Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CDH2

Gene Name Gene ID Reads Annotation
CDH2 ENSGALG00000015132 2848 cadherin 2 [Source:NCBI gene;Acc:414745]











Genes with expression patterns similar to CDH2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CDH2 ENSGALG00000015132 2848 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cadherin 2 [Source:NCBI gene;Acc:414745]
2. FIBIN ENSGALG00000023904 3350 1.496 - - - - - - - - 0.743 0.753 fin bud initiation factor homolog [Source:NCBI gene;Acc:426933]
3. LASP-2 LASP-2 4415 1.443 0.719 - - - - 0.724 - - - -
4. TGFB2 ENSGALG00000009612 10223 1.439 - - - - - - - - 0.716 0.723 transforming growth factor beta 2 [Source:NCBI gene;Acc:421352]
5. UPF2 ENSGALG00000033772 9548 0.861 - - - - - - - - 0.861 - UPF2, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:17854]
6. ZNF618 ENSGALG00000008886 1326 0.853 - - - - - - 0.853 - - - zinc finger protein 618 [Source:HGNC Symbol;Acc:HGNC:29416]
7. PPP2R3A ENSGALG00000034512 1091 0.84 - - - - - - 0.840 - - - protein phosphatase 2 regulatory subunit B''alpha [Source:HGNC Symbol;Acc:HGNC:9307]
8. SPTLC2 ENSGALG00000031928 443 0.837 - - - - - - 0.837 - - - serine palmitoyltransferase long chain base subunit 2 [Source:NCBI gene;Acc:423379]
9. SEMA3D ENSGALG00000006563 655 0.829 - - - - - - - - - 0.829 semaphorin 3D [Source:NCBI gene;Acc:396332]
10. YBX1 ENSGALG00000004848 20992 0.828 0.828 - - - - - - - - - Y-box binding protein 1 [Source:NCBI gene;Acc:386575]
11. TAP1 ENSGALG00000035075 54 0.822 - - - - - - 0.822 - - - transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) [Source:NCBI gene;Acc:427727]
12. FAM69A ENSGALG00000005918 157 0.818 - - - - - - 0.818 - - - family with sequence similarity 69 member A, transcript variant X4
13. NPR3 ENSGALG00000017405 2500 0.818 - - - - - - - - 0.818 - natriuretic peptide receptor 3 [Source:HGNC Symbol;Acc:HGNC:7945]
14. MYL4 ENSGALG00000000585 16982 0.809 - - - - - 0.809 - - - - myosin, light chain 4, alkali; atrial, embryonic [Source:NCBI gene;Acc:396472]
15. MSRA ENSGALG00000028032 2607 0.802 - - - - - - - - 0.802 - methionine sulfoxide reductase A [Source:HGNC Symbol;Acc:HGNC:7377]
16. PDE10A ENSGALG00000011537 642 0.799 - - - - - - 0.799 - - - phosphodiesterase 10A [Source:HGNC Symbol;Acc:HGNC:8772]
17. NPTX2 ENSGALG00000003562 249 0.798 - - - - - - 0.798 - - - neuronal pentraxin 2 [Source:HGNC Symbol;Acc:HGNC:7953]
18. ANXA2 ENSGALG00000003770 18252 0.784 - - - - - - - - - 0.784 annexin A2 [Source:NCBI gene;Acc:396297]
19. ATP1B1 ENSGALG00000015233 5102 0.783 0.783 - - - - - - - - - ATPase Na+/K+ transporting subunit beta 1 [Source:NCBI gene;Acc:396529]
20. MCEE ENSGALG00000003913 1527 0.783 - - - - - - - - 0.783 - methylmalonyl-CoA epimerase [Source:NCBI gene;Acc:415385]
21. FAM171B ENSGALG00000002646 837 0.782 - - - - - 0.782 - - - - family with sequence similarity 171 member B [Source:HGNC Symbol;Acc:HGNC:29412]
22. RSF1 ENSGALG00000039068 3438 0.781 - - - - - - - - 0.781 - remodeling and spacing factor 1 [Source:HGNC Symbol;Acc:HGNC:18118]
23. TUBB2C TUBB2C 44249 0.775 - - - - - 0.775 - - - -
24. CIDEC ENSGALG00000026945 718 0.774 - - - - - - - - 0.774 - cell death inducing DFFA like effector c [Source:NCBI gene;Acc:100859733]
25. GLG1 ENSGALG00000039818 6221 0.773 0.773 - - - - - - - - - golgi glycoprotein 1 [Source:NCBI gene;Acc:396492]
26. TFB1M ENSGALG00000013647 84 0.772 - - - - - - 0.772 - - - transcription factor B1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:17037]
27. SCYL2 ENSGALG00000011569 920 0.768 - - - - - 0.768 - - - - SCY1 like pseudokinase 2 [Source:NCBI gene;Acc:417930]
28. ZOV3 ZOV3 3267 0.767 - - - - - - - - 0.767 -
29. PERP2 ENSGALG00000027207 1240 0.766 - - - - - - - - - 0.766 PERP2, TP53 apoptosis effector [Source:NCBI gene;Acc:421682]
30. GREB1 ENSGALG00000016455 12794 0.766 - - - - - - - - 0.766 - growth regulating estrogen receptor binding 1 [Source:HGNC Symbol;Acc:HGNC:24885]
31. ASH1L ENSGALG00000014638 803 0.763 - - - - - - 0.763 - - - ASH1 like histone lysine methyltransferase [Source:HGNC Symbol;Acc:HGNC:19088]
32. HES5 ENSGALG00000001141 6514 0.763 - - - - - 0.763 - - - - hes family bHLH transcription factor 5 [Source:NCBI gene;Acc:419392]
33. KLF4 ENSGALG00000026928 184 0.763 - - - - - - 0.763 - - - Kruppel like factor 4 [Source:HGNC Symbol;Acc:HGNC:6348]
34. TMED10 ENSGALG00000010318 9317 0.763 - - - - - - - - 0.763 - transmembrane p24 trafficking protein 10 [Source:NCBI gene;Acc:423362]
35. CKAP4 ENSGALG00000012659 36398 0.762 - - - - - - - - 0.762 - cytoskeleton associated protein 4 [Source:HGNC Symbol;Acc:HGNC:16991]
36. PITX2 ENSGALG00000042492 20419 0.759 - - - - - - - - - 0.759 paired like homeodomain 2 [Source:NCBI gene;Acc:395862]
37. PLEKHH2 ENSGALG00000009947 6384 0.759 - - - - - - - - 0.759 - pleckstrin homology, MyTH4 and FERM domain containing H2 [Source:HGNC Symbol;Acc:HGNC:30506]
38. ANO6 ENSGALG00000009638 470 0.759 - - - - - - 0.759 - - - anoctamin 6 [Source:HGNC Symbol;Acc:HGNC:25240]
39. HSPA13 ENSGALG00000019201 712 0.758 - - - - - - 0.758 - - - heat shock protein family A (Hsp70) member 13 [Source:NCBI gene;Acc:418469]
40. TTC12 1384 0.756 - - - - - - 0.756 - - - tetratricopeptide repeat domain 12, transcript variant X4
41. EPHA3 ENSGALG00000015403 9811 0.755 - - - - - - - - 0.755 - EPH receptor A3 [Source:NCBI gene;Acc:396402]
42. ANO1 ENSGALG00000041808 5149 0.754 - - - - - - - - 0.754 - anoctamin 1 [Source:HGNC Symbol;Acc:HGNC:21625]
43. CRISPLD2 ENSGALG00000032143 2122 0.753 - - - - - - - - 0.753 - cysteine rich secretory protein LCCL domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25248]
44. WDR35 157 0.753 - - - - - - 0.753 - - - WD repeat domain 35, transcript variant X1
45. PTPLAD1 PTPLAD1 292 0.752 - - - - - - - - 0.752 -
46. GLO1 ENSGALG00000010127 31662 0.751 - - - - - - - - 0.751 - glyoxalase I [Source:HGNC Symbol;Acc:HGNC:4323]
47. SLCO3A1 ENSGALG00000006871 1125 0.751 - - - - - - 0.751 - - - solute carrier organic anion transporter family member 3A1 [Source:HGNC Symbol;Acc:HGNC:10952]
48. EPHB3 ENSGALG00000008537 1843 0.751 - - - - - - - - 0.751 - EPH receptor B3 [Source:HGNC Symbol;Acc:HGNC:3394]
49. LIPG ENSGALG00000043734 2490 0.749 - - - - - 0.749 - - - - lipase G, endothelial type [Source:HGNC Symbol;Acc:HGNC:6623]
50. LYRM1 ENSGALG00000002273 1523 0.748 - - - - - - 0.748 - - - LYR motif containing 1 [Source:NCBI gene;Acc:427003]
51. LGALSL ENSGALG00000027096 390 0.748 - - - - - 0.748 - - - - galectin like [Source:NCBI gene;Acc:421278]
52. SGSM3 ENSGALG00000012033 1839 0.747 - - - - - - - - 0.747 - small G protein signaling modulator 3 [Source:HGNC Symbol;Acc:HGNC:25228]
53. TMEM64 ENSGALG00000042599 859 0.746 - - - - - - - - 0.746 - transmembrane protein 64 [Source:HGNC Symbol;Acc:HGNC:25441]
54. KIAA0913 KIAA0913 776 0.746 - - - - - - 0.746 - - -
55. ENSGALG00000011906 ENSGALG00000011906 181 0.746 - - - - - - - - - 0.746
56. METAP1 ENSGALG00000012239 1125 0.745 - - - - - - 0.745 - - - methionyl aminopeptidase 1 [Source:NCBI gene;Acc:422704]
57. UBE2R2 ENSGALG00000001668 9234 0.744 - - - - - - - - 0.744 - ubiquitin conjugating enzyme E2 R2 [Source:NCBI gene;Acc:427021]
58. VWDE ENSGALG00000042443 160 0.743 - - - - - - 0.743 - - - von Willebrand factor D and EGF domains [Source:HGNC Symbol;Acc:HGNC:21897]
59. RNF170 ENSGALG00000015386 296 0.743 - - - - - - 0.743 - - - ring finger protein 170 [Source:NCBI gene;Acc:427296]
60. CENPT ENSGALG00000028900 674 0.743 - - - - - - 0.743 - - - centromere protein T [Source:NCBI gene;Acc:415654]
61. BCLAF1 ENSGALG00000013935 7596 0.742 - - - - - - - - 0.742 - BCL2 associated transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:16863]
62. XKR6 ENSGALG00000016646 326 0.74 - - - - - - - - 0.740 - XK related 6 [Source:HGNC Symbol;Acc:HGNC:27806]
63. KIAA0408 ENSGALG00000030211 934 0.74 - - - - - - - 0.740 - - KIAA0408 [Source:HGNC Symbol;Acc:HGNC:21636]
64. CRABP-I ENSGALG00000003193 67258 0.74 - - - - - 0.740 - - - - cellular retinoic acid binding protein 1 [Source:NCBI gene;Acc:374211]
65. LDHB ENSGALG00000035836 169726 0.738 - - - - - 0.738 - - - - lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
66. TMEM65 ENSGALG00000037371 776 0.738 - - - - - - 0.738 - - - transmembrane protein 65 [Source:NCBI gene;Acc:428387]
67. MRPS36 ENSGALG00000014789 7584 0.738 - - - - - 0.738 - - - - mitochondrial ribosomal protein S36 [Source:HGNC Symbol;Acc:HGNC:16631]
68. MST1 ENSGALG00000002722 994 0.737 - - - - - - - - 0.737 - macrophage stimulating 1 (hepatocyte growth factor-like) [Source:NCBI gene;Acc:396135]
69. MYLIP ENSGALG00000012704 983 0.737 - - - - - - 0.737 - - - myosin regulatory light chain interacting protein [Source:NCBI gene;Acc:420841]
70. MEIS2 ENSGALG00000039118 81591 0.736 - - - - - - - - 0.736 - Meis homeobox 2 [Source:NCBI gene;Acc:395588]
71. ADAP2 ENSGALG00000003319 134 0.735 - - - - - - 0.735 - - - ArfGAP with dual PH domains 2 [Source:HGNC Symbol;Acc:HGNC:16487]
72. EFHD2 ENSGALG00000038313 1745 0.734 - - - - - - - - 0.734 - EF-hand domain family member D2 [Source:HGNC Symbol;Acc:HGNC:28670]
73. SNTA1 ENSGALG00000029694 3177 0.733 - - - - - - - - 0.733 - syntrophin alpha 1 [Source:HGNC Symbol;Acc:HGNC:11167]
74. PTPN21 ENSGALG00000010616 129 0.733 - - - - - - 0.733 - - - protein tyrosine phosphatase, non-receptor type 21 [Source:HGNC Symbol;Acc:HGNC:9651]
75. ABCC10 2213 0.733 - - - - - - - - 0.733 - ATP binding cassette subfamily C member 10, transcript variant X10
76. LONRF1 ENSGALG00000013725 1508 0.733 - - - - - - 0.733 - - - LON peptidase N-terminal domain and ring finger 1 [Source:HGNC Symbol;Acc:HGNC:26302]
77. GPR125 GPR125 2753 0.733 - - - - - - - - 0.733 -
78. KIAA1244 KIAA1244 62 0.733 - - - - - - 0.733 - - -
79. SMARCD3 ENSGALG00000043137 401 0.732 - - - - - - 0.732 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 [Source:HGNC Symbol;Acc:HGNC:11108]
80. CERCAM ENSGALG00000004986 5158 0.732 - - - - - 0.732 - - - - cerebral endothelial cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:23723]
81. NLGN4 NLGN4 283 0.732 - - - - - - - - 0.732 -
82. EMP1 ENSGALG00000011803 351 0.732 - - - - - 0.732 - - - - epithelial membrane protein 1 [Source:NCBI gene;Acc:417964]
83. EMC8 ENSGALG00000005744 9422 0.729 - - - - - - 0.729 - - - ER membrane protein complex subunit 8
84. TFPI ENSGALG00000002594 1395 0.729 - - - - - - - - 0.729 - tissue factor pathway inhibitor [Source:HGNC Symbol;Acc:HGNC:11760]
85. USP42 ENSGALG00000003378 1392 0.728 - - - - - - 0.728 - - - ubiquitin specific peptidase 42 [Source:HGNC Symbol;Acc:HGNC:20068]
86. CAT-1 CAT-1 115 0.728 - - - - - - 0.728 - - -
87. LOC112532477 ENSGALG00000027520 40 0.728 - - - - - - 0.728 - - - fibrinogen-like protein 1-like protein
88. PANX1 ENSGALG00000039751 70 0.727 - - - - - - 0.727 - - - pannexin 1 [Source:HGNC Symbol;Acc:HGNC:8599]
89. NCAM1 ENSGALG00000007839 19929 0.726 - - - - - 0.726 - - - - Gallus gallus neural cell adhesion molecule 1 (NCAM1), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001242604]
90. FREM3 ENSGALG00000020561 1824 0.725 - - - - - - - - 0.725 - FRAS1 related extracellular matrix 3
91. TMEM237 ENSGALG00000008381 1317 0.724 - - - - - - - - 0.724 - transmembrane protein 237 [Source:NCBI gene;Acc:424084]
92. IQCH ENSGALG00000007909 128 0.724 - - - - - - 0.724 - - - IQ motif containing H [Source:HGNC Symbol;Acc:HGNC:25721]
93. PRKAR1A ENSGALG00000004237 4785 0.724 0.724 - - - - - - - - - protein kinase cAMP-dependent type I regulatory subunit alpha [Source:NCBI gene;Acc:417438]
94. ARID1B ENSGALG00000013683 3397 0.723 - - - - - - - - 0.723 - AT-rich interaction domain 1B [Source:HGNC Symbol;Acc:HGNC:18040]
95. CHST9 ENSGALG00000019489 21 0.723 - - - - - - 0.723 - - - carbohydrate sulfotransferase 9 [Source:HGNC Symbol;Acc:HGNC:19898]
96. FAM46C 13 0.723 - - - - - - 0.723 - - - family with sequence similarity 46 member C
97. MIA3 ENSGALG00000041034 2038 0.723 - - - - - - 0.723 - - - MIA family member 3, ER export factor [Source:NCBI gene;Acc:421337]
98. MBL2 ENSGALG00000002507 17 0.723 - - - - - - 0.723 - - - mannose binding lectin 2 [Source:NCBI gene;Acc:374267]
99. RTN1 ENSGALG00000012006 2438 0.723 - - - - - 0.723 - - - - reticulon 1 [Source:NCBI gene;Acc:378791]
100. MAP3K19 ENSGALG00000028457 17 0.723 - - - - - - 0.723 - - - mitogen-activated protein kinase kinase kinase 19 [Source:HGNC Symbol;Acc:HGNC:26249]

There are 54 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA