - -
74. CTNND2 ENSGALG00000013001 11217 0.944 - - - - - - - 0.944 - - catenin delta 2 [Source:HGNC Symbol;Acc:HGNC:2516]
75. SRSF6 ENSGALG00000000990 12424 0.942 - - - - - - - 0.942 - - serine and arginine rich splicing factor 6 [Source:NCBI gene;Acc:419116]
76. SH3BGRL3 ENSGALG00000038536 18187 0.938 - - - - - - - 0.938 - - SH3 domain binding glutamate rich protein like 3 [Source:NCBI gene;Acc:768795]
77. DTD1 ENSGALG00000008808 10807 0.931 - - - - - - - 0.931 - - D-tyrosyl-tRNA deacylase 1 [Source:NCBI gene;Acc:416726]
78. THOC5 ENSGALG00000029223 16069 0.926 - - - - - - - 0.926 - - THO complex 5 [Source:NCBI gene;Acc:417019]
79. SKP2 ENSGALG00000003547 14637 0.924 - - - - - - - 0.924 - - S-phase kinase associated protein 2 [Source:NCBI gene;Acc:427437]
80. TTC4 10377 0.913 - - - - - - - 0.913 - - tetratricopeptide repeat domain 4
81. EIF2B1 ENSGALG00000003259 9491 0.909 - - - - - - - 0.909 - - eukaryotic translation initiation factor 2B subunit alpha [Source:HGNC Symbol;Acc:HGNC:3257]
82. FAM120A ENSGALG00000039316 28650 0.905 - - - - - - 0.905 - - - family with sequence similarity 120A, transcript variant X1
83. PARL ENSGALG00000002315 15943 0.9 - - - - - - - 0.900 - - presenilin associated rhomboid like
84. LSM7 ENSGALG00000000408 19112 0.892 - - - - - - - 0.892 - - LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420055]
85. TM9SF3 ENSGALG00000005534 15290 0.891 - - - - - - - 0.891 - - transmembrane 9 superfamily member 3
86. ATP1A1 ENSGALG00000032247 15898 0.89 - - - - - - - 0.890 - - ATPase Na+/K+ transporting subunit alpha 1 [Source:NCBI gene;Acc:396530]
87. TAF3 ENSGALG00000006731 15569 0.889 - - - - - - - 0.889 - - TATA-box binding protein associated factor 3 [Source:NCBI gene;Acc:419107]
88. CCNA2 ENSGALG00000011881 2574 0.889 - - - - - - - - - 0.889 cyclin A2 [Source:NCBI gene;Acc:396172]
89. ASPM ENSGALG00000032398 12784 0.878 - - - - - - 0.878 - - - abnormal spindle microtubule assembly [Source:HGNC Symbol;Acc:HGNC:19048]
90. VWF ENSGALG00000017272 1012 0.878 - - - - - - - - - 0.878 Gallus gallus von Willebrand factor (VWF), mRNA. [Source:RefSeq mRNA;Acc:NM_001318464]
91. N4BP2 ENSGALG00000014281 3144 0.877 - - - - - - - - - 0.877 NEDD4 binding protein 2, transcript variant X6
92. ERCC6 ENSGALG00000006254 3452 0.876 - - - - - - - - - 0.876 ERCC excision repair 6, chromatin remodeling factor [Source:HGNC Symbol;Acc:HGNC:3438]
93. 5 5 4209 0.874 - - - - - - - - - 0.874
94. COPS5 ENSGALG00000030843 11942 0.873 - - - - - - - 0.873 - - COP9 signalosome subunit 5 [Source:NCBI gene;Acc:426579]
95. SPDL1 ENSGALG00000001942 4403 0.872 - - - - - - - - - 0.872 spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
96. FANCL ENSGALG00000030022 7423 0.869 - - - - - - - - - 0.869 FA complementation group L [Source:NCBI gene;Acc:421202]
97. CRCP ENSGALG00000002587 8809 0.867 - - - - - - - - - 0.867 CGRP receptor component [Source:NCBI gene;Acc:396022]
98. GSTAL2 ENSGALG00000028551 4899 0.866 - - - - - - - - - 0.866 glutathione S-transferase alpha-like 2, transcript variant X4
99. RNF7 ENSGALG00000021117 13110 0.866 - - - - - - - 0.866 - - ring finger protein 7 [Source:NCBI gene;Acc:424781]
100. MAN2A1 ENSGALG00000000255 4543 0.862 - - - - - - - - - 0.862 mannosidase alpha class 2A member 1 [Source:HGNC Symbol;Acc:HGNC:6824]

There are 380 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA