Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CDCA4

Gene Name Gene ID Reads Annotation
CDCA4 ENSGALG00000011692 10381 cell division cycle associated 4 [Source:NCBI gene;Acc:423500]











Genes with expression patterns similar to CDCA4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CDCA4 ENSGALG00000011692 10381 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cell division cycle associated 4 [Source:NCBI gene;Acc:423500]
2. HDAC8 ENSGALG00000004825 12066 1.929 - - - - 0.946 - 0.983 - - - histone deacetylase 8, transcript variant X2
3. Mar-05 Mar-05 6330 1.806 - - - - 0.942 - - 0.864 - -
4. EFTUD2 ENSGALG00000000988 17913 1.752 - - - - - - 0.977 0.775 - - elongation factor Tu GTP binding domain containing 2 [Source:NCBI gene;Acc:428281]
5. CDCA3 ENSGALG00000014513 17047 1.741 - - - - 0.899 - - 0.842 - - cell division cycle associated 3 [Source:NCBI gene;Acc:770517]
6. RPL22 ENSGALG00000000719 74238 1.713 - - - - 0.893 - - 0.820 - - ribosomal protein L22 [Source:NCBI gene;Acc:373937]
7. MARC1 ENSGALG00000009453 5675 1.679 - - - - 0.923 - - 0.756 - - mitochondrial amidoxime reducing component 1 [Source:NCBI gene;Acc:428563]
8. ELOVL5 ENSGALG00000016314 18163 1.664 - - - - 0.811 - - 0.853 - - ELOVL fatty acid elongase 5 [Source:NCBI gene;Acc:428646]
9. DKK3 ENSGALG00000005551 7807 1.628 - - - - 0.897 - - 0.731 - - dickkopf WNT signaling pathway inhibitor 3 [Source:NCBI gene;Acc:396023]
10. DNAJC7 ENSGALG00000042796 14597 0.988 - - - - - - 0.988 - - - DnaJ heat shock protein family (Hsp40) member C7 [Source:NCBI gene;Acc:428312]
11. CNOT6 ENSGALG00000034316 10496 0.988 - - - - - - 0.988 - - - CCR4-NOT transcription complex subunit 6 [Source:HGNC Symbol;Acc:HGNC:14099]
12. DHFR ENSGALG00000026757 18478 0.987 - - - - - - 0.987 - - - dihydrofolate reductase [Source:NCBI gene;Acc:427317]
13. GPC1 ENSGALG00000040316 13364 0.986 - - - - - - 0.986 - - - glypican 1 [Source:NCBI gene;Acc:424770]
14. ARHGAP32 ENSGALG00000043511 7916 0.984 - - - - - - 0.984 - - - Rho GTPase activating protein 32 [Source:HGNC Symbol;Acc:HGNC:17399]
15. RAP1B ENSGALG00000009927 26562 0.984 - - - - - - 0.984 - - - RAP1B, member of RAS oncogene family [Source:NCBI gene;Acc:417840]
16. MCM3 ENSGALG00000016676 16934 0.983 - - - - - - 0.983 - - - minichromosome maintenance complex component 3 [Source:NCBI gene;Acc:422043]
17. FAT1 ENSGALG00000013579 6030 0.983 - - - - - - 0.983 - - - FAT atypical cadherin 1 [Source:HGNC Symbol;Acc:HGNC:3595]
18. RAB12 ENSGALG00000033608 14160 0.983 - - - - - - 0.983 - - - RAB12, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:31332]
19. EIF1B ENSGALG00000038646 9508 0.982 - - - - - - 0.982 - - - eukaryotic translation initiation factor 1B [Source:HGNC Symbol;Acc:HGNC:30792]
20. USPL1 ENSGALG00000017079 6263 0.982 - - - - - - 0.982 - - - ubiquitin specific peptidase like 1 [Source:NCBI gene;Acc:395436]
21. CCNYL1 ENSGALG00000008485 11958 0.982 - - - - - - 0.982 - - - cyclin Y like 1
22. UBE2L3 ENSGALG00000036739 21401 0.982 - - - - - - 0.982 - - - ubiquitin conjugating enzyme E2 L3 [Source:NCBI gene;Acc:416769]
23. FAM192A ENSGALG00000021473 10213 0.982 - - - - - - 0.982 - - - family with sequence similarity 192 member A [Source:NCBI gene;Acc:415647]
24. Sep-06 Sep-06 5961 0.982 - - - - - - 0.982 - - -
25. C9orf64 ENSGALG00000012589 6097 0.982 - - - - - - 0.982 - - - chromosome 9 open reading frame 64 [Source:HGNC Symbol;Acc:HGNC:28144]
26. DAPK3 ENSGALG00000037733 6215 0.982 - - - - - - 0.982 - - - death-associated protein kinase 3, transcript variant X2
27. WDHD1 ENSGALG00000012199 3570 0.982 - - - - - - 0.982 - - - WD repeat and HMG-box DNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:23170]
28. CORO1C ENSGALG00000004901 7055 0.982 - - - - - - 0.982 - - - coronin 1C [Source:NCBI gene;Acc:416893]
29. CTBPL ENSGALG00000007642 14238 0.981 - - - - - - 0.981 - - - C-terminal binding protein-like [Source:NCBI gene;Acc:416354]
30. MATR3 ENSGALG00000002478 12793 0.981 - - - - - - 0.981 - - - matrin 3 [Source:NCBI gene;Acc:373948]
31. ZEB1 ENSGALG00000007260 9277 0.98 - - - - - - 0.980 - - - zinc finger E-box binding homeobox 1 [Source:NCBI gene;Acc:396029]
32. VSX1 ENSGALG00000037576 1517 0.98 - - - - - - 0.980 - - - visual system homeobox 1 [Source:NCBI gene;Acc:395537]
33. IFT20 ENSGALG00000005707 23973 0.98 - - - - - - 0.980 - - - intraflagellar transport 20 [Source:HGNC Symbol;Acc:HGNC:30989]
34. SLC9A3R1 ENSGALG00000007650 13053 0.98 - - - - - - 0.980 - - - SLC9A3 regulator 1 [Source:NCBI gene;Acc:422108]
35. LRPAP1 ENSGALG00000015612 3526 0.98 - - - - - - 0.980 - - - LDL receptor related protein associated protein 1 [Source:NCBI gene;Acc:395936]
36. TMEM18 ENSGALG00000028744 11779 0.979 - - - - - - 0.979 - - - transmembrane protein 18 [Source:NCBI gene;Acc:421911]
37. MCM6 ENSGALG00000012348 12523 0.979 - - - - - - 0.979 - - - minichromosome maintenance complex component 6 [Source:NCBI gene;Acc:424295]
38. RNF141 ENSGALG00000029586 4962 0.979 - - - - - - 0.979 - - - ring finger protein 141 [Source:NCBI gene;Acc:423039]
39. CXCL12 ENSGALG00000041346 4128 0.978 - - - - - - 0.978 - - - C-X-C motif chemokine ligand 12 [Source:NCBI gene;Acc:395180]
40. LRPPRC ENSGALG00000009967 17091 0.978 - - - - - - 0.978 - - - leucine rich pentatricopeptide repeat containing [Source:HGNC Symbol;Acc:HGNC:15714]
41. EIF3D ENSGALG00000012529 40887 0.977 - - - - - - 0.977 - - - eukaryotic translation initiation factor 3 subunit D [Source:HGNC Symbol;Acc:HGNC:3278]
42. C15H12ORF49 C15H12ORF49 13250 0.976 - - - - - - 0.976 - - -
43. HNRNPH3 ENSGALG00000003947 28724 0.973 - - - - - - 0.973 - - - heterogeneous nuclear ribonucleoprotein H3 [Source:NCBI gene;Acc:423686]
44. SMARCE1 ENSGALG00000003882 49063 0.972 - - - - - - 0.972 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:NCBI gene;Acc:420047]
45. INTS4 ENSGALG00000000091 5965 0.97 - - - - - - 0.970 - - - integrator complex subunit 4 [Source:HGNC Symbol;Acc:HGNC:25048]
46. PPIG ENSGALG00000009839 24114 0.969 - - - - - - 0.969 - - - peptidylprolyl isomerase G [Source:HGNC Symbol;Acc:HGNC:14650]
47. ZNF644 ENSGALG00000034253 28348 0.968 - - - - - - 0.968 - - - zinc finger protein 644 [Source:HGNC Symbol;Acc:HGNC:29222]
48. PDLIM4 ENSGALG00000039872 7823 0.965 - - - - - - 0.965 - - - PDZ and LIM domain 4 [Source:NCBI gene;Acc:395643]
49. HNRNPM ENSGALG00000000377 40684 0.954 - - - - - - 0.954 - - - heterogeneous nuclear ribonucleoprotein M [Source:NCBI gene;Acc:420054]
50. RHOT1 ENSGALG00000003397 5149 0.945 - - - - 0.945 - - - - - ras homolog family member T1 [Source:NCBI gene;Acc:417410]
51. UTP6 ENSGALG00000003260 4909 0.942 - - - - 0.942 - - - - - UTP6, small subunit processome component [Source:NCBI gene;Acc:417405]
52. PSMD3 ENSGALG00000033162 25615 0.942 - - - - 0.942 - - - - - proteasome 26S subunit, non-ATPase 3 [Source:NCBI gene;Acc:426133]
53. MYBL2 ENSGALG00000003503 15875 0.942 - - - - 0.942 - - - - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
54. MEF2BNB MEF2BNB 5578 0.941 - - - - 0.941 - - - - -
55. SPEN ENSGALG00000036932 9688 0.94 - - - - 0.940 - - - - - spen family transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:17575]
56. MYO9A ENSGALG00000033618 4505 0.938 - - - - 0.938 - - - - - myosin IXA, transcript variant X10
57. SLMO2 SLMO2 9207 0.938 - - - - 0.938 - - - - -
58. LGALS1 ENSGALG00000012420 13993 0.935 - - - - 0.935 - - - - - galectin 1 [Source:NCBI gene;Acc:396491]
59. SRP19 ENSGALG00000000218 14207 0.935 - - - - 0.935 - - - - - signal recognition particle 19 [Source:HGNC Symbol;Acc:HGNC:11300]
60. COQ5 ENSGALG00000007185 5614 0.934 - - - - 0.934 - - - - - coenzyme Q5, methyltransferase [Source:NCBI gene;Acc:416975]
61. MED21 ENSGALG00000027435 5766 0.933 - - - - 0.933 - - - - - mediator complex subunit 21 [Source:HGNC Symbol;Acc:HGNC:11473]
62. UBE2D3 ENSGALG00000012311 39831 0.933 - - - - 0.933 - - - - - ubiquitin conjugating enzyme E2 D3 [Source:NCBI gene;Acc:422713]
63. IARS2 ENSGALG00000009566 4599 0.933 - - - - 0.933 - - - - - isoleucyl-tRNA synthetase 2, mitochondrial [Source:NCBI gene;Acc:421346]
64. DGKZ ENSGALG00000008380 5389 0.932 - - - - 0.932 - - - - - diacylglycerol kinase zeta [Source:NCBI gene;Acc:423197]
65. CEP78 ENSGALG00000015179 5227 0.932 - - - - 0.932 - - - - - centrosomal protein 78 [Source:HGNC Symbol;Acc:HGNC:25740]
66. TMF1 ENSGALG00000013408 3344 0.932 - - - - 0.932 - - - - - TATA element modulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:11870]
67. SNX14 ENSGALG00000015831 2554 0.93 - - - - 0.930 - - - - - sorting nexin 14 [Source:NCBI gene;Acc:421832]
68. BAHD1 ENSGALG00000033675 1779 0.93 - - - - 0.930 - - - - - bromo adjacent homology domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29153]
69. SFXN5 ENSGALG00000016094 2678 0.93 - - - - 0.930 - - - - - sideroflexin 5 [Source:HGNC Symbol;Acc:HGNC:16073]
70. MED8 ENSGALG00000009993 3095 0.93 - - - - 0.930 - - - - - mediator complex subunit 8 [Source:NCBI gene;Acc:424565]
71. SYNE1 ENSGALG00000013505 2324 0.929 - - - - 0.929 - - - - - spectrin repeat containing, nuclear envelope 1, transcript variant X3
72. LZIC ENSGALG00000002616 9052 0.929 - - - - 0.929 - - - - - leucine zipper and CTNNBIP1 domain containing [Source:NCBI gene;Acc:419445]
73. STARD3NL ENSGALG00000033038 4851 0.929 - - - - 0.929 - - - - - STARD3 N-terminal like [Source:HGNC Symbol;Acc:HGNC:19169]
74. NDUFS4 ENSGALG00000028026 25876 0.929 - - - - 0.929 - - - - - NADH:ubiquinone oxidoreductase subunit S4 [Source:HGNC Symbol;Acc:HGNC:7711]
75. NDUFV1 ENSGALG00000042809 6222 0.928 - - - - 0.928 - - - - - NADH:ubiquinone oxidoreductase core subunit V1 [Source:NCBI gene;Acc:430210]
76. ENSGALG00000027854 ENSGALG00000027854 5007 0.928 - - - - 0.928 - - - - -
77. GTF2H1 ENSGALG00000042340 1553 0.928 - - - - 0.928 - - - - - general transcription factor IIH subunit 1 [Source:NCBI gene;Acc:423081]
78. MRPL16 ENSGALG00000029419 8033 0.928 - - - - 0.928 - - - - - mitochondrial ribosomal protein L16 [Source:HGNC Symbol;Acc:HGNC:14476]
79. BRF1 ENSGALG00000011705 3406 0.928 - - - - 0.928 - - - - - BRF1, RNA polymerase III transcription initiation factor subunit [Source:HGNC Symbol;Acc:HGNC:11551]
80. EDNRA ENSGALG00000010013 2472 0.928 - - - - 0.928 - - - - - endothelin receptor type A [Source:NCBI gene;Acc:373908]
81. GSTO1 ENSGALG00000008409 7561 0.928 - - - - 0.928 - - - - - glutathione S-transferase omega 1 [Source:NCBI gene;Acc:423881]
82. SAP30 ENSGALG00000036252 2032 0.928 - - - - 0.928 - - - - - Sin3A associated protein 30 [Source:HGNC Symbol;Acc:HGNC:10532]
83. PITHD1 ENSGALG00000003986 11470 0.927 - - - - 0.927 - - - - - PITH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25022]
84. USMG5 ENSGALG00000034645 33263 0.927 - - - - 0.927 - - - - - up-regulated during skeletal muscle growth 5 homolog (mouse) [Source:NCBI gene;Acc:423873]
85. NEK6 ENSGALG00000001118 20333 0.927 - - - - 0.927 - - - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
86. LOC426385 ENSGALG00000026301 2703 0.927 - - - - 0.927 - - - - - serine/threonine kinase 35-like, transcript variant X2
87. WDR92 ENSGALG00000008760 3934 0.926 - - - - 0.926 - - - - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
88. PHTF1 ENSGALG00000001845 3276 0.926 - - - - 0.926 - - - - - putative homeodomain transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:8939]
89. CCDC132 CCDC132 2632 0.926 - - - - 0.926 - - - - -
90. TM9SF3 ENSGALG00000005534 15290 0.926 - - - - 0.926 - - - - - transmembrane 9 superfamily member 3
91. RAD54B ENSGALG00000043597 1699 0.926 - - - - 0.926 - - - - - RAD54 homolog B [Source:NCBI gene;Acc:395449]
92. PREP2 PREP2 238 0.925 - - - - 0.925 - - - - -
93. ANKRD9 ENSGALG00000011376 525 0.925 - - - - 0.925 - - - - - ankyrin repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20096]
94. TIMMDC1 ENSGALG00000024480 9337 0.925 - - - - 0.925 - - - - - translocase of inner mitochondrial membrane domain containing 1 [Source:NCBI gene;Acc:418453]
95. ASAP2 ENSGALG00000016419 1393 0.925 - - - - 0.925 - - - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
96. PTK2B ENSGALG00000016564 406 0.925 - - - - 0.925 - - - - - protein tyrosine kinase 2 beta [Source:HGNC Symbol;Acc:HGNC:9612]
97. ETS1 ENSGALG00000001143 7284 0.925 - - - - 0.925 - - - - - v-ets avian erythroblastosis virus E26 oncogene homolog 1 [Source:NCBI gene;Acc:396235]
98. RBM34 ENSGALG00000029915 5618 0.925 - - - - 0.925 - - - - - RNA binding motif protein 34 [Source:HGNC Symbol;Acc:HGNC:28965]
99. RAMP3 ENSGALG00000037246 1187 0.925 - - - - 0.925 - - - - - receptor activity modifying protein 3 [Source:NCBI gene;Acc:420786]
100. PRCC ENSGALG00000040696 9346 0.925 - - - - 0.925 - - - - - proline rich mitotic checkpoint control factor [Source:HGNC Symbol;Acc:HGNC:9343]

There are 231 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA