Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for CDH16

Gene Name Gene ID Reads Annotation
CDH16 ENSDARG00000077570 78 cadherin 16, KSP-cadherin [Source:ZFIN;Acc:ZDB-GENE-140106-140]










Genes with expression patterns similar to CDH16

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. CDH16 ENSDARG00000077570 78 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cadherin 16, KSP-cadherin [Source:ZFIN;Acc:ZDB-GENE-140106-140]
2. stc1l ENSDARG00000058476 512 4.116 - - - 0.789 0.774 0.972 - 0.745 0.836 stanniocalcin 1, like [Source:ZFIN;Acc:ZDB-GENE-040426-1521]
3. CU856140.1 CU856140.1 4316 1.853 - - - - - 0.959 0.894 - -
4. nrros ENSDARG00000071491, ENSDARG00000112102 64 1.78 - - - - - 0.959 0.821 - - negative regulator of reactive oxygen species [Source:ZFIN;Acc:ZDB-GENE-040808-36]
5. mbpa ENSDARG00000036186 4 1.771 - - - - - 0.814 - - 0.957 myelin basic protein a [Source:ZFIN;Acc:ZDB-GENE-030128-2]
6. si:dkey-22i16.7 ENSDARG00000094910 47 1.759 0.841 - - - 0.918 - - - - si:dkey-22i16.7 [Source:ZFIN;Acc:ZDB-GENE-090313-259]
7. zgc:162724 zgc:162724 9 1.723 - - - - 0.918 - 0.805 - -
8. KIF9 ENSDARG00000031693 11 1.719 - - - - - 0.945 0.774 - - kinesin family member 9 [Source:ZFIN;Acc:ZDB-GENE-160728-129]
9. si:dkey-66i24.10 si:dkey-66i24.10 6 1.717 - - - - 0.903 0.814 - - -
10. gbgt1l1 ENSDARG00000025275 21 1.701 - - 0.968 - - 0.733 - - - globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1117]
11. cgrrf1 ENSDARG00000037040, ENSDARG00000109850, ENSDARG00000110308 50 1.689 - - - - - 0.795 0.894 - - cell growth regulator with ring finger domain 1 [Source:ZFIN;Acc:ZDB-GENE-040724-100]
12. VASP VASP 22 1.681 0.867 - - - - 0.814 - - -
13. lrtomt lrtomt 39 1.676 - - 0.877 - - 0.799 - - -
14. mfap4 ENSDARG00000090783 480 1.664 - 0.916 - - - 0.748 - - - microfibril associated protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2246]
15. foxa ENSDARG00000087094, ENSDARG00000110743, ENSDARG00000115019 6 1.664 - - 0.939 - - - - 0.725 - forkhead box A sequence [Source:ZFIN;Acc:ZDB-GENE-990415-76]
16. prkacbb_1 ENSDARG00000059125 83 1.661 - - - - - 0.767 0.894 - - protein kinase, cAMP-dependent, catalytic, beta b [Source:ZFIN;Acc:ZDB-GENE-050904-4]
17. si:ch211-163l21.8 ENSDARG00000042899 724 1.645 0.790 - - - - - 0.855 - - si:ch211-163l21.8 [Source:ZFIN;Acc:ZDB-GENE-041008-93]
18. nanos3 ENSDARG00000068255 319 1.626 0.836 - - - - 0.790 - - - nanos homolog 3 [Source:ZFIN;Acc:ZDB-GENE-011221-1]
19. FAM163A_1 ENSDARG00000093021 6 1.625 - 0.707 - - 0.918 - - - - family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
20. rtn4rl2b ENSDARG00000037495 11 1.619 - - - - - 0.814 0.805 - - reticulon 4 receptor-like 2b [Source:ZFIN;Acc:ZDB-GENE-040310-2]
21. cpa2 ENSDARG00000010146 28 1.614 - - - 0.790 - - 0.824 - - carboxypeptidase A2 (pancreatic) [Source:ZFIN;Acc:ZDB-GENE-040801-182]
22. robo1 ENSDARG00000026784 125 1.607 0.713 - - - - - 0.894 - - roundabout, axon guidance receptor, homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000209-3]
23. rest ENSDARG00000103046 51 1.603 0.757 - - - 0.846 - - - - RE1-silencing transcription factor [Source:ZFIN;Acc:ZDB-GENE-080415-1]
24. eif4e1b ENSDARG00000014565 12 1.603 - 0.707 0.896 - - - - - - eukaryotic translation initiation factor 4E family member 1B [Source:ZFIN;Acc:ZDB-GENE-980526-127]
25. ibtk ENSDARG00000074424 146 1.599 - 0.800 - - - 0.799 - - - inhibitor of Bruton agammaglobulinemia tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-030131-6246]
26. si:ch73-61d6.3 ENSDARG00000057826 274 1.578 - 0.716 - - - 0.862 - - - si:ch73-61d6.3 [Source:ZFIN;Acc:ZDB-GENE-091204-109]
27. samsn1a ENSDARG00000054543 28 1.576 - - - - - 0.839 - - 0.737 SAM domain, SH3 domain and nuclear localisation signals 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8639]
28. PPP2R2A PPP2R2A 50 1.574 0.867 0.707 - - - - - - -
29. CR376848.1 ENSDARG00000115549 149 1.568 0.841 - - - - 0.727 - - - neutral cholesterol ester hydrolase 1-like [Source:NCBI gene;Acc:797436]
30. ube3d ENSDARG00000026178 244 1.558 0.837 0.721 - - - - - - - ubiquitin protein ligase E3D [Source:ZFIN;Acc:ZDB-GENE-091218-3]
31. si:dkey-23a23.3 ENSDARG00000088214 86 1.555 - 0.760 - - - - 0.795 - - si:dkey-23a23.3 [Source:ZFIN;Acc:ZDB-GENE-110913-89]
32. pign ENSDARG00000077532 123 1.544 0.797 - - - - 0.747 - - - phosphatidylinositol glycan anchor biosynthesis, class N [Source:ZFIN;Acc:ZDB-GENE-080204-114]
33. mcm5_1 ENSDARG00000019507 10 1.539 - - - - - 0.814 0.725 - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
34. scn4bb ENSDARG00000060319, ENSDARG00000112427 63 1.532 - - - - 0.819 0.713 - - - sodium channel, voltage-gated, type IV, beta b [Source:ZFIN;Acc:ZDB-GENE-031116-71]
35. si:dkey-151m22.8 ENSDARG00000095934 41 1.531 - 0.783 - - - - 0.748 - - si:dkey-151m22.8 [Source:ZFIN;Acc:ZDB-GENE-110411-250]
36. gucy2c ENSDARG00000014320, ENSDARG00000116238 322 1.53 - - - - 0.820 - 0.710 - - guanylate cyclase 2C [Source:ZFIN;Acc:ZDB-GENE-091118-67]
37. acy3.1 ENSDARG00000093003 54 1.522 - - 0.813 - - - - - 0.709 aspartoacylase (aminocyclase) 3, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040718-345]
38. CABZ01086354.1 CABZ01086354.1 22 1.521 - 0.707 - - - 0.814 - - -
39. ENSDARG00000096199 ENSDARG00000096199 15 1.521 - 0.707 - - - 0.814 - - -
40. svopb ENSDARG00000014951 1 1.521 - 0.707 - - - 0.814 - - - SV2 related protein b [Source:ZFIN;Acc:ZDB-GENE-070705-359]
41. snai3 ENSDARG00000031243 31 1.521 - 0.707 - - - 0.814 - - - snail family zinc finger 3 [Source:ZFIN;Acc:ZDB-GENE-061013-757]
42. LINS LINS 42 1.512 - 0.707 - - - - 0.805 - -
43. CR457441.2 CR457441.2 82 1.508 0.725 0.783 - - - - - - -
44. admb ENSDARG00000069027 67 1.507 - - - - - 0.732 0.775 - - adrenomedullin b [Source:ZFIN;Acc:ZDB-GENE-120221-6]
45. sh3bp2 ENSDARG00000021982 61 1.503 - - - - - 0.708 0.795 - - SH3-domain binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-091204-268]
46. zgc:158446 36 1.503 - - - - - 0.799 0.704 - - zgc:158446
47. ADAP2 ENSDARG00000070565 29 1.5 - - - - - 0.775 0.725 - - ArfGAP with dual PH domains 2 [Source:ZFIN;Acc:ZDB-GENE-070912-21]
48. rbpms2a ENSDARG00000045930 234 1.499 - - - - - 0.770 0.729 - - RNA binding protein, mRNA processing factor 2a [Source:ZFIN;Acc:ZDB-GENE-040718-106]
49. s100b ENSDARG00000057598 41 1.491 - 0.783 0.708 - - - - - - S100 calcium binding protein, beta (neural) [Source:ZFIN;Acc:ZDB-GENE-040718-290]
50. CTIF ENSDARG00000090617 270 1.49 0.762 - - - - - 0.728 - - CBP80/20-dependent translation initiation factor [Source:ZFIN;Acc:ZDB-GENE-130530-1003]
51. si:ch211-161h7.5 ENSDARG00000093044 12 1.484 - - - - 0.759 - 0.725 - - si:ch211-161h7.5 [Source:ZFIN;Acc:ZDB-GENE-091204-265]
52. atp8b5b 55 1.47 - - - - - 0.705 0.765 - - ATPase, class I, type 8B, member 5b
53. nceh1b nceh1b 22 1.434 - 0.707 - - - - - - 0.727
54. BX005410.2 BX005410.2 44 0.983 - - - - - 0.983 - - -
55. si:ch211-279l9.7 si:ch211-279l9.7 3 0.982 - - 0.982 - - - - - -
56. ENSDARG00000089100 ENSDARG00000089100 5 0.968 - - 0.968 - - - - - -
57. XCR1 XCR1 9 0.968 - - 0.968 - - - - - -
58. kcnd2 ENSDARG00000032799 1 0.968 - - 0.968 - - - - - - potassium voltage-gated channel, Shal-related subfamily, member 2 [Source:ZFIN;Acc:ZDB-GENE-041210-70]
59. CU207301.2 ENSDARG00000097677 2 0.968 - - 0.968 - - - - - -
60. rhoga ENSDARG00000068653 13 0.968 - - 0.968 - - - - - - ras homolog family member Ga [Source:ZFIN;Acc:ZDB-GENE-060503-820]
61. si:dkey-26i13.6 ENSDARG00000092200 3 0.968 - - 0.968 - - - - - - si:dkey-26i13.6 [Source:ZFIN;Acc:ZDB-GENE-090312-165]
62. ifnphi1 ENSDARG00000025607 6 0.968 - - 0.968 - - - - - - interferon phi 1 [Source:ZFIN;Acc:ZDB-GENE-030721-3]
63. antxr1a ENSDARG00000025672 32 0.968 - - 0.968 - - - - - - ANTXR cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-110411-15]
64. si:ch211-173b9.5 si:ch211-173b9.5 2 0.968 - - 0.968 - - - - - -
65. si:ch211-179l5.4 si:ch211-179l5.4 3 0.968 - - 0.968 - - - - - -
66. si:ch211-204a13.1 si:ch211-204a13.1 6 0.968 - - 0.968 - - - - - -
67. igfbp6a ENSDARG00000070941 9 0.968 - - 0.968 - - - - - - insulin-like growth factor binding protein 6a [Source:ZFIN;Acc:ZDB-GENE-090521-1]
68. fermt3b ENSDARG00000030938 17 0.966 - - - - - - - - 0.966 fermitin family member 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1366]
69. ighm ighm 6 0.966 - - 0.966 - - - - - -
70. CABZ01002345.1 CABZ01002345.1 3 0.963 - - 0.963 - - - - - -
71. zgc:198241 ENSDARG00000076483, ENSDARG00000116081 3 0.957 - - 0.957 - - - - - - zgc:198241 [Source:ZFIN;Acc:ZDB-GENE-080303-14]
72. tsen54 ENSDARG00000036844 11 0.955 - - 0.955 - - - - - - TSEN54 tRNA splicing endonuclease subunit [Source:ZFIN;Acc:ZDB-GENE-050522-454]
73. si:dkey-229d11.5 ENSDARG00000094392 33 0.954 0.954 - - - - - - - - si:dkey-229d11.5 [Source:ZFIN;Acc:ZDB-GENE-030131-5342]
74. sdccag8 ENSDARG00000078947 68 0.952 - - - - - 0.952 - - - serologically defined colon cancer antigen 8 [Source:ZFIN;Acc:ZDB-GENE-090313-318]
75. psme1 ENSDARG00000002165, ENSDARG00000115834 72 0.952 - - - - - 0.952 - - - proteasome activator subunit 1 [Source:ZFIN;Acc:ZDB-GENE-991110-17]
76. C9H17orf105 C9H17orf105 29 0.952 - - - - - 0.952 - - -
77. fgf24 ENSDARG00000037677 242 0.952 - - - - - 0.952 - - - fibroblast growth factor 24 [Source:ZFIN;Acc:ZDB-GENE-030708-1]
78. bmp15 ENSDARG00000037491 16 0.948 - - 0.948 - - - - - - bone morphogenetic protein 15 [Source:ZFIN;Acc:ZDB-GENE-030131-6115]
79. zgc:162144 ENSDARG00000037603, ENSDARG00000109982 11 0.948 - - 0.948 - - - - - - zgc:162144 [Source:ZFIN;Acc:ZDB-GENE-030131-7630]
80. ms4a17a.4 ENSDARG00000014024 36 0.946 - - 0.946 - - - - - - membrane-spanning 4-domains, subfamily A, member 17A.4 [Source:ZFIN;Acc:ZDB-GENE-070822-16]
81. CU694374.2 CU694374.2 5 0.945 - - - - - 0.945 - - -
82. tmem204 ENSDARG00000045273 42 0.945 - - - - - 0.945 - - - transmembrane protein 204 [Source:ZFIN;Acc:ZDB-GENE-040724-12]
83. cyp2ad6 ENSDARG00000042956 59 0.945 - - - - - 0.945 - - - cytochrome P450, family 2, subfamily AD, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-041001-157]
84. piwil2 ENSDARG00000062601 14 0.945 - - - - - 0.945 - - - piwi-like RNA-mediated gene silencing 2 [Source:ZFIN;Acc:ZDB-GENE-060526-345]
85. marco ENSDARG00000059294 17 0.945 - - - - - 0.945 - - - macrophage receptor with collagenous structure [Source:ZFIN;Acc:ZDB-GENE-120514-2]
86. si:dkey-183p4.10 ENSDARG00000077907 5 0.945 - - - - - 0.945 - - - si:dkey-183p4.10 [Source:ZFIN;Acc:ZDB-GENE-081104-337]
87. CR339057.1 CR339057.1 7 0.945 - - - - - 0.945 - - -
88. PEG3_27 PEG3_27 10 0.945 - - - - - 0.945 - - -
89. asah2 ENSDARG00000012829 13 0.945 - - - - - 0.945 - - - N-acylsphingosine amidohydrolase 2 [Source:ZFIN;Acc:ZDB-GENE-041112-1]
90. atp8b3 ENSDARG00000042285 31 0.945 - - - - - 0.945 - - - ATPase phospholipid transporting 8B3 [Source:ZFIN;Acc:ZDB-GENE-050208-424]
91. NEK11 ENSDARG00000087564 40 0.944 - - - - - 0.944 - - - NIMA-related kinase 11 [Source:ZFIN;Acc:ZDB-GENE-100922-73]
92. WIPF1 WIPF1 32 0.943 - - 0.943 - - - - - -
93. LRFN2_1 LRFN2_1 17 0.941 - - 0.941 - - - - - -
94. art4 ENSDARG00000078178 44 0.939 - - 0.939 - - - - - - ADP-ribosyltransferase 4 (Dombrock blood group) [Source:ZFIN;Acc:ZDB-GENE-070725-5]
95. si:ch211-103n10.5 ENSDARG00000077504, ENSDARG00000116548 8 0.939 - - - - - - - - 0.939 si:ch211-103n10.5 [Source:ZFIN;Acc:ZDB-GENE-030131-5155]
96. FAM200A FAM200A 19 0.929 - - 0.929 - - - - - -
97. si:ch211-179l5.6 si:ch211-179l5.6 33 0.928 - - 0.928 - - - - - -
98. calml4a ENSDARG00000075800 14 0.928 - - 0.928 - - - - - - calmodulin-like 4a [Source:ZFIN;Acc:ZDB-GENE-081022-9]
99. C1H9orf156 C1H9orf156 122 0.926 - 0.926 - - - - - - -
100. si:ch211-286b5.9 ENSDARG00000086166 27 0.924 - - - - - 0.924 - - - si:ch211-286b5.9 [Source:ZFIN;Acc:ZDB-GENE-121214-63]

There are 1083 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA