Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CDH13

Gene Name Gene ID Reads Annotation
CDH13 ENSGALG00000005483 93 cadherin 13 [Source:NCBI gene;Acc:414849]











Genes with expression patterns similar to CDH13

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CDH13 ENSGALG00000005483 93 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 cadherin 13 [Source:NCBI gene;Acc:414849]
2. NFATC2 ENSGALG00000007963 15 0.96 - - - - - - - - - 0.960 nuclear factor of activated T cells 2 [Source:HGNC Symbol;Acc:HGNC:7776]
3. EPHA2 ENSGALG00000039895 12 0.96 - - - - - - - - - 0.960 EPH receptor A2 [Source:HGNC Symbol;Acc:HGNC:3386]
4. KBTBD8 ENSGALG00000007569 20 0.95 - - - - - - - - - 0.950 kelch repeat and BTB domain containing 8 [Source:HGNC Symbol;Acc:HGNC:30691]
5. ENSGALG00000028061 ENSGALG00000028061 2 0.949 - - - - - - - - - 0.949
6. HHIPL2 ENSGALG00000045729 9 0.949 - - - - - - - - - 0.949 HHIP like 2 [Source:HGNC Symbol;Acc:HGNC:25842]
7. ADAM8 5 0.949 - - - - - - - - - 0.949 ADAM metallopeptidase domain 8, transcript variant X4
8. LZTS3 ENSGALG00000016001 3 0.949 - - - - - - - - - 0.949 leucine zipper tumor suppressor family member 3 [Source:HGNC Symbol;Acc:HGNC:30139]
9. MYH1B ENSGALG00000039977 3 0.949 - - - - - - - - - 0.949 myosin, heavy chain 1B, skeletal muscle [Source:NCBI gene;Acc:374069]
10. KL ENSGALG00000017068 21 0.949 - - - - - - - - - 0.949 klotho [Source:HGNC Symbol;Acc:HGNC:6344]
11. IL17F ENSGALG00000016677 9 0.949 - - - - - - - - - 0.949 interleukin 17F
12. GP9 GP9 6 0.949 - - - - - - - - - 0.949
13. CACNA1I ENSGALG00000035051 27 0.944 - - - - - - - - - 0.944 calcium voltage-gated channel subunit alpha1 I, transcript variant X3
14. AK8 ENSGALG00000040923 10 0.942 - - - - - - - - - 0.942 adenylate kinase 8, transcript variant X1
15. ENSGALG00000006582 ENSGALG00000006582 8 0.938 - - - - - - - - - 0.938
16. TAF4B ENSGALG00000015122 28 0.93 - - - - - - - - - 0.930 TATA-box binding protein associated factor 4b [Source:HGNC Symbol;Acc:HGNC:11538]
17. APOB ENSGALG00000016491 34 0.928 - - - - - 0.928 - - - - apolipoprotein B [Source:NCBI gene;Acc:396535]
18. SEC31B ENSGALG00000005722 13 0.919 - - - - - - - - - 0.919 SEC31 homolog B, COPII coat complex component [Source:HGNC Symbol;Acc:HGNC:23197]
19. BLNK ENSGALG00000006973 85 0.915 - - - - - - - - - 0.915 B cell linker [Source:NCBI gene;Acc:395733]
20. SEMA4G ENSGALG00000026957 11 0.915 - - - - - - - - - 0.915 semaphorin 4G [Source:HGNC Symbol;Acc:HGNC:10735]
21. NOX5 ENSGALG00000008063 19 0.915 - - - - - - - - - 0.915 NADPH oxidase 5 [Source:NCBI gene;Acc:415565]
22. DDX60 27 0.912 - - - - - - - - - 0.912 DExD/H-box helicase 60, transcript variant X2
23. ZNF362 ENSGALG00000026558 11 0.907 - - - - - - - - - 0.907 zinc finger protein 362 [Source:HGNC Symbol;Acc:HGNC:18079]
24. DENND3 ENSGALG00000031380 11 0.905 - - - - - - - - - 0.905 DENN domain containing 3 [Source:HGNC Symbol;Acc:HGNC:29134]
25. ENSGALG00000019291 ENSGALG00000019291 4 0.904 - - - - - - - - - 0.904
26. PPM1L ENSGALG00000009537 5 0.9 - - - - - - - - - 0.900 protein phosphatase, Mg2+/Mn2+ dependent 1L [Source:HGNC Symbol;Acc:HGNC:16381]
27. MICALL2 ENSGALG00000004070 23 0.893 - - - - - - - - - 0.893 MICAL like 2 [Source:HGNC Symbol;Acc:HGNC:29672]
28. EEFSEC ENSGALG00000038684 298 0.889 - - - - - - - - - 0.889 eukaryotic elongation factor, selenocysteine-tRNA specific [Source:HGNC Symbol;Acc:HGNC:24614]
29. CDC42EP3 ENSGALG00000010551 15 0.889 - - - - - - - - - 0.889 CDC42 effector protein 3 [Source:HGNC Symbol;Acc:HGNC:16943]
30. UBA2 ENSGALG00000005006 243 0.889 - - - - - - - - - 0.889 ubiquitin like modifier activating enzyme 2 [Source:NCBI gene;Acc:415784]
31. STAM2 ENSGALG00000012513 9 0.886 - - - - - - - - - 0.886 signal transducing adaptor molecule 2 [Source:NCBI gene;Acc:424317]
32. LRFN2 ENSGALG00000010050 28 0.882 - - - - - - - - - 0.882 leucine rich repeat and fibronectin type III domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21226]
33. SPIDR SPIDR 19 0.876 - - - - - - - - - 0.876
34. TMPRSS9 ENSGALG00000000458 21 0.874 - - - - - - - - - 0.874 transmembrane serine protease 9 [Source:HGNC Symbol;Acc:HGNC:30079]
35. MAPK14 ENSGALG00000042833 13 0.872 - - - - - - - - - 0.872 mitogen-activated protein kinase 14 [Source:HGNC Symbol;Acc:HGNC:6876]
36. CSMD1 ENSGALG00000035230 12 0.87 - - - - - - - - - 0.870 CUB and Sushi multiple domains 1 [Source:HGNC Symbol;Acc:HGNC:14026]
37. BST1 ENSGALG00000014509 12 0.867 - - - - - - - - - 0.867 bone marrow stromal cell antigen 1 [Source:NCBI gene;Acc:422828]
38. NCF4 ENSGALG00000038141 216 0.866 - - - - - - - - - 0.866 neutrophil cytosolic factor 4 [Source:NCBI gene;Acc:418052]
39. SP5 ENSGALG00000034094 130 0.863 - - - - - - - - - 0.863 Sp5 transcription factor [Source:NCBI gene;Acc:693261]
40. PSTPIP2 ENSGALG00000040136 37 0.858 - - - - - - - - - 0.858 proline-serine-threonine phosphatase interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:9581]
41. NTN1 ENSGALG00000023626 12 0.855 - - - - - 0.855 - - - - netrin 1 [Source:NCBI gene;Acc:396389]
42. XYLB ENSGALG00000006173 23 0.854 - - - - - - - - - 0.854 xylulokinase [Source:HGNC Symbol;Acc:HGNC:12839]
43. ATF6 ENSGALG00000032278 71 0.853 - - - - - - - - - 0.853 activating transcription factor 6 [Source:HGNC Symbol;Acc:HGNC:791]
44. HOMER1 ENSGALG00000014813 19 0.851 - - - - - - - - - 0.851 homer scaffold protein 1 [Source:HGNC Symbol;Acc:HGNC:17512]
45. WISP1 ENSGALG00000030115 359 0.849 - - - - - - - - - 0.849 WNT1 inducible signaling pathway protein 1 [Source:NCBI gene;Acc:420322]
46. TNFIP6 TNFIP6 3024 0.846 - - - - - - - - - 0.846
47. gga-mir-1766 ENSGALG00000028725 54 0.84 - - - - - - - - - 0.840 gga-mir-1766 [Source:miRBase;Acc:MI0007508]
48. ENSGALG00000020972 ENSGALG00000020972 54 0.838 - - - - - - - - - 0.838
49. GTPBP8 ENSGALG00000015190 21 0.838 - - - - - - - - - 0.838 GTP binding protein 8 (putative) [Source:HGNC Symbol;Acc:HGNC:25007]
50. PDXK ENSGALG00000016205 26 0.836 - - - - - - - - - 0.836 pyridoxal kinase [Source:NCBI gene;Acc:418549]
51. ITGAV ENSGALG00000002655 26 0.835 - - - - - - - - - 0.835 integrin subunit alpha V [Source:NCBI gene;Acc:396420]
52. SLC41A2 ENSGALG00000012697 13 0.83 - - - - - - - - - 0.830 solute carrier family 41 member 2 [Source:NCBI gene;Acc:427913]
53. TMEM117 ENSGALG00000009596 48 0.827 - - - - - - - - - 0.827 transmembrane protein 117 [Source:HGNC Symbol;Acc:HGNC:25308]
54. TMEM178B ENSGALG00000028444 31 0.825 - - - - - - - - - 0.825 transmembrane protein 178B [Source:NCBI gene;Acc:418120]
55. CCND2 ENSGALG00000017283 38 0.824 - - - - - - - - - 0.824 cyclin D2 [Source:NCBI gene;Acc:374047]
56. PLTP ENSGALG00000036686 79 0.824 - - - - - - - - - 0.824 phospholipid transfer protein [Source:NCBI gene;Acc:428164]
57. UBE2A ENSGALG00000008648 174 0.822 - - - - - - - - - 0.822 ubiquitin conjugating enzyme E2 A [Source:NCBI gene;Acc:395672]
58. HMGI-C HMGI-C 34 0.822 - - - - - - - - - 0.822
59. ATP11A ENSGALG00000041644 74 0.82 - - - - - - - - - 0.820 ATPase phospholipid transporting 11A [Source:HGNC Symbol;Acc:HGNC:13552]
60. CCDC92 ENSGALG00000003146 40 0.818 - - - - - - - - - 0.818 coiled-coil domain containing 92 [Source:HGNC Symbol;Acc:HGNC:29563]
61. MAPKAPK3 ENSGALG00000002283 30 0.815 - - - - - - - - - 0.815 Gallus gallus mitogen-activated protein kinase-activated protein kinase 3 (MAPKAPK3), mRNA. [Source:RefSeq mRNA;Acc:NM_001321558]
62. PLXNB1 23 0.811 - - - - - - - - - 0.811 plexin B1, transcript variant X2
63. LMCD1 ENSGALG00000008349 928 0.807 - - - - - - - - - 0.807 LIM and cysteine rich domains 1 [Source:HGNC Symbol;Acc:HGNC:6633]
64. ERMN ENSGALG00000020575 46 0.805 - - - - - - - - - 0.805 ermin [Source:HGNC Symbol;Acc:HGNC:29208]
65. CENPM ENSGALG00000011914 18 0.804 - - - - - - - - - 0.804 centromere protein M [Source:NCBI gene;Acc:417982]
66. PSMG2 ENSGALG00000013863 351 0.803 - - - - - - - - - 0.803 proteasome assembly chaperone 2 [Source:HGNC Symbol;Acc:HGNC:24929]
67. FGF19 ENSGALG00000028376 104 0.802 - - - - - - - - - 0.802 fibroblast growth factor 19 [Source:NCBI gene;Acc:395394]
68. RGS7 ENSGALG00000039772 69 0.797 - - - - - - - - - 0.797 regulator of G-protein signaling 7 [Source:NCBI gene;Acc:395620]
69. PDE7B ENSGALG00000013941 49 0.796 - - - - - - - - - 0.796 phosphodiesterase 7B [Source:HGNC Symbol;Acc:HGNC:8792]
70. ERN2 ENSGALG00000027592 186 0.793 - - - - - - - - - 0.793 endoplasmic reticulum to nucleus signaling 2 [Source:NCBI gene;Acc:771230]
71. ARNTL ENSGALG00000005378 19 0.792 - - - - - - - - - 0.792 aryl hydrocarbon receptor nuclear translocator like [Source:NCBI gene;Acc:374115]
72. FKBP14 ENSGALG00000011181 154 0.79 - - - - - - - - - 0.790 FK506 binding protein 14 [Source:HGNC Symbol;Acc:HGNC:18625]
73. PROK2 ENSGALG00000007785 55 0.789 - - - - - - - - - 0.789 prokineticin 2 [Source:HGNC Symbol;Acc:HGNC:18455]
74. CADPS 33 0.787 - - - - - - - - - 0.787 calcium dependent secretion activator, transcript variant X19
75. ZMAT5 ENSGALG00000008070 304 0.783 - - - - - 0.783 - - - - zinc finger matrin-type 5 [Source:NCBI gene;Acc:417017]
76. FREM1 ENSGALG00000005426 61 0.783 - - - - - 0.783 - - - - FRAS1 related extracellular matrix 1 [Source:HGNC Symbol;Acc:HGNC:23399]
77. AMDHD1 ENSGALG00000011414 245 0.78 - - - - - - - - - 0.780 amidohydrolase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28577]
78. WWP2 ENSGALG00000000699 5040 0.78 - - - - - - - - - 0.780 WW domain containing E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:415868]
79. USP53 ENSGALG00000011990 12 0.775 - - - - - 0.775 - - - - ubiquitin specific peptidase 53 [Source:HGNC Symbol;Acc:HGNC:29255]
80. SERPINC1 ENSGALG00000004591 68 0.775 - - - - - - - - - 0.775 Gallus gallus serpin family C member 1 (SERPINC1), mRNA. [Source:RefSeq mRNA;Acc:NM_001353945]
81. ENSGALG00000006716 ENSGALG00000006716 280 0.775 - - - - - - - - - 0.775
82. CVG1 CVG1 636 0.774 - - - - - - - - - 0.774
83. PLEKHG4 ENSGALG00000023898 65 0.771 - - - - - - - - - 0.771 pleckstrin homology and RhoGEF domain containing G4 [Source:HGNC Symbol;Acc:HGNC:24501]
84. INOS INOS 313 0.758 - - - - - - - - - 0.758
85. PHC3 ENSGALG00000009372 157 0.756 - - - - - - - - - 0.756 polyhomeotic homolog 3, transcript variant X8
86. PXDC1 ENSGALG00000012814 1163 0.752 - - - - - - - - - 0.752 PX domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21361]
87. TOLLIP ENSGALG00000006697 917 0.75 - - - - - - - - - 0.750 toll interacting protein [Source:NCBI gene;Acc:423099]
88. MAT2A ENSGALG00000015366 17 0.75 - - - - - - - - - 0.750 methionine adenosyltransferase 2A, transcript variant X1
89. SNTG1 ENSGALG00000015248 23 0.749 - - - - - 0.749 - - - - syntrophin gamma 1 [Source:HGNC Symbol;Acc:HGNC:13740]
90. APBA3 ENSGALG00000000740 1249 0.749 - - - - - 0.749 - - - - amyloid beta precursor protein binding family A member 3 [Source:HGNC Symbol;Acc:HGNC:580]
91. DMXL2 ENSGALG00000039924 672 0.748 - - - - - - - - - 0.748 Dmx like 2 [Source:HGNC Symbol;Acc:HGNC:2938]
92. KITLG ENSGALG00000011206 71 0.747 - - - - - - - - - 0.747 KIT ligand [Source:NCBI gene;Acc:396028]
93. CCDC170 ENSGALG00000012971 105 0.747 - - - - - - - - - 0.747 coiled-coil domain containing 170 [Source:HGNC Symbol;Acc:HGNC:21177]
94. CHRNB4 ENSGALG00000003005 59 0.746 - - - - - - - - - 0.746 cholinergic receptor nicotinic beta 4 subunit [Source:NCBI gene;Acc:395613]
95. BCL2L15 124 0.742 - - - - - - - - - 0.742 BCL2 like 15
96. CDS1 ENSGALG00000011227 207 0.742 - - - - - - - - - 0.742 CDP-diacylglycerol synthase 1 [Source:HGNC Symbol;Acc:HGNC:1800]
97. HACL1 ENSGALG00000011211 51 0.739 - - - - - - - - - 0.739 2-hydroxyacyl-CoA lyase 1 [Source:NCBI gene;Acc:420638]
98. DCLRE1A ENSGALG00000008938 1351 0.735 - - - - - - - - - 0.735 DNA cross-link repair 1A [Source:NCBI gene;Acc:423902]
99. GCH1 ENSGALG00000012200 445 0.734 - - - - - - - - - 0.734 GTP cyclohydrolase 1 [Source:NCBI gene;Acc:396146]
100. ENSGALG00000026155 ENSGALG00000026155 49 0.733 - - - - - 0.733 - - - -

There are 18 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA