Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CDH11

Gene Name Gene ID Reads Annotation
CDH11 ENSGALG00000039985 18212 cadherin 11 [Source:NCBI gene;Acc:415797]











Genes with expression patterns similar to CDH11

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CDH11 ENSGALG00000039985 18212 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cadherin 11 [Source:NCBI gene;Acc:415797]
2. COL5A2 ENSGALG00000031112 18358 1.643 - - - - - 0.788 0.855 - - - collagen type V alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2210]
3. HAPLN1 ENSGALG00000015627 14942 1.552 - - - - - - 0.801 - - 0.751 hyaluronan and proteoglycan link protein 1 [Source:NCBI gene;Acc:396475]
4. ANO1 ENSGALG00000041808 5149 1.533 - - - - - 0.772 0.761 - - - anoctamin 1 [Source:HGNC Symbol;Acc:HGNC:21625]
5. MYO1B ENSGALG00000007712 8755 1.518 - - - - - - 0.782 - - 0.736 myosin IB [Source:HGNC Symbol;Acc:HGNC:7596]
6. SMAD6 ENSGALG00000025898 3144 1.506 - - - - - - 0.780 - 0.726 - SMAD family member 6 [Source:NCBI gene;Acc:374096]
7. MRVI1 ENSGALG00000005632 450 1.481 - - 0.761 - - - 0.720 - - - murine retrovirus integration site 1 homolog [Source:HGNC Symbol;Acc:HGNC:7237]
8. TNRC18 ENSGALG00000040770 4061 1.464 - - 0.728 - - - 0.736 - - - trinucleotide repeat containing 18 [Source:HGNC Symbol;Acc:HGNC:11962]
9. CLMP ENSGALG00000006507 8079 1.464 - - - - 0.755 0.709 - - - - CXADR like membrane protein [Source:HGNC Symbol;Acc:HGNC:24039]
10. HLX ENSGALG00000037257 5834 1.452 - - - - - - 0.720 - 0.732 - H2.0 like homeobox [Source:HGNC Symbol;Acc:HGNC:4978]
11. PTPRK ENSGALG00000037423 3688 1.429 - - - - - - 0.719 - 0.710 - protein tyrosine phosphatase, receptor type K [Source:HGNC Symbol;Acc:HGNC:9674]
12. MYL9 ENSGALG00000028567 36256 0.887 - - - - - - 0.887 - - - myosin, light chain 9, regulatory [Source:NCBI gene;Acc:396215]
13. TGFB2 ENSGALG00000009612 10223 0.869 - - - - - - - - 0.869 - transforming growth factor beta 2 [Source:NCBI gene;Acc:421352]
14. DSP ENSGALG00000012790 17884 0.867 - - - - - - 0.867 - - - desmoplakin [Source:HGNC Symbol;Acc:HGNC:3052]
15. PITX2 ENSGALG00000042492 20419 0.836 - - - - - - 0.836 - - - paired like homeodomain 2 [Source:NCBI gene;Acc:395862]
16. COL4A5 ENSGALG00000008141 15874 0.819 - - - - - - - - 0.819 - collagen type IV alpha 5 chain [Source:HGNC Symbol;Acc:HGNC:2207]
17. KIF26A ENSGALG00000011581 11285 0.817 - - - - - - 0.817 - - - kinesin family member 26A [Source:HGNC Symbol;Acc:HGNC:20226]
18. SCCPDH ENSGALG00000010641 8624 0.815 - - - - - - 0.815 - - - saccharopine dehydrogenase (putative) [Source:NCBI gene;Acc:421485]
19. SKAP2 ENSGALG00000030081 13746 0.811 - - - - - - 0.811 - - - src kinase associated phosphoprotein 2 [Source:HGNC Symbol;Acc:HGNC:15687]
20. GGNBP2 ENSGALG00000005397 2226 0.811 - - - - - - 0.811 - - - gametogenetin binding protein 2 [Source:NCBI gene;Acc:425053]
21. GPC3 ENSGALG00000006087 3744 0.809 - - - - - 0.809 - - - - glypican 3 [Source:HGNC Symbol;Acc:HGNC:4451]
22. GTF2IRD1 ENSGALG00000001263 14716 0.807 - - - - - - 0.807 - - - GTF2I repeat domain containing 1 [Source:HGNC Symbol;Acc:HGNC:4661]
23. EPG5 ENSGALG00000036259 71 0.807 - - 0.807 - - - - - - - ectopic P-granules autophagy protein 5 homolog [Source:HGNC Symbol;Acc:HGNC:29331]
24. HAND1 ENSGALG00000035104 2351 0.804 - - - - - - 0.804 - - - heart and neural crest derivatives expressed 1 [Source:NCBI gene;Acc:395812]
25. MTMR9 ENSGALG00000016649 2055 0.803 - - 0.803 - - - - - - - myotubularin related protein 9 [Source:NCBI gene;Acc:422033]
26. COL18A1 ENSGALG00000038311 11934 0.802 - - - - - - 0.802 - - - collagen type XVIII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2195]
27. MARVELD3 ENSGALG00000012886 155 0.799 - - 0.799 - - - - - - - MARVEL domain containing 3
28. FARP1 ENSGALG00000016886 13132 0.799 - - - - - - 0.799 - - - FERM, ARH/RhoGEF and pleckstrin domain protein 1 [Source:NCBI gene;Acc:418781]
29. PLOD2 ENSGALG00000006783 22789 0.797 - - - - 0.797 - - - - - procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 [Source:HGNC Symbol;Acc:HGNC:9082]
30. HES1 ENSGALG00000028015 6818 0.796 - - - - - - 0.796 - - - hes family bHLH transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:5192]
31. SPARC ENSGALG00000004184 36410 0.796 - - - - - - 0.796 - - - secreted protein acidic and cysteine rich [Source:NCBI gene;Acc:386571]
32. BMP5 ENSGALG00000016293 2119 0.795 - - - - - - 0.795 - - - bone morphogenetic protein 5 [Source:NCBI gene;Acc:396053]
33. CRISPLD2 ENSGALG00000032143 2122 0.792 - - - - - - - - 0.792 - cysteine rich secretory protein LCCL domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25248]
34. STRN3 ENSGALG00000040464 9045 0.791 - - - - - - 0.791 - - - striatin 3 [Source:HGNC Symbol;Acc:HGNC:15720]
35. ENSGALG00000024104 ENSGALG00000024104 1051 0.79 - - 0.790 - - - - - - -
36. KLF2 ENSGALG00000003939 759 0.789 - - - - - - 0.789 - - - Kruppel like factor 2 [Source:NCBI gene;Acc:420148]
37. RBPMS ENSGALG00000010291 3663 0.788 - - - - - - 0.788 - - - RNA binding protein, mRNA processing factor [Source:HGNC Symbol;Acc:HGNC:19097]
38. SF3A2 ENSGALG00000021679 12580 0.787 - - - - - - 0.787 - - - splicing factor 3a subunit 2 [Source:NCBI gene;Acc:420077]
39. PKP2 ENSGALG00000012913 2547 0.787 - - - - - - 0.787 - - - plakophilin 2 [Source:HGNC Symbol;Acc:HGNC:9024]
40. CDX1 ENSGALG00000005679 461 0.785 - - - - - 0.785 - - - - caudal type homeobox 1 [Source:NCBI gene;Acc:395397]
41. CDK2AP1 ENSGALG00000034919 5469 0.785 - - - - - - 0.785 - - - cyclin dependent kinase 2 associated protein 1 [Source:NCBI gene;Acc:416826]
42. EHD3 ENSGALG00000009086 14407 0.782 - - - - - - 0.782 - - - EH domain containing 3 [Source:NCBI gene;Acc:421306]
43. ITGB1 ENSGALG00000007145 19551 0.781 - - - - - - 0.781 - - - integrin subunit beta 1 [Source:NCBI gene;Acc:374058]
44. CHST6 ENSGALG00000000913, ENSGALG00000036545 7526 0.78 - - - - - - 0.780 - - - carbohydrate sulfotransferase 6 [Source:NCBI gene;Acc:770257]
45. SSR3 ENSGALG00000028683 24334 0.78 - - - - - - 0.780 - - - signal sequence receptor subunit 3 [Source:NCBI gene;Acc:425027]
46. TBX3 ENSGALG00000036043 2888 0.779 - - - - - - 0.779 - - - T-box 3 [Source:NCBI gene;Acc:374202]
47. NCOA2 ENSGALG00000036017 256 0.778 - - 0.778 - - - - - - - nuclear receptor coactivator 2, transcript variant X9
48. MT-ATP8 MT-ATP8 28754 0.777 - - - - - - - - 0.777 -
49. NRSN1 ENSGALG00000037811 11424 0.777 - - - - - - 0.777 - - - neurensin 1 [Source:HGNC Symbol;Acc:HGNC:17881]
50. GPALPP1 ENSGALG00000031567 4221 0.776 - - - - - - 0.776 - - - GPALPP motifs containing 1 [Source:NCBI gene;Acc:418842]
51. C20orf194 C20orf194 145 0.776 - - 0.776 - - - - - - -
52. PLEKHB2 ENSGALG00000002169 3832 0.775 - - - - - - 0.775 - - - pleckstrin homology domain containing B2 [Source:NCBI gene;Acc:424758]
53. FKBP10 ENSGALG00000025764 7668 0.775 - - - - - - 0.775 - - - FK506 binding protein 10 [Source:HGNC Symbol;Acc:HGNC:18169]
54. MMP2 ENSGALG00000003580 13120 0.772 - - - - - - - - - 0.772 matrix metallopeptidase 2 [Source:NCBI gene;Acc:386583]
55. TMEM17 ENSGALG00000026491 1000 0.769 - - 0.769 - - - - - - - transmembrane protein 17 [Source:NCBI gene;Acc:421284]
56. PHLDB2 ENSGALG00000015377 8560 0.769 - - - - - - 0.769 - - - pleckstrin homology like domain family B member 2 [Source:HGNC Symbol;Acc:HGNC:29573]
57. SNCAIP ENSGALG00000005330 2425 0.769 - - - - - - 0.769 - - - synuclein alpha interacting protein [Source:HGNC Symbol;Acc:HGNC:11139]
58. AKR1D1 ENSGALG00000012834 15183 0.768 - - - - - - 0.768 - - - aldo-keto reductase family 1 member D1 [Source:NCBI gene;Acc:418107]
59. SOX18 ENSGALG00000034118 5453 0.767 - - - - - - 0.767 - - - SRY-box 18 [Source:NCBI gene;Acc:374200]
60. SPCS3 ENSGALG00000010839 19106 0.767 - - - - - - 0.767 - - - signal peptidase complex subunit 3 [Source:NCBI gene;Acc:396234]
61. PPP1R17 ENSGALG00000036390 2418 0.765 - - - - 0.765 - - - - - protein phosphatase 1 regulatory subunit 17 [Source:HGNC Symbol;Acc:HGNC:16973]
62. SH3BGRL3 ENSGALG00000038536 18187 0.765 - - - - - - 0.765 - - - SH3 domain binding glutamate rich protein like 3 [Source:NCBI gene;Acc:768795]
63. TUBB6 ENSGALG00000031275 17690 0.765 - - - - - - 0.765 - - - tubulin beta 6 class V [Source:NCBI gene;Acc:421037]
64. PKP1 ENSGALG00000000299 155 0.764 - - 0.764 - - - - - - - plakophilin 1 [Source:HGNC Symbol;Acc:HGNC:9023]
65. SUPT6H ENSGALG00000000146 131 0.763 - - 0.763 - - - - - - - SPT6 homolog, histone chaperone [Source:HGNC Symbol;Acc:HGNC:11470]
66. FGFR2 ENSGALG00000009495 15391 0.762 - - - - - - 0.762 - - - fibroblast growth factor receptor 2 [Source:NCBI gene;Acc:396259]
67. ADI1 ENSGALG00000025796 8636 0.762 - - - - - - 0.762 - - - acireductone dioxygenase 1 [Source:NCBI gene;Acc:421918]
68. ENSGALG00000001398 ENSGALG00000001398 3248 0.762 - - - - - - 0.762 - - -
69. NDUFAB1 ENSGALG00000006073 40467 0.759 - - - - - - 0.759 - - - NADH:ubiquinone oxidoreductase subunit AB1 [Source:HGNC Symbol;Acc:HGNC:7694]
70. COL1A2 ENSGALG00000009641 46236 0.759 - - - - 0.759 - - - - - collagen type I alpha 2 chain [Source:NCBI gene;Acc:396243]
71. PDZRN3 ENSGALG00000007819 4139 0.758 - - - - - - 0.758 - - - PDZ domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:17704]
72. AHR ENSGALG00000010836 2276 0.757 - - - - - - 0.757 - - - aryl hydrocarbon receptor [Source:NCBI gene;Acc:373907]
73. CIB1 ENSGALG00000008302 13946 0.756 - - - - - - 0.756 - - - calcium and integrin binding 1 [Source:NCBI gene;Acc:770162]
74. RALB ENSGALG00000026493 14590 0.756 - - - - - - 0.756 - - - RAS like proto-oncogene B [Source:HGNC Symbol;Acc:HGNC:9840]
75. FKBP7 ENSGALG00000009149 6742 0.755 - - - - - - 0.755 - - - FK506 binding protein 7 [Source:HGNC Symbol;Acc:HGNC:3723]
76. PTK7 ENSGALG00000008609 8081 0.755 - - - - - - 0.755 - - - protein tyrosine kinase 7 (inactive) [Source:NCBI gene;Acc:421257]
77. UTP11L UTP11L 11927 0.754 - - - - - - 0.754 - - -
78. ISCU ENSGALG00000004869 6852 0.753 - - - - - - 0.753 - - - iron-sulfur cluster assembly enzyme [Source:HGNC Symbol;Acc:HGNC:29882]
79. NSF ENSGALG00000001055 7399 0.753 - - 0.753 - - - - - - - N-ethylmaleimide sensitive factor, vesicle fusing ATPase [Source:NCBI gene;Acc:419972]
80. PLA2G12A ENSGALG00000012185 5261 0.752 - - - - - - 0.752 - - - phospholipase A2 group XIIA [Source:HGNC Symbol;Acc:HGNC:18554]
81. ILK ENSGALG00000031642 11321 0.751 - - - - - - 0.751 - - - integrin linked kinase [Source:NCBI gene;Acc:374018]
82. SERPINF1 ENSGALG00000003015 5123 0.751 - - - - 0.751 - - - - - serpin family F member 1 [Source:NCBI gene;Acc:417561]
83. SNRNP40 ENSGALG00000000615 32298 0.75 - - - - - - 0.750 - - - small nuclear ribonucleoprotein U5 subunit 40 [Source:NCBI gene;Acc:419556]
84. PSMB2 ENSGALG00000026421 51885 0.748 - - - - - - 0.748 - - - proteasome subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:9539]
85. PPP2R5C ENSGALG00000029996 5759 0.747 - - 0.747 - - - - - - - protein phosphatase 2 regulatory subunit B'gamma [Source:NCBI gene;Acc:423460]
86. APOA1 ENSGALG00000007114 10215 0.747 - - - - - - - - 0.747 - apolipoprotein A1 [Source:NCBI gene;Acc:396536]
87. GUK1 ENSGALG00000005336 5134 0.746 - - - - - - 0.746 - - - guanylate kinase 1 [Source:HGNC Symbol;Acc:HGNC:4693]
88. PMPCA ENSGALG00000001950 6766 0.746 - - - - - - 0.746 - - - peptidase, mitochondrial processing alpha subunit [Source:NCBI gene;Acc:417134]
89. SFSWAP ENSGALG00000002487 9977 0.746 - - - - - - - - 0.746 - splicing factor SWAP [Source:HGNC Symbol;Acc:HGNC:10790]
90. SEC63 ENSGALG00000015308 11596 0.745 - - - - - - 0.745 - - - SEC63 homolog, protein translocation regulator [Source:HGNC Symbol;Acc:HGNC:21082]
91. TMEM184C ENSGALG00000010019 7856 0.743 - - - - - - 0.743 - - - transmembrane protein 184C [Source:NCBI gene;Acc:422469]
92. UBE2G2 ENSGALG00000005667 12689 0.743 - - - - - - 0.743 - - - ubiquitin conjugating enzyme E2 G2 [Source:NCBI gene;Acc:424837]
93. RERE ENSGALG00000002232 8724 0.743 - - - - - - 0.743 - - - arginine-glutamic acid dipeptide repeats [Source:HGNC Symbol;Acc:HGNC:9965]
94. LSM14A ENSGALG00000004935 2741 0.742 - - - - - - 0.742 - - - LSM14A, mRNA processing body assembly factor [Source:NCBI gene;Acc:415781]
95. AGPS ENSGALG00000009236 2250 0.741 - - - - - - 0.741 - - - alkylglycerone phosphate synthase [Source:HGNC Symbol;Acc:HGNC:327]
96. DNAJA4 ENSGALG00000036850 6847 0.741 - - - - - - 0.741 - - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
97. EIF4A2 ENSGALG00000008684 58507 0.74 - - - - - - 0.740 - - - eukaryotic translation initiation factor 4A2 [Source:NCBI gene;Acc:395232]
98. BAMBI ENSGALG00000040993 7562 0.74 - - - - - 0.740 - - - - BMP and activin membrane bound inhibitor [Source:NCBI gene;Acc:428413]
99. VEZT ENSGALG00000011357 2476 0.739 - - 0.739 - - - - - - - vezatin, adherens junctions transmembrane protein [Source:HGNC Symbol;Acc:HGNC:18258]
100. LTN1 ENSGALG00000015804 3784 0.737 - - - - - - 0.737 - - - listerin E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:418482]

There are 122 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA