Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CDC42SE1

Gene Name Gene ID Reads Annotation
CDC42SE1 ENSGALG00000028119 14813 CDC42 small effector 1 [Source:HGNC Symbol;Acc:HGNC:17719]











Genes with expression patterns similar to CDC42SE1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CDC42SE1 ENSGALG00000028119 14813 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 CDC42 small effector 1 [Source:HGNC Symbol;Acc:HGNC:17719]
2. ZFP91 ENSGALG00000007287 13681 1.67 - - - - - - 0.944 - - 0.726 ZFP91 zinc finger protein
3. CAPZB ENSGALG00000004034 19630 0.988 - - - - - - 0.988 - - - capping actin protein of muscle Z-line beta subunit [Source:NCBI gene;Acc:396418]
4. TYMS ENSGALG00000014897 20484 0.979 - - - - - - 0.979 - - - thymidylate synthetase [Source:HGNC Symbol;Acc:HGNC:12441]
5. EIF3E ENSGALG00000037067 36561 0.967 - - - - - - 0.967 - - - eukaryotic translation initiation factor 3 subunit E [Source:NCBI gene;Acc:420272]
6. HSPD1 ENSGALG00000008094 40870 0.967 - - - - - - 0.967 - - - heat shock protein family D (Hsp60) member 1 [Source:NCBI gene;Acc:424059]
7. C5orf22 ENSGALG00000012909 3537 0.959 - - - - - - 0.959 - - - chromosome 5 open reading frame 22 [Source:HGNC Symbol;Acc:HGNC:25639]
8. D1A D1A 1026 0.957 - - - - - - 0.957 - - -
9. GRSF1 2406 0.957 - - - - - - 0.957 - - - G-rich RNA sequence binding factor 1, transcript variant X2
10. MTRR ENSGALG00000039424 3197 0.956 - - - - - - 0.956 - - - 5-methyltetrahydrofolate-homocysteine methyltransferase reductase [Source:HGNC Symbol;Acc:HGNC:7473]
11. PPP2R3B ENSGALG00000016702 1538 0.956 - - - - - - 0.956 - - - protein phosphatase 2 regulatory subunit B''beta, transcript variant X5
12. IRX2 ENSGALG00000013193 2170 0.956 - - - - - - 0.956 - - - iroquois homeobox 2 [Source:NCBI gene;Acc:373975]
13. RBM38 ENSGALG00000026081 7115 0.956 - - - - - - 0.956 - - - RNA binding motif protein 38 [Source:NCBI gene;Acc:768866]
14. NAE1 ENSGALG00000038957 13777 0.956 - - - - - - 0.956 - - - NEDD8 activating enzyme E1 subunit 1 [Source:NCBI gene;Acc:415792]
15. ELP3 ENSGALG00000016624 4483 0.955 - - - - - - 0.955 - - - elongator acetyltransferase complex subunit 3 [Source:NCBI gene;Acc:422021]
16. SUPT4H1 ENSGALG00000000944 8675 0.955 - - - - - - 0.955 - - - SPT4 homolog, DSIF elongation factor subunit [Source:NCBI gene;Acc:417470]
17. ARL14EP ENSGALG00000012139 4690 0.955 - - - - - - 0.955 - - - ADP ribosylation factor like GTPase 14 effector protein [Source:NCBI gene;Acc:421605]
18. HINT3 ENSGALG00000044342 5674 0.955 - - - - - - 0.955 - - - histidine triad nucleotide binding protein 3 [Source:HGNC Symbol;Acc:HGNC:18468]
19. PSIP1 ENSGALG00000015105 8322 0.955 - - - - - - 0.955 - - - PC4 and SFRS1 interacting protein 1 [Source:NCBI gene;Acc:431605]
20. SEC62 ENSGALG00000009379 15745 0.954 - - - - - - 0.954 - - - SEC62 homolog, preprotein translocation factor [Source:NCBI gene;Acc:424993]
21. EPCAM ENSGALG00000008969 10014 0.954 - - - - - - 0.954 - - - epithelial cell adhesion molecule [Source:NCBI gene;Acc:421292]
22. MAP3K4 ENSGALG00000020003 6378 0.954 - - - - - - 0.954 - - - mitogen-activated protein kinase kinase kinase 4 [Source:HGNC Symbol;Acc:HGNC:6856]
23. ZWILCH ENSGALG00000007736 4939 0.953 - - - - - - 0.953 - - - zwilch kinetochore protein [Source:HGNC Symbol;Acc:HGNC:25468]
24. ISY1 ENSGALG00000005012 7477 0.953 - - - - - - 0.953 - - - ISY1 splicing factor homolog
25. FAM72A ENSGALG00000000791 17723 0.952 - - - - - - 0.952 - - - family with sequence similarity 72 member A, transcript variant X1
26. PTRHD1 ENSGALG00000016610 3636 0.948 - - - - - - 0.948 - - - peptidyl-tRNA hydrolase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:33782]
27. ARMC1 ENSGALG00000036567 5476 0.947 - - - - - - 0.947 - - - armadillo repeat containing 1 [Source:NCBI gene;Acc:429406]
28. UBLCP1 ENSGALG00000003672 9332 0.946 - - - - - - 0.946 - - - ubiquitin like domain containing CTD phosphatase 1 [Source:NCBI gene;Acc:416237]
29. BMP7 ENSGALG00000007668 6645 0.945 - - - - - - 0.945 - - - bone morphogenetic protein 7 [Source:HGNC Symbol;Acc:HGNC:1074]
30. PDAP1 ENSGALG00000036552 28881 0.944 - - - - - - 0.944 - - - PDGFA associated protein 1 [Source:HGNC Symbol;Acc:HGNC:14634]
31. GDI2 ENSGALG00000008169 67151 0.933 - - - - - - 0.933 - - - GDP dissociation inhibitor 2 [Source:NCBI gene;Acc:395854]
32. POLR2L ENSGALG00000006841 33915 0.933 - - - - - - 0.933 - - - RNA polymerase II subunit L [Source:NCBI gene;Acc:770704]
33. COX7B ENSGALG00000007863 59194 0.932 - - - - - - 0.932 - - - cytochrome c oxidase subunit 7B [Source:NCBI gene;Acc:771947]
34. RBM5 30998 0.93 - - - - - - 0.930 - - - RNA binding motif protein 5, transcript variant X1
35. DERL2 ENSGALG00000041844 4509 0.924 - - - - - - - 0.924 - - derlin 2 [Source:HGNC Symbol;Acc:HGNC:17943]
36. PNRC1 ENSGALG00000015780 75894 0.924 - - - - - - 0.924 - - - proline rich nuclear receptor coactivator 1 [Source:NCBI gene;Acc:421817]
37. GFOD2 ENSGALG00000001201 5242 0.899 - - - - - - - 0.899 - - glucose-fructose oxidoreductase domain containing 2 [Source:NCBI gene;Acc:415642]
38. MLF2 ENSGALG00000014468 45953 0.899 - - - - - - 0.899 - - - myeloid leukemia factor 2 [Source:NCBI gene;Acc:418284]
39. ETV5 ENSGALG00000005768 9679 0.897 - - - - - - - 0.897 - - ETS variant 5 [Source:NCBI gene;Acc:395749]
40. ARPC2 ENSGALG00000011452 7338 0.894 - - - - - - - 0.894 - - actin related protein 2/3 complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:705]
41. ULK2 ENSGALG00000004727 10729 0.892 - - - - - - - 0.892 - - unc-51 like autophagy activating kinase 2 [Source:HGNC Symbol;Acc:HGNC:13480]
42. RPL27A ENSGALG00000005948 363481 0.886 - - - - - - 0.886 - - - ribosomal protein L27a [Source:NCBI gene;Acc:770018]
43. HSP90B1 ENSGALG00000033789 58910 0.882 - - - - - - 0.882 - - - heat shock protein 90 beta family member 1 [Source:NCBI gene;Acc:374163]
44. LY6E ENSGALG00000041621 16227 0.874 - - - - - - - 0.874 - - lymphocyte antigen 6 family member E [Source:NCBI gene;Acc:395550]
45. HECTD1 ENSGALG00000009946 1946 0.87 - - - - - - - 0.870 - - HECT domain E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:20157]
46. TAX1BP3 ENSGALG00000004618 35172 0.87 - - - - - - 0.870 - - - Tax1 binding protein 3 [Source:HGNC Symbol;Acc:HGNC:30684]
47. DDX47 ENSGALG00000011794 4255 0.866 - - - - - - - 0.866 - - DEAD-box helicase 47 [Source:NCBI gene;Acc:417959]
48. LYPD6B ENSGALG00000028759 831 0.865 - - - - - - - 0.865 - - LY6/PLAUR domain containing 6B [Source:HGNC Symbol;Acc:HGNC:27018]
49. CADM1 ENSGALG00000014582 32973 0.863 - - - - - - - 0.863 - - cell adhesion molecule 1 [Source:HGNC Symbol;Acc:HGNC:5951]
50. RAB35 ENSGALG00000007308 6300 0.853 - - - - - - - 0.853 - - RAB35, member RAS oncogene family [Source:NCBI gene;Acc:416983]
51. OXSR1 ENSGALG00000005979 2905 0.852 - - - - - - - 0.852 - - oxidative stress responsive 1
52. TMEM135 2283 0.852 - - - - - - - 0.852 - - transmembrane protein 135, transcript variant X4
53. FBXO28 ENSGALG00000009331 2871 0.851 - - - - - - - 0.851 - - F-box protein 28 [Source:HGNC Symbol;Acc:HGNC:29046]
54. RPP38 ENSGALG00000008794 1057 0.849 - - - - - - - 0.849 - - ribonuclease P/MRP subunit p38 [Source:NCBI gene;Acc:420530]
55. USP54 ENSGALG00000005232 2749 0.849 - - - - - - - 0.849 - - ubiquitin specific peptidase 54 [Source:HGNC Symbol;Acc:HGNC:23513]
56. IRF2BPL ENSGALG00000041616 2835 0.849 - - - - - - - 0.849 - - interferon regulatory factor 2 binding protein like [Source:HGNC Symbol;Acc:HGNC:14282]
57. AFAP1L2 ENSGALG00000008999 1305 0.849 - - - - - - - 0.849 - - actin filament associated protein 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25901]
58. KIAA1191 ENSGALG00000003370 2599 0.849 - - - - - - - 0.849 - - KIAA1191 [Source:NCBI gene;Acc:416230]
59. TMEM168 ENSGALG00000009443 2452 0.849 - - - - - - - 0.849 - - transmembrane protein 168, transcript variant X1
60. KLF5 ENSGALG00000016927 1080 0.848 - - - - - - - 0.848 - - Kruppel like factor 5 [Source:HGNC Symbol;Acc:HGNC:6349]
61. WDFY1 ENSGALG00000005158 2512 0.848 - - - - - - - 0.848 - - WD repeat and FYVE domain containing 1 [Source:NCBI gene;Acc:424806]
62. AP1S2 ENSGALG00000016551 421 0.848 - - - - - - - 0.848 - - adaptor related protein complex 1 subunit sigma 2 [Source:NCBI gene;Acc:418621]
63. LPAR1 ENSGALG00000015729 3874 0.848 - - - - - - - 0.848 - - lysophosphatidic acid receptor 1 [Source:NCBI gene;Acc:427339]
64. NPHP3 ENSGALG00000034586 1465 0.848 - - - - - - - 0.848 - - nephrocystin 3, transcript variant X1
65. EIF3F ENSGALG00000005326 76059 0.848 - - - - - - 0.848 - - - eukaryotic translation initiation factor 3 subunit F
66. HES5 ENSGALG00000001141 6514 0.848 - - - - - - - 0.848 - - hes family bHLH transcription factor 5 [Source:NCBI gene;Acc:419392]
67. APC ENSGALG00000000220 1266 0.848 - - - - - - - 0.848 - - APC, WNT signaling pathway regulator, transcript variant X12
68. SLC16A2 ENSGALG00000007748 446 0.848 - - - - - - - 0.848 - - Gallus gallus solute carrier family 16 member 2 (SLC16A2), mRNA. [Source:RefSeq mRNA;Acc:NM_001321737]
69. MSC ENSGALG00000037777 1109 0.848 - - - - - - - 0.848 - - musculin [Source:HGNC Symbol;Acc:HGNC:7321]
70. CCM2 ENSGALG00000005612 323 0.848 - - - - - - - 0.848 - - CCM2 scaffold protein [Source:NCBI gene;Acc:420410]
71. C3H6ORF154 C3H6ORF154 1078 0.848 - - - - - - - 0.848 - -
72. RGCC ENSGALG00000016954 1282 0.847 - - - - - - - 0.847 - - regulator of cell cycle [Source:HGNC Symbol;Acc:HGNC:20369]
73. ITPR1 ENSGALG00000008294 1226 0.847 - - - - - - - 0.847 - - inositol 1,4,5-trisphosphate receptor type 1 [Source:NCBI gene;Acc:395412]
74. SLC38A11 ENSGALG00000011052 386 0.847 - - - - - - - 0.847 - - solute carrier family 38 member 11 [Source:HGNC Symbol;Acc:HGNC:26836]
75. TMF1 ENSGALG00000013408 3344 0.847 - - - - - - - 0.847 - - TATA element modulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:11870]
76. LONRF2 ENSGALG00000016768 193 0.847 - - - - - - - 0.847 - - LON peptidase N-terminal domain and ring finger 2 [Source:HGNC Symbol;Acc:HGNC:24788]
77. PIGG ENSGALG00000015349 314 0.847 - - - - - - - 0.847 - - phosphatidylinositol glycan anchor biosynthesis class G [Source:HGNC Symbol;Acc:HGNC:25985]
78. JARID2 ENSGALG00000012702 4280 0.847 - - - - - - - 0.847 - - jumonji and AT-rich interaction domain containing 2 [Source:NCBI gene;Acc:420839]
79. MSANTD1 ENSGALG00000015628 154 0.847 - - - - - - - 0.847 - - Myb/SANT DNA binding domain containing 1 [Source:HGNC Symbol;Acc:HGNC:33741]
80. HSBP1 ENSGALG00000043039 2365 0.847 - - - - - - - 0.847 - - heat shock factor binding protein 1 [Source:NCBI gene;Acc:415813]
81. MAN2A2 ENSGALG00000033790 2717 0.847 - - - - - - - 0.847 - - mannosidase alpha class 2A member 2 [Source:HGNC Symbol;Acc:HGNC:6825]
82. ACSBG2 ENSGALG00000001749 1681 0.847 - - - - - - - 0.847 - - acyl-CoA synthetase bubblegum family member 2 [Source:NCBI gene;Acc:420090]
83. EIF2A ENSGALG00000010401 2201 0.847 - - - - - - - 0.847 - - eukaryotic translation initiation factor 2A [Source:NCBI gene;Acc:425042]
84. CTTN ENSGALG00000007700 709 0.847 - - - - - - - 0.847 - - cortactin [Source:NCBI gene;Acc:396455]
85. UTP20 ENSGALG00000011643 3012 0.846 - - - - - - - 0.846 - - UTP20, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:17897]
86. GOLGA1 ENSGALG00000001025 334 0.846 - - - - - - - 0.846 - - golgin A1 [Source:HGNC Symbol;Acc:HGNC:4424]
87. USP25 ENSGALG00000015693 2567 0.846 - - - - - - - 0.846 - - ubiquitin specific peptidase 25 [Source:HGNC Symbol;Acc:HGNC:12624]
88. TBC1D32 ENSGALG00000014876 681 0.846 - - - - - - - 0.846 - - TBC1 domain family member 32 [Source:HGNC Symbol;Acc:HGNC:21485]
89. CA9 ENSGALG00000021340 1431 0.846 - - - - - - - 0.846 - - carbonic anhydrase 9 [Source:HGNC Symbol;Acc:HGNC:1383]
90. HSD17B2 ENSGALG00000005467 275 0.845 - - - - - - - 0.845 - - hydroxysteroid 17-beta dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:5211]
91. RAB9A ENSGALG00000016579 3262 0.845 - - - - - - - 0.845 - - RAB9A, member RAS oncogene family [Source:NCBI gene;Acc:418635]
92. ATG13 ENSGALG00000008347 7374 0.845 - - - - - - - 0.845 - - autophagy related 13 [Source:HGNC Symbol;Acc:HGNC:29091]
93. ENSGALG00000012564 ENSGALG00000012564 426 0.844 - - - - - - - 0.844 - -
94. DFFA ENSGALG00000002820 2046 0.844 - - - - - - - 0.844 - - DNA fragmentation factor subunit alpha [Source:HGNC Symbol;Acc:HGNC:2772]
95. MGAT4B ENSGALG00000005924 2663 0.844 - - - - - - - 0.844 - - alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B [Source:HGNC Symbol;Acc:HGNC:7048]
96. BFAR ENSGALG00000003111 1778 0.842 - - - - - - - 0.842 - - bifunctional apoptosis regulator [Source:HGNC Symbol;Acc:HGNC:17613]
97. GCN1L1 GCN1L1 4601 0.842 - - - - - - - 0.842 - -
98. BET1 ENSGALG00000024485 2451 0.842 - - - - - - - 0.842 - - Bet1 golgi vesicular membrane trafficking protein [Source:NCBI gene;Acc:420563]
99. NFU1 ENSGALG00000030200 6882 0.842 - - - - - - - 0.842 - - NFU1 iron-sulfur cluster scaffold [Source:NCBI gene;Acc:419513]
100. TATDN1 ENSGALG00000041072 1585 0.841 - - - - - - - 0.841 - - TatD DNase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24220]

There are 103 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA