Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CDH12

Gene Name Gene ID Reads Annotation
CDH12 ENSGALG00000012941 223 cadherin 12, transcript variant X8











Genes with expression patterns similar to CDH12

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CDH12 ENSGALG00000012941 223 8 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cadherin 12, transcript variant X8
2. GAP43 ENSGALG00000015089 505 3.068 - - 0.746 - 0.785 - - 0.728 - 0.809 growth associated protein 43 [Source:NCBI gene;Acc:427955]
3. ENSGALG00000006897 ENSGALG00000006897 13 1.816 - - - - - 0.816 - 1.000 - -
4. ATXN3 ENSGALG00000010766 48 1.803 - - - - - - 0.807 0.996 - - ataxin 3 [Source:NCBI gene;Acc:378424]
5. CLVS2 ENSGALG00000014853 22 1.711 - - - - - - - 1.000 - 0.711 clavesin 2 [Source:HGNC Symbol;Acc:HGNC:23046]
6. SYT4 ENSGALG00000042626 384 1.69 - - - - 0.872 - - - - 0.818 synaptotagmin 4 [Source:HGNC Symbol;Acc:HGNC:11512]
7. CHRNA10 ENSGALG00000022702 7 1.623 - - - - - 0.816 0.807 - - - cholinergic receptor, nicotinic, alpha 10 (neuronal) [Source:NCBI gene;Acc:430628]
8. CELF4 ENSGALG00000002413 10 1.609 - - - - - 0.830 - - - 0.779 CUGBP Elav-like family member 4 [Source:HGNC Symbol;Acc:HGNC:14015]
9. SCML4 ENSGALG00000015309 499 1.57 - - 0.710 - - - - - - 0.860 Scm polycomb group protein like 4 [Source:HGNC Symbol;Acc:HGNC:21397]
10. UST ENSGALG00000012345 7 1.553 - - - - - 0.816 - - - 0.737 uronyl 2-sulfotransferase [Source:HGNC Symbol;Acc:HGNC:17223]
11. EFCAB6 ENSGALG00000014188 139 1.552 - - 0.716 - - - - - - 0.836 EF-hand calcium binding domain 6, transcript variant X3
12. ECEL1 ENSGALG00000030420 670 1.53 - - - - - - - - 0.723 0.807 endothelin converting enzyme like 1 [Source:HGNC Symbol;Acc:HGNC:3147]
13. NEFL ENSGALG00000000314 4883 1.516 - - - - 0.714 - - - - 0.802 neurofilament light [Source:HGNC Symbol;Acc:HGNC:7739]
14. MNX1 ENSGALG00000041154 244 1.513 - - 0.787 - - - - - - 0.726 motor neuron and pancreas homeobox 1 [Source:NCBI gene;Acc:395768]
15. ISL1 ENSGALG00000014884 7666 1.494 - - 0.726 - - - - - - 0.768 ISL LIM homeobox 1 [Source:NCBI gene;Acc:396383]
16. STMN2 ENSGALG00000039690 989 1.478 - - - - 0.736 - - - - 0.742 stathmin 2 [Source:NCBI gene;Acc:396095]
17. UTS2D UTS2D 2246 1.476 - - 0.720 - - - - - - 0.756
18. EF1A EF1A 2378 1.464 - - - - 0.721 - - - - 0.743
19. MNR2 ENSGALG00000011349 3340 1.457 - - 0.710 - 0.747 - - - - - homeodomain protein
20. GABRG2 ENSGALG00000038042 211 1.45 - - - - - - - - 0.730 0.720 gamma-aminobutyric acid type A receptor gamma2 subunit [Source:NCBI gene;Acc:396289]
21. LNP1 ENSGALG00000015287 14 1 - - - - - - - 1.000 - - leukemia NUP98 fusion partner 1 [Source:HGNC Symbol;Acc:HGNC:28014]
22. TRPM6 3 1 - - - - - - - 1.000 - - transient receptor potential cation channel subfamily M member 6, transcript variant X3
23. SHISA2 ENSGALG00000043035 1 1 - - - - - - - 1.000 - - shisa family member 2 [Source:NCBI gene;Acc:395162]
24. TBC1D2B ENSGALG00000003322 54 1 - - - - - - - 1.000 - - TBC1 domain family member 2B [Source:HGNC Symbol;Acc:HGNC:29183]
25. IRF8 ENSGALG00000005757 5 1 - - - - - - - 1.000 - - interferon regulatory factor 8 [Source:NCBI gene;Acc:396385]
26. AGBL2 ENSGALG00000029618 8 1 - - - - - - - 1.000 - - ATP/GTP binding protein like 2 [Source:HGNC Symbol;Acc:HGNC:26296]
27. SLC25A12 ENSGALG00000009545 36 1 - - - - - - - 1.000 - - solute carrier family 25 member 12 [Source:HGNC Symbol;Acc:HGNC:10982]
28. GMNC ENSGALG00000026907 6 1 - - - - - - - 1.000 - - geminin coiled-coil domain containing [Source:HGNC Symbol;Acc:HGNC:40049]
29. OPN4-1 ENSGALG00000041662 10 1 - - - - - - - 1.000 - - photopigment melanopsin-like [Source:NCBI gene;Acc:395334]
30. YPEL2 ENSGALG00000028801 1 1 - - - - - - - 1.000 - - yippee like 2 [Source:NCBI gene;Acc:417632]
31. ENSGALG00000005578 ENSGALG00000005578 16 1 - - - - - - - 1.000 - -
32. SGCG ENSGALG00000017122 13 1 - - - - - - - 1.000 - - sarcoglycan gamma [Source:HGNC Symbol;Acc:HGNC:10809]
33. AQP11 ENSGALG00000031734 4 1 - - - - - - - 1.000 - - aquaporin 11 [Source:HGNC Symbol;Acc:HGNC:19940]
34. ENSGALG00000023305 ENSGALG00000023305 168 1 - - - - - - - 1.000 - -
35. ADORA1 ENSGALG00000000168 43 1 - - - - - - - 1.000 - - adenosine A1 receptor [Source:NCBI gene;Acc:374212]
36. SCUBE2 ENSGALG00000032161 63 1 - - - - - - - 1.000 - - signal peptide, CUB domain and EGF like domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30425]
37. NPDC1 ENSGALG00000042635 12 1 - - - - - - - 1.000 - - neural proliferation, differentiation and control 1 [Source:HGNC Symbol;Acc:HGNC:7899]
38. PROK1 ENSGALG00000040082 34 1 - - - - - - - 1.000 - - prokineticin 1 [Source:HGNC Symbol;Acc:HGNC:18454]
39. ENSGALG00000024397 ENSGALG00000024397 2 1 - - - - - - - 1.000 - -
40. TRPM8 ENSGALG00000004116 2 1 - - - - - - - 1.000 - - transient receptor potential cation channel subfamily M member 8 [Source:NCBI gene;Acc:424025]
41. CD1A1 CD1A1 12 1 - - - - - - - 1.000 - -
42. TROVE2 ENSGALG00000002504 14 1 - - - - - - - 1.000 - - TROVE domain family member 2 [Source:HGNC Symbol;Acc:HGNC:11313]
43. ENSGALG00000028196 ENSGALG00000028196 8 1 - - - - - - - 1.000 - -
44. Mar-03 Mar-03 45 1 - - - - - - - 1.000 - -
45. TIAM1 ENSGALG00000015842 17 1 - - - - - - - 1.000 - - T cell lymphoma invasion and metastasis 1 [Source:HGNC Symbol;Acc:HGNC:11805]
46. RAB3GAP2 ENSGALG00000009503 36 1 - - - - - - - 1.000 - - RAB3 GTPase activating non-catalytic protein subunit 2 [Source:NCBI gene;Acc:421343]
47. ENSGALG00000016601 ENSGALG00000016601 16 1 - - - - - - - 1.000 - -
48. VPS37C ENSGALG00000038541 169 1 - - - - - - - 1.000 - - VPS37C, ESCRT-I subunit [Source:NCBI gene;Acc:423023]
49. LOC422926 ENSGALG00000027090 16 1 - - - - - - - 1.000 - - uncharacterized LOC422926
50. ENSGALG00000027473 ENSGALG00000027473 0 1 - - - - - - - 1.000 - -
51. LOC420992 ENSGALG00000013430 126 1 - - - - - - - 1.000 - - LOC420992, transcript variant X6
52. SV2C ENSGALG00000014967 7 1 - - - - - - - 1.000 - - synaptic vesicle glycoprotein 2C [Source:HGNC Symbol;Acc:HGNC:30670]
53. FOXN1 ENSGALG00000043868 3 1 - - - - - - - 1.000 - - forkhead box N1 [Source:HGNC Symbol;Acc:HGNC:12765]
54. LRRC43 LRRC43 16 1 - - - - - - - 1.000 - -
55. USP49 ENSGALG00000003461 10 1 - - - - - - - 1.000 - - ubiquitin specific peptidase 49 [Source:HGNC Symbol;Acc:HGNC:20078]
56. NUDT3 ENSGALG00000002830 7 1 - - - - - - - 1.000 - - nudix hydrolase 3 [Source:NCBI gene;Acc:419905]
57. SLC24A5 ENSGALG00000004885 8 1 - - - - - - - 1.000 - - solute carrier family 24 member 5 [Source:NCBI gene;Acc:415431]
58. ATP12A ENSGALG00000006469 7 1 - - - - - - - 1.000 - - ATPase H+/K+ transporting non-gastric alpha2 subunit [Source:NCBI gene;Acc:419743]
59. ENSGALG00000004904 ENSGALG00000004904 237 1 - - - - - - - 1.000 - -
60. CYTH4 ENSGALG00000012454 12 1 - - - - - - - 1.000 - - cytohesin 4 [Source:NCBI gene;Acc:418043]
61. TINAG ENSGALG00000016300 5 1 - - - - - - - 1.000 - - tubulointerstitial nephritis antigen [Source:NCBI gene;Acc:421888]
62. PPP1R16B ENSGALG00000003568 25 1 - - - - - - - 1.000 - - protein phosphatase 1 regulatory subunit 16B [Source:NCBI gene;Acc:419170]
63. INTS3 8 1 - - - - - - - 1.000 - - integrator complex subunit 3, transcript variant X2
64. ENSGALG00000027018 ENSGALG00000027018 12 0.996 - - - - - - - 0.996 - -
65. PIGH ENSGALG00000009510 13 0.984 - - - - - - - 0.984 - - phosphatidylinositol glycan anchor biosynthesis class H [Source:NCBI gene;Acc:423271]
66. NR3C1 ENSGALG00000032992 4 0.984 - - - - - - - 0.984 - - nuclear receptor subfamily 3 group C member 1 [Source:NCBI gene;Acc:416343]
67. ENSGALG00000010883 ENSGALG00000010883 10 0.984 - - - - - - - 0.984 - -
68. ENSGALG00000010272 ENSGALG00000010272 19 0.984 - - - - - - - 0.984 - -
69. ACOT2L ENSGALG00000023243 3 0.984 - - - - - - - 0.984 - - acyl-coenzyme A thioesterase 2, mitochondrial-like
70. PKN2 ENSGALG00000006237 37 0.984 - - - - - - - 0.984 - - protein kinase N2 [Source:HGNC Symbol;Acc:HGNC:9406]
71. DDX43 ENSGALG00000015928 6 0.954 - - - - - - - 0.954 - - DEAD-box helicase 43
72. SEC14L5 ENSGALG00000045758 25 0.951 - - - - - - - 0.951 - - SEC14 like lipid binding 5 [Source:HGNC Symbol;Acc:HGNC:29032]
73. PPP1R26 ENSGALG00000002489 45 0.951 - - - - - - - 0.951 - - protein phosphatase 1 regulatory subunit 26 [Source:HGNC Symbol;Acc:HGNC:29089]
74. SRGAP2 ENSGALG00000000816 97 0.942 - - - - - - - 0.942 - - SLIT-ROBO Rho GTPase activating protein 2, transcript variant X11
75. SERPINB14 SERPINB14 196 0.935 - - - - - 0.935 - - - -
76. C15orf26 C15orf26 21 0.935 - - - - - - - 0.935 - -
77. HDAC9 ENSGALG00000010854 49 0.935 - - - - - - - 0.935 - - histone deacetylase 9 [Source:NCBI gene;Acc:420599]
78. CPXM2 ENSGALG00000009693 23 0.914 - - - - - - - 0.914 - - carboxypeptidase X, M14 family member 2 [Source:HGNC Symbol;Acc:HGNC:26977]
79. TRIM25 ENSGALG00000003144 12 0.909 - - - - - - - 0.909 - - Gallus gallus tripartite motif containing 25 (TRIM25), mRNA. [Source:RefSeq mRNA;Acc:NM_001318458]
80. RIBC2 ENSGALG00000014232 13 0.881 - - - - - - - 0.881 - - RIB43A domain with coiled-coils 2 [Source:HGNC Symbol;Acc:HGNC:13241]
81. FABP5 ENSGALG00000041344 3984 0.86 - - - - - - - - - 0.860 fatty acid binding protein 5 [Source:NCBI gene;Acc:420197]
82. PCSK1 ENSGALG00000014681 73 0.859 - - - - - - - 0.859 - - proprotein convertase subtilisin/kexin type 1 [Source:HGNC Symbol;Acc:HGNC:8743]
83. BAI3 BAI3 106 0.853 - - - - - - - - - 0.853
84. RTN1 ENSGALG00000012006 2438 0.85 - - - - - - - - - 0.850 reticulon 1 [Source:NCBI gene;Acc:378791]
85. ENSGALG00000020719 ENSGALG00000020719 25 0.847 - - - - - - - 0.847 - -
86. IFNAR1 ENSGALG00000030363 22 0.847 - - - - - - - 0.847 - - interferon alpha and beta receptor subunit 1 [Source:NCBI gene;Acc:395665]
87. SBSPONL ENSGALG00000005862 129 0.847 - - - - - - - 0.847 - - somatomedin B and thrombospondin type 1 domain containing like [Source:NCBI gene;Acc:416923]
88. GALNT14 ENSGALG00000009078 126 0.837 - - - - - - - 0.837 - - polypeptide N-acetylgalactosaminyltransferase 14 [Source:HGNC Symbol;Acc:HGNC:22946]
89. ASS1 ENSGALG00000023689 327 0.837 - - - - - - - 0.837 - - argininosuccinate synthase 1 [Source:NCBI gene;Acc:417185]
90. FGL1 ENSGALG00000013606 42 0.832 - - - - - - - 0.832 - - fibrinogen like 1 [Source:NCBI gene;Acc:422728]
91. gga-mir-1458 ENSGALG00000030959 41 0.832 - - - - - - 0.832 - - - gga-mir-1458 [Source:miRBase;Acc:MI0007063]
92. AMPD1 ENSGALG00000002082 228 0.83 - - - - - - - - - 0.830 adenosine monophosphate deaminase 1 [Source:HGNC Symbol;Acc:HGNC:468]
93. SNAP25 ENSGALG00000009003 222 0.821 - - - - - - - - - 0.821 synaptosome associated protein 25 [Source:NCBI gene;Acc:396444]
94. MAP1B ENSGALG00000014999 6288 0.819 - - - - - - - - - 0.819 microtubule associated protein 1B
95. ASTN1 ENSGALG00000004472 855 0.818 - - - - - - - - - 0.818 astrotactin 1 [Source:HGNC Symbol;Acc:HGNC:773]
96. FABP7 ENSGALG00000038933 6780 0.818 - - - - - - - - - 0.818 fatty acid binding protein 7 [Source:NCBI gene;Acc:396246]
97. ENSGALG00000014037 ENSGALG00000014037 3 0.816 - - - - - 0.816 - - - -
98. WWTR1 ENSGALG00000010412 5 0.816 - - - - - 0.816 - - - - WW domain containing transcription regulator 1 [Source:HGNC Symbol;Acc:HGNC:24042]
99. RAP2C ENSGALG00000006061 11 0.816 - - - - - 0.816 - - - - RAP2C, member of RAS oncogene family [Source:NCBI gene;Acc:422232]
100. HK3 ENSGALG00000027287 20 0.816 - - - - - 0.816 - - - - hexokinase 3, transcript variant X3

There are 178 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA