Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CDC42EP4

Gene Name Gene ID Reads Annotation
CDC42EP4 ENSGALG00000023364 9240 CDC42 effector protein 4 [Source:HGNC Symbol;Acc:HGNC:17147]











Genes with expression patterns similar to CDC42EP4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CDC42EP4 ENSGALG00000023364 9240 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 CDC42 effector protein 4 [Source:HGNC Symbol;Acc:HGNC:17147]
2. gga-mir-6587 ENSGALG00000026386 9441 1.644 - - - - - - 0.758 0.886 - - gga-mir-6587 [Source:miRBase;Acc:MI0022407]
3. IFNAR2 ENSGALG00000041867 1596 1.61 - - - - - - 0.716 0.894 - - interferon alpha and beta receptor subunit 2 [Source:NCBI gene;Acc:395664]
4. MAP2K2 ENSGALG00000001267 3857 1.609 - - - - - - 0.709 0.900 - - mitogen-activated protein kinase kinase 2 [Source:NCBI gene;Acc:396349]
5. ZOV3 ZOV3 3267 0.995 - - - - - - - 0.995 - -
6. GTF2H5 ENSGALG00000013733 12293 0.917 - - - - - - - 0.917 - - general transcription factor IIH subunit 5 [Source:NCBI gene;Acc:769754]
7. XPO5 ENSGALG00000010341 24765 0.903 - - - - - - - 0.903 - - exportin 5 [Source:NCBI gene;Acc:421450]
8. FBF1 ENSGALG00000002179 1738 0.902 - - - - - - - 0.902 - - Fas binding factor 1 [Source:NCBI gene;Acc:770159]
9. ZNF319 ENSGALG00000000999 1272 0.902 - - - - - - - 0.902 - - zinc finger protein 319 [Source:HGNC Symbol;Acc:HGNC:13644]
10. SPDYA ENSGALG00000017392 503 0.902 - - - - - - - 0.902 - - speedy/RINGO cell cycle regulator family member A [Source:HGNC Symbol;Acc:HGNC:30613]
11. ELAVL4 ENSGALG00000010533 4978 0.902 - - - - - - - 0.902 - - ELAV like RNA binding protein 4 [Source:NCBI gene;Acc:395634]
12. PDCD6IP ENSGALG00000033500 580 0.902 - - - - - - - 0.902 - - programmed cell death 6 interacting protein [Source:NCBI gene;Acc:420725]
13. ATP2B4 ENSGALG00000003601 3746 0.902 - - - - - - - 0.902 - - ATPase plasma membrane Ca2+ transporting 4 [Source:HGNC Symbol;Acc:HGNC:817]
14. ENSGALG00000012250 ENSGALG00000012250 581 0.902 - - - - - - - 0.902 - -
15. PIGL ENSGALG00000004492 669 0.902 - - - - - - - 0.902 - - phosphatidylinositol glycan anchor biosynthesis class L, transcript variant X4
16. RNF168 ENSGALG00000006392 507 0.902 - - - - - - - 0.902 - - ring finger protein 168 [Source:HGNC Symbol;Acc:HGNC:26661]
17. TMEM192 ENSGALG00000009528 2428 0.901 - - - - - - - 0.901 - - transmembrane protein 192 [Source:HGNC Symbol;Acc:HGNC:26775]
18. RFT1 ENSGALG00000001945 2446 0.901 - - - - - - - 0.901 - - RFT1 homolog [Source:NCBI gene;Acc:770487]
19. SLC35D1 ENSGALG00000011121 4456 0.901 - - - - - - - 0.901 - - solute carrier family 35 member D1 [Source:HGNC Symbol;Acc:HGNC:20800]
20. RAI2 ENSGALG00000016538 1074 0.901 - - - - - - - 0.901 - - retinoic acid induced 2 [Source:HGNC Symbol;Acc:HGNC:9835]
21. SNIP1 ENSGALG00000002010 1429 0.901 - - - - - - - 0.901 - - Smad nuclear interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:30587]
22. CRELD2 ENSGALG00000008551 2084 0.901 - - - - - - - 0.901 - - cysteine rich with EGF like domains 2 [Source:NCBI gene;Acc:417735]
23. PMP22 ENSGALG00000031425 5358 0.9 - - - - - - - 0.900 - - peripheral myelin protein 22 [Source:NCBI gene;Acc:417327]
24. RNFT1 ENSGALG00000005205 2888 0.9 - - - - - - - 0.900 - - ring finger protein, transmembrane 1 [Source:HGNC Symbol;Acc:HGNC:30206]
25. ALS2 ENSGALG00000008415 2576 0.9 - - - - - - - 0.900 - - ALS2, alsin Rho guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:443]
26. NVL ENSGALG00000009322 5286 0.899 - - - - - - - 0.899 - - nuclear VCP-like [Source:NCBI gene;Acc:421326]
27. C6ORF192 C6ORF192 4224 0.899 - - - - - - - 0.899 - -
28. ATE1 ENSGALG00000009502 3751 0.898 - - - - - - - 0.898 - - arginyltransferase 1 [Source:NCBI gene;Acc:423936]
29. CENPL ENSGALG00000038411 4867 0.898 - - - - - - - 0.898 - - centromere protein L [Source:NCBI gene;Acc:426563]
30. TMEM126A ENSGALG00000014066 6149 0.897 - - - - - - - 0.897 - - transmembrane protein 126A [Source:HGNC Symbol;Acc:HGNC:25382]
31. NBL1 ENSGALG00000040297 8165 0.897 - - - - - - - 0.897 - - neuroblastoma 1, DAN family BMP antagonist [Source:NCBI gene;Acc:373952]
32. FUNDC2 ENSGALG00000029585 9334 0.897 - - - - - - - 0.897 - - FUN14 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24925]
33. TTL ENSGALG00000008614 3991 0.894 - - - - - - - 0.894 - - tubulin tyrosine ligase [Source:NCBI gene;Acc:416711]
34. CETN1 ENSGALG00000026741 7243 0.894 - - - - - - - 0.894 - - centrin 1 [Source:NCBI gene;Acc:422668]
35. RCOR3 ENSGALG00000009871 7022 0.894 - - - - - - - 0.894 - - REST corepressor 3 [Source:NCBI gene;Acc:421380]
36. DLC1 ENSGALG00000013715 5297 0.894 - - - - - - - 0.894 - - DLC1 Rho GTPase activating protein [Source:HGNC Symbol;Acc:HGNC:2897]
37. CRNKL1 ENSGALG00000008429 7280 0.893 - - - - - - - 0.893 - - crooked neck pre-mRNA splicing factor 1 [Source:HGNC Symbol;Acc:HGNC:15762]
38. PPP3R1 ENSGALG00000023648 3417 0.892 - - - - - - - 0.892 - - protein phosphatase 3 regulatory subunit B, alpha [Source:NCBI gene;Acc:378804]
39. CDCA7 ENSGALG00000040833 7484 0.891 - - - - - - - 0.891 - - cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]
40. YAF2 ENSGALG00000009540 8452 0.891 - - - - - - - 0.891 - - YY1 associated factor 2 [Source:NCBI gene;Acc:417790]
41. PPM1D ENSGALG00000035610 6530 0.89 - - - - - - - 0.890 - - protein phosphatase, Mg2+/Mn2+ dependent 1D [Source:HGNC Symbol;Acc:HGNC:9277]
42. RBM7 ENSGALG00000007017 8779 0.888 - - - - - - - 0.888 - - RNA binding motif protein 7 [Source:NCBI gene;Acc:419760]
43. G3BP2 ENSGALG00000010882 21129 0.887 - - - - - - - 0.887 - - G3BP stress granule assembly factor 2 [Source:HGNC Symbol;Acc:HGNC:30291]
44. PDHB ENSGALG00000029576 12254 0.885 - - - - - - - 0.885 - - pyruvate dehydrogenase (lipoamide) beta [Source:NCBI gene;Acc:416066]
45. EXO1 ENSGALG00000010748 7572 0.883 - - - - - - - 0.883 - - exonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3511]
46. JSC JSC 7982 0.877 - - - - - - - 0.877 - -
47. KIAA0196 KIAA0196 4011 0.872 - - - - - - - 0.872 - -
48. RFC3 ENSGALG00000017064 7011 0.87 - - - - - - - 0.870 - - replication factor C subunit 3 [Source:NCBI gene;Acc:418907]
49. AP2B1 ENSGALG00000042125 13229 0.87 - - - - - - - 0.870 - - adaptor related protein complex 2 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:563]
50. NUP107 ENSGALG00000009934 2097 0.865 - - - - - - - 0.865 - - nucleoporin 107 [Source:NCBI gene;Acc:101751988]
51. INPP5A ENSGALG00000010493 6769 0.864 - - - - - - - 0.864 - - inositol polyphosphate-5-phosphatase A [Source:HGNC Symbol;Acc:HGNC:6076]
52. COX7A2L ENSGALG00000037996 13646 0.863 - - - - - - - 0.863 - - cytochrome c oxidase subunit 7A2 like [Source:NCBI gene;Acc:421392]
53. GARS ENSGALG00000005694 18264 0.861 - - - - - - - 0.861 - - glycyl-tRNA synthetase [Source:NCBI gene;Acc:428403]
54. SBNO1 ENSGALG00000003392 6731 0.859 - - - - - - - 0.859 - - strawberry notch homolog 1 [Source:NCBI gene;Acc:427694]
55. ATP6V1G1 ENSGALG00000007190 82534 0.857 - - - - - - - 0.857 - - ATPase H+ transporting V1 subunit G1 [Source:NCBI gene;Acc:417249]
56. ANKRD11 ENSGALG00000006222 12327 0.857 - - - - - - - 0.857 - - ankyrin repeat domain 11, transcript variant X2
57. TPD52 ENSGALG00000040167 9891 0.854 - - - - - - - 0.854 - - tumor protein D52 [Source:NCBI gene;Acc:770339]
58. SFT2D1 ENSGALG00000020005 10855 0.854 - - - - - - - 0.854 - - SFT2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21102]
59. XRCC5 ENSGALG00000011492 6802 0.838 - - - - - - - 0.838 - - X-ray repair cross complementing 5 [Source:HGNC Symbol;Acc:HGNC:12833]
60. MRPL54 ENSGALG00000027611 39450 0.828 - - - - - - - 0.828 - - mitochondrial ribosomal protein L54 [Source:HGNC Symbol;Acc:HGNC:16685]
61. PRTG ENSGALG00000037336 34665 0.826 - - - - - - - 0.826 - - protogenin [Source:NCBI gene;Acc:415407]
62. PPA2 ENSGALG00000010582 22301 0.816 - - - - - - - 0.816 - - pyrophosphatase (inorganic) 2 [Source:HGNC Symbol;Acc:HGNC:28883]
63. Sep-02_1 Sep-02_1 19203 0.815 - - - - - - - 0.815 - -
64. DPP7 ENSGALG00000038145 4888 0.813 - - - - 0.813 - - - - - dipeptidyl peptidase 7 [Source:HGNC Symbol;Acc:HGNC:14892]
65. CADM3 ENSGALG00000036925 1753 0.812 - - - - 0.812 - - - - - cell adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:17601]
66. ENSGALG00000017396 ENSGALG00000017396 9028 0.806 - - - - - - - 0.806 - -
67. TNFAIP8L1 ENSGALG00000004266 12611 0.805 - - - - - - - 0.805 - - TNF alpha induced protein 8 like 1 [Source:NCBI gene;Acc:420162]
68. MOCS3 ENSGALG00000007986 308 0.804 - - - - 0.804 - - - - - molybdenum cofactor synthesis 3 [Source:HGNC Symbol;Acc:HGNC:15765]
69. CHD4 ENSGALG00000013565 25695 0.804 - - - - - - - 0.804 - - chromodomain helicase DNA binding protein 4
70. GLT8D1 ENSGALG00000001642 4232 0.803 - - - - 0.803 - - - - - glycosyltransferase 8 domain containing 1 [Source:NCBI gene;Acc:415898]
71. SLC25A39 ENSGALG00000042894 10654 0.803 - - - - - - - 0.803 - - solute carrier family 25 member 39 [Source:HGNC Symbol;Acc:HGNC:24279]
72. FAM98A ENSGALG00000010428 9585 0.802 - - - - - - - 0.802 - - family with sequence similarity 98 member A [Source:NCBI gene;Acc:421458]
73. KCNB1 ENSGALG00000004758 620 0.801 - - - - 0.801 - - - - - potassium voltage-gated channel subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:6231]
74. FAM171B ENSGALG00000002646 837 0.796 - - - - 0.796 - - - - - family with sequence similarity 171 member B [Source:HGNC Symbol;Acc:HGNC:29412]
75. PDIA5 ENSGALG00000011689 6913 0.795 - - - - 0.795 - - - - - protein disulfide isomerase family A member 5 [Source:HGNC Symbol;Acc:HGNC:24811]
76. CIB1 ENSGALG00000008302 13946 0.793 - - - - - - 0.793 - - - calcium and integrin binding 1 [Source:NCBI gene;Acc:770162]
77. KIF21A ENSGALG00000007098 5919 0.791 - - - - 0.791 - - - - - kinesin family member 21A [Source:HGNC Symbol;Acc:HGNC:19349]
78. CLPX ENSGALG00000007289 6348 0.789 - - - - - - 0.789 - - - caseinolytic mitochondrial matrix peptidase chaperone subunit [Source:NCBI gene;Acc:415527]
79. NAT9 ENSGALG00000007723 2098 0.788 - - - - 0.788 - - - - - N-acetyltransferase 9 (putative), transcript variant X7
80. TAC1 ENSGALG00000009737 2211 0.788 - - - - 0.788 - - - - - tachykinin precursor 1 [Source:HGNC Symbol;Acc:HGNC:11517]
81. BBX ENSGALG00000015353 1281 0.785 - - - - 0.785 - - - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
82. PCNP ENSGALG00000015330 15750 0.781 - - - - 0.781 - - - - - PEST proteolytic signal containing nuclear protein [Source:NCBI gene;Acc:418398]
83. KCNC4 ENSGALG00000000400 129 0.779 - - - - 0.779 - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 4, transcript variant X1
84. DUS2 856 0.778 - - - - 0.778 - - - - - dihydrouridine synthase 2, transcript variant X2
85. TMEM70 ENSGALG00000033568 10720 0.777 - - - - - - - 0.777 - - transmembrane protein 70 [Source:NCBI gene;Acc:420188]
86. MCM5 ENSGALG00000012546 18254 0.777 - - - - 0.777 - - - - - minichromosome maintenance complex component 5 [Source:NCBI gene;Acc:418058]
87. CAMLG ENSGALG00000006411 662 0.775 - - - - 0.775 - - - - - calcium modulating ligand [Source:NCBI gene;Acc:395808]
88. PAQR8 ENSGALG00000016675 85 0.775 - - - - 0.775 - - - - - progestin and adipoQ receptor family member 8 [Source:NCBI gene;Acc:422042]
89. CCDC6 ENSGALG00000003165 93 0.774 - - - - 0.774 - - - - - coiled-coil domain containing 6 [Source:NCBI gene;Acc:423666]
90. FKBP7 ENSGALG00000009149 6742 0.774 - - - - - - 0.774 - - - FK506 binding protein 7 [Source:HGNC Symbol;Acc:HGNC:3723]
91. STON2 ENSGALG00000010579 76 0.773 - - - - 0.773 - - - - - stonin 2 [Source:HGNC Symbol;Acc:HGNC:30652]
92. ENSGALG00000023609 ENSGALG00000023609 6933 0.773 - - - - - - - 0.773 - -
93. RNF126 ENSGALG00000042948 4724 0.771 - - - - 0.771 - - - - - ring finger protein 126 [Source:NCBI gene;Acc:420085]
94. MRPL55 5995 0.771 - - - - 0.771 - - - - - mitochondrial ribosomal protein L55
95. CECR1 336 0.771 - - - - 0.771 - - - - - cat eye syndrome chromosome region, candidate 1, transcript variant X2
96. LRPPRC ENSGALG00000009967 17091 0.769 - - - - - - - 0.769 - - leucine rich pentatricopeptide repeat containing [Source:HGNC Symbol;Acc:HGNC:15714]
97. ENSGALG00000001346 ENSGALG00000001346 233 0.769 - - - - 0.769 - - - - -
98. SRSF4 1200 0.769 - - - - 0.769 - - - - - serine and arginine rich splicing factor 4, transcript variant X2
99. PI4KA ENSGALG00000040756 3973 0.769 - - - - 0.769 - - - - - phosphatidylinositol 4-kinase alpha [Source:HGNC Symbol;Acc:HGNC:8983]
100. SPSB3 ENSGALG00000002285 1329 0.768 - - - - 0.768 - - - - - splA/ryanodine receptor domain and SOCS box containing 3 [Source:HGNC Symbol;Acc:HGNC:30629]

There are 130 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA