Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CDH23

Gene Name Gene ID Reads Annotation
CDH23 ENSGALG00000004653, ENSGALG00000036824 2 cadherin related 23, transcript variant X17











Genes with expression patterns similar to CDH23

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CDH23 ENSGALG00000004653, ENSGALG00000036824 2 2 - - - 1.000 - - - 1.000 - - cadherin related 23, transcript variant X17
2. ABCA9 ENSGALG00000021395 5 1 - - - - - - - 1.000 - - ATP binding cassette subfamily A member 9
3. PRKG2 ENSGALG00000010909 1 1 - - - - - - - 1.000 - - protein kinase cGMP-dependent 2 [Source:HGNC Symbol;Acc:HGNC:9416]
4. FES ENSGALG00000008340 223 1 - - - - - - - 1.000 - - FES proto-oncogene, tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:3657]
5. ZAP70 ENSGALG00000001486 2 1 - - - - - - - 1.000 - - Gallus gallus zeta-chain (TCR) associated protein kinase 70kDa (ZAP70), mRNA. [Source:RefSeq mRNA;Acc:NM_001321556]
6. ENSGALG00000022857 ENSGALG00000022857 4 1 - - - 1.000 - - - - - -
7. LECT2 ENSGALG00000006323 60 1 - - - - - - - 1.000 - - leukocyte cell derived chemotaxin 2 [Source:NCBI gene;Acc:396471]
8. EDRF1 26 1 - - - - - - - 1.000 - - erythroid differentiation regulatory factor 1
9. GNRH1 9 1 - - - - - - - 1.000 - - gonadotropin releasing hormone 1
10. SVOP ENSGALG00000034278 27 1 - - - - - - - 1.000 - - SV2 related protein [Source:HGNC Symbol;Acc:HGNC:25417]
11. MDGA1 ENSGALG00000010145 13 1 - - - - - - - 1.000 - - MAM domain containing glycosylphosphatidylinositol anchor 1 [Source:NCBI gene;Acc:421431]
12. MC5R ENSGALG00000032087 2 1 - - - - - - - 1.000 - - melanocortin 5 receptor [Source:NCBI gene;Acc:421047]
13. H2AFX ENSGALG00000045705 7 1 - - - 1.000 - - - - - - H2A histone family member X
14. MMP11 ENSGALG00000005968 3 1 - - - 1.000 - - - - - - matrix metallopeptidase 11 [Source:HGNC Symbol;Acc:HGNC:7157]
15. VILL ENSGALG00000005763 4 1 - - - 1.000 - - - - - - villin like [Source:HGNC Symbol;Acc:HGNC:30906]
16. KIAA1024L ENSGALG00000027692 20 1 - - - - - - - 1.000 - - KIAA1024 like [Source:HGNC Symbol;Acc:HGNC:33914]
17. MTHFD2L ENSGALG00000010855 14 1 - - - - - - - 1.000 - - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like [Source:HGNC Symbol;Acc:HGNC:31865]
18. AMBP ENSGALG00000030255 18 1 - - - - - - - 1.000 - - alpha-1-microglobulin/bikunin precursor [Source:NCBI gene;Acc:770795]
19. CRYBG3 7 1 - - - - - - - 1.000 - - crystallin beta-gamma domain containing 3, transcript variant X2
20. STON1 ENSGALG00000009092 49 1 - - - - - - - 1.000 - - stonin 1 [Source:NCBI gene;Acc:100534590]
21. C1orf43 C1orf43 100 1 - - - - - - - 1.000 - -
22. CACNA1D ENSGALG00000005332 34 1 - - - - - - - 1.000 - - calcium voltage-gated channel subunit alpha1 D [Source:NCBI gene;Acc:395895]
23. SMYD3 ENSGALG00000010653 14 1 - - - - - - - 1.000 - - SET and MYND domain containing 3 [Source:HGNC Symbol;Acc:HGNC:15513]
24. MCF2L2 ENSGALG00000008744 8 1 - - - - - - - 1.000 - - MCF.2 cell line derived transforming sequence-like 2 [Source:HGNC Symbol;Acc:HGNC:30319]
25. FAM237A ENSGALG00000020836 21 1 - - - - - - - 1.000 - - family with sequence similarity 237 member A [Source:HGNC Symbol;Acc:HGNC:52388]
26. SERHL2 ENSGALG00000011867 2 1 - - - - - - - 1.000 - - serine hydrolase like 2 [Source:NCBI gene;Acc:417976]
27. PAQR7 ENSGALG00000009680 10 1 - - - - - - - 1.000 - - progestin and adipoQ receptor family member 7 [Source:NCBI gene;Acc:425505]
28. PRPF19 ENSGALG00000040048 168 1 - - - - - - - 1.000 - - pre-mRNA processing factor 19 [Source:NCBI gene;Acc:430767]
29. TRAPPC9 ENSGALG00000042766 10 1 - - - - - - - 1.000 - - trafficking protein particle complex 9 [Source:HGNC Symbol;Acc:HGNC:30832]
30. ENSGALG00000009777 ENSGALG00000009777 3 1 - - - 1.000 - - - - - -
31. CASKIN2 ENSGALG00000008034 3 1 - - - - - - - 1.000 - - CASK interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:18200]
32. ICK ENSGALG00000016321 19 1 - - - - - - - 1.000 - - intestinal cell kinase [Source:HGNC Symbol;Acc:HGNC:21219]
33. CTSE ENSGALG00000000786 1 1 - - - - - - - 1.000 - - cathepsin E [Source:HGNC Symbol;Acc:HGNC:2530]
34. CCKBR ENSGALG00000039837 23 1 - - - - - - - 1.000 - - cholecystokinin B receptor [Source:NCBI gene;Acc:414885]
35. ANPEP ENSGALG00000027501 234 1 - - - - - - - 1.000 - - alanyl aminopeptidase, membrane [Source:NCBI gene;Acc:395667]
36. MAP3K15 ENSGALG00000016426 1 1 - - - - - - - 1.000 - - mitogen-activated protein kinase kinase kinase 15 [Source:HGNC Symbol;Acc:HGNC:31689]
37. BST1 ENSGALG00000014509 12 1 - - - - - - - 1.000 - - bone marrow stromal cell antigen 1 [Source:NCBI gene;Acc:422828]
38. GPR34 ENSGALG00000016227 9 1 - - - - - - - 1.000 - - G protein-coupled receptor 34 [Source:NCBI gene;Acc:771199]
39. CD8B ENSGALG00000015902 3 1 - - - - - - - 1.000 - - CD8b molecule [Source:NCBI gene;Acc:396175]
40. PEPCK PEPCK 1 1 - - - - - - - 1.000 - -
41. UBE3C ENSGALG00000006461 57 1 - - - 1.000 - - - - - - ubiquitin protein ligase E3C [Source:NCBI gene;Acc:420447]
42. C1ORF95 C1ORF95 0 1 - - - - - - - 1.000 - -
43. FAM73A FAM73A 7 1 - - - - - - - 1.000 - -
44. KIAA1841 ENSGALG00000007825 22 1 - - - - - - - 1.000 - - KIAA1841 [Source:NCBI gene;Acc:421196]
45. CLDN3 ENSGALG00000022557 189 1 - - - - - - - 1.000 - - claudin 3 [Source:NCBI gene;Acc:374029]
46. GRHL2 ENSGALG00000037687 3 1 - - - - - - - 1.000 - - grainyhead like transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:2799]
47. LOC425001 ENSGALG00000009468 7 1 - - - - - - - 1.000 - - uncharacterized LOC425001, transcript variant X2
48. FREM1 ENSGALG00000005426 61 1 - - - - - - - 1.000 - - FRAS1 related extracellular matrix 1 [Source:HGNC Symbol;Acc:HGNC:23399]
49. TTC39B ENSGALG00000005416 12 1 - - - - - - - 1.000 - - tetratricopeptide repeat domain 39B [Source:HGNC Symbol;Acc:HGNC:23704]
50. TBXAS1 ENSGALG00000012791 2 1 - - - - - - - 1.000 - - thromboxane A synthase 1 [Source:HGNC Symbol;Acc:HGNC:11609]
51. SKIV2L ENSGALG00000035499 45 1 - - - - - - - 1.000 - - Ski2 like RNA helicase [Source:HGNC Symbol;Acc:HGNC:10898]
52. SLC35F4 ENSGALG00000012094 30 1 - - - - - - - 1.000 - - solute carrier family 35 member F4 [Source:HGNC Symbol;Acc:HGNC:19845]
53. MADCAM1 ENSGALG00000028341 6 1 - - - - - - - 1.000 - - mucosal vascular addressin cell adhesion molecule 1
54. ANO2 ENSGALG00000017271 4 1 - - - - - - - 1.000 - - anoctamin 2 [Source:HGNC Symbol;Acc:HGNC:1183]
55. SEZ6L ENSGALG00000032415 56 1 - - - - - - - 1.000 - - seizure related 6 homolog like [Source:HGNC Symbol;Acc:HGNC:10763]
56. CMTR1 ENSGALG00000010149 12 1 - - - 1.000 - - - - - - cap methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:21077]
57. HGFAC ENSGALG00000015623 1 0.996 - - - - - - - 0.996 - - HGF activator [Source:HGNC Symbol;Acc:HGNC:4894]
58. CCNI2 ENSGALG00000023812 21 0.984 - - - - - - - 0.984 - - cyclin I family member 2, transcript variant X2
59. MYO10L ENSGALG00000011172 80 0.984 - - - - - - - 0.984 - - myosin-X-like, transcript variant X2
60. CD28 ENSGALG00000008669 2 0.984 - - - - - - - 0.984 - - CD28 molecule [Source:NCBI gene;Acc:396249]
61. RTKN2 ENSGALG00000002980 50 0.984 - - - - - - - 0.984 - - rhotekin 2 [Source:NCBI gene;Acc:423660]
62. ZNF512B ENSGALG00000006013 100 0.984 - - - - - - - 0.984 - - zinc finger protein 512B [Source:NCBI gene;Acc:771616]
63. RQCD1 RQCD1 110 0.984 - - - - - - - 0.984 - -
64. ENSGALG00000022901 ENSGALG00000022901 19 0.984 - - - - - - - 0.984 - -
65. TPCN1 ENSGALG00000008357 28 0.984 - - - - - - - 0.984 - - two pore segment channel 1 [Source:HGNC Symbol;Acc:HGNC:18182]
66. IDO2 ENSGALG00000024085 2 0.98 - - - 0.980 - - - - - - indoleamine 2,3-dioxygenase 2
67. DKK-1 DKK-1 146 0.98 - - - 0.980 - - - - - -
68. PPCDC ENSGALG00000001711 131 0.967 - - - 0.967 - - - - - - phosphopantothenoylcysteine decarboxylase [Source:HGNC Symbol;Acc:HGNC:28107]
69. RNF25 ENSGALG00000011375 51 0.935 - - - - - - - 0.935 - - ring finger protein 25 [Source:NCBI gene;Acc:424211]
70. ZBTB46 ENSGALG00000006062 133 0.935 - - - - - - - 0.935 - - zinc finger and BTB domain containing 46 [Source:HGNC Symbol;Acc:HGNC:16094]
71. NDFIP2 ENSGALG00000016909 25 0.926 - - - - - - - 0.926 - - Nedd4 family interacting protein 2 [Source:NCBI gene;Acc:418803]
72. COL21A1 ENSGALG00000016292 35 0.895 - - - - - - - 0.895 - - collagen type XXI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:17025]
73. BF1 ENSGALG00000033932 18 0.889 - - - 0.889 - - - - - - MHC BF1 class I [Source:NCBI gene;Acc:693260]
74. PLIN3 ENSGALG00000044632 370 0.87 - - - 0.870 - - - - - - perilipin 3, transcript variant X2
75. PTH1R ENSGALG00000005476 15 0.847 - - - - - - - 0.847 - - parathyroid hormone 1 receptor [Source:NCBI gene;Acc:420401]
76. ERMN ENSGALG00000020575 46 0.847 - - - - - - - 0.847 - - ermin [Source:HGNC Symbol;Acc:HGNC:29208]
77. BTBD3 ENSGALG00000009028 45 0.843 - - - - - - - 0.843 - - BTB domain containing 3 [Source:HGNC Symbol;Acc:HGNC:15854]
78. CKV6.3 CKV6.3 13 0.841 - - - - - - - 0.841 - -
79. UTS2D UTS2D 2246 0.83 - - - - - - - 0.830 - -
80. GABRA2 ENSGALG00000014206 19 0.818 - - - 0.818 - - - - - - gamma-aminobutyric acid type A receptor alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:4076]
81. SPATA6 ENSGALG00000010502 16 0.812 - - - - - - - 0.812 - - spermatogenesis associated 6 [Source:HGNC Symbol;Acc:HGNC:18309]
82. ENSGALG00000013751 ENSGALG00000013751 26 0.812 - - - - - - - 0.812 - -
83. PLCD4 ENSGALG00000026687 24 0.812 - - - - - - - 0.812 - - phospholipase C delta 4 [Source:HGNC Symbol;Acc:HGNC:9062]
84. MYBL1 ENSGALG00000033304 29 0.812 - - - - - - - 0.812 - - MYB proto-oncogene like 1 [Source:NCBI gene;Acc:396158]
85. TMEM200B ENSGALG00000024318 117 0.806 - - - - - - - 0.806 - - transmembrane protein 200B [Source:HGNC Symbol;Acc:HGNC:33785]
86. ABCC3 ENSGALG00000007522 340 0.804 - - - - - - - 0.804 - - ATP binding cassette subfamily C member 3, transcript variant X5
87. DNAH5 ENSGALG00000012997 28 0.802 - - - 0.802 - - - - - - dynein axonemal heavy chain 5 [Source:HGNC Symbol;Acc:HGNC:2950]
88. PSEN2 ENSGALG00000009073 7 0.794 - - - 0.794 - - - - - - presenilin 2 (Alzheimer disease 4) [Source:NCBI gene;Acc:374188]
89. ENSGALG00000001478 ENSGALG00000001478 23 0.777 - - - - - - - 0.777 - -
90. GAB3 ENSGALG00000008408 19 0.775 - - - 0.775 - - - - - - GRB2 associated binding protein 3 [Source:HGNC Symbol;Acc:HGNC:17515]
91. RNF216 ENSGALG00000004629 84 0.77 - - - - - - - 0.770 - - ring finger protein 216 [Source:HGNC Symbol;Acc:HGNC:21698]
92. RC3H2 ENSGALG00000001253 18 0.77 - - - - - - - 0.770 - - ring finger and CCCH-type domains 2 [Source:HGNC Symbol;Acc:HGNC:21461]
93. KIAA0247 KIAA0247 10 0.768 - - - 0.768 - - - - - -
94. LOC422147 ENSGALG00000004113 30 0.764 - - - - - - - 0.764 - - putative P2Y purinoceptor 10-like
95. OVST_1 ENSGALG00000011930 9 0.761 - - - - - - - 0.761 - - ovostatin [Source:NCBI gene;Acc:396151]
96. TCTE3 ENSGALG00000011189 106 0.758 - - - 0.758 - - - - - - t-complex-associated-testis-expressed 3 [Source:HGNC Symbol;Acc:HGNC:11695]
97. ITGAV ENSGALG00000002655 26 0.756 - - - - - - - 0.756 - - integrin subunit alpha V [Source:NCBI gene;Acc:396420]
98. QRSL1 ENSGALG00000015338 16 0.745 - - - 0.745 - - - - - - QRSL1, glutaminyl-tRNA amidotransferase subunit A [Source:HGNC Symbol;Acc:HGNC:21020]
99. EPT1L ENSGALG00000015219 15 0.745 - - - 0.745 - - - - - - ethanolaminephosphotransferase 1-like
100. ENSGALG00000028957 ENSGALG00000028957 7 0.744 - - - - - - - 0.744 - -

There are 20 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA