Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for CDC42BPA

Gene Name Gene ID Reads Annotation
CDC42BPA CDC42BPA 295










Genes with expression patterns similar to CDC42BPA

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. CDC42BPA CDC42BPA 295 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. hspbp1 ENSDARG00000102937 260 2.463 - 0.712 - - - 0.931 0.820 - - HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 [Source:ZFIN;Acc:ZDB-GENE-030219-55]
3. rad21b ENSDARG00000035655 87 1.711 - - - - - 0.891 0.820 - - RAD21 cohesin complex component b [Source:ZFIN;Acc:ZDB-GENE-060503-223]
4. cdk12 ENSDARG00000063726 1220 1.694 - 0.782 - - - 0.912 - - - cyclin-dependent kinase 12 [Source:ZFIN;Acc:ZDB-GENE-081104-294]
5. hcfc1a ENSDARG00000015990, ENSDARG00000111404 59 1.683 - - - - - 0.935 0.748 - - host cell factor C1a [Source:ZFIN;Acc:ZDB-GENE-030912-10]
6. PEG3_40 PEG3_40 186 1.676 - - - - - 0.922 0.754 - -
7. hiat1b ENSDARG00000043055 757 1.668 - - - - - 0.930 0.738 - - hippocampus abundant transcript 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2935]
8. zgc:171566 ENSDARG00000105118 340 1.657 - - - - - 0.887 0.770 - - zgc:171566 [Source:ZFIN;Acc:ZDB-GENE-050309-193]
9. fancd2 ENSDARG00000053574 247 1.636 - - - - - 0.924 0.712 - - FA complementation group D2 [Source:ZFIN;Acc:ZDB-GENE-040116-5]
10. zbtb48 ENSDARG00000039263 251 1.616 - - - - - 0.910 0.706 - - zinc finger and BTB domain containing 48 [Source:ZFIN;Acc:ZDB-GENE-030131-4450]
11. ankrd10b ENSDARG00000004771 654 1.609 - 0.821 - - - 0.788 - - - ankyrin repeat domain 10b [Source:ZFIN;Acc:ZDB-GENE-061013-49]
12. zgc:91860 ENSDARG00000041599, ENSDARG00000110489 669 1.607 - 0.870 - - - 0.737 - - - zgc:91860 [Source:ZFIN;Acc:ZDB-GENE-040704-34]
13. cpeb1a ENSDARG00000045932 81 1.606 - - - - - 0.854 0.752 - - cytoplasmic polyadenylation element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-080723-42]
14. poglut1 ENSDARG00000053463 738 1.591 - - - - - 0.718 0.873 - - protein O-glucosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-051120-24]
15. CR954145.1 CR954145.1 327 1.588 - - - - - 0.814 0.774 - -
16. pknox1.1_1 ENSDARG00000018765 203 1.566 0.724 - - - - 0.842 - - - pbx/knotted 1 homeobox 1.1 [Source:ZFIN;Acc:ZDB-GENE-020122-5]
17. traf4a ENSDARG00000003963, ENSDARG00000109586 1595 1.538 - - - - - 0.754 0.784 - - tnf receptor-associated factor 4a [Source:ZFIN;Acc:ZDB-GENE-040308-1]
18. cacnb4b ENSDARG00000062174 159 1.533 - - - - - 0.823 0.710 - - calcium channel, voltage-dependent, beta 4b subunit [Source:ZFIN;Acc:ZDB-GENE-060421-7907]
19. BX927318.1 ENSDARG00000097713 199 1.529 - - 0.748 - - 0.781 - - -
20. NGEF ENSDARG00000076179 445 1.526 - - - - - 0.765 0.761 - - neuronal guanine nucleotide exchange factor [Source:ZFIN;Acc:ZDB-GENE-130530-794]
21. CCDC115 ENSDARG00000033533, ENSDARG00000109365 353 1.517 - 0.701 - - - 0.816 - - - coiled-coil domain containing 115 [Source:ZFIN;Acc:ZDB-GENE-050227-20]
22. TTC9 ENSDARG00000074363 196 1.511 - - - - - 0.801 0.710 - - tetratricopeptide repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20267]
23. loh12cr1 loh12cr1 346 1.508 - 0.734 - - - 0.774 - - -
24. pole3 ENSDARG00000008551, ENSDARG00000111677, ENSDARG00000114995 485 1.504 - - - - - 0.787 0.717 - - polymerase (DNA directed), epsilon 3 (p17 subunit) [Source:ZFIN;Acc:ZDB-GENE-040426-1773]
25. tesk2 ENSDARG00000061450 261 1.496 - - - - - 0.789 0.707 - - testis associated actin remodelling kinase 2 [Source:ZFIN;Acc:ZDB-GENE-070209-68]
26. bcl9l ENSDARG00000055054 128 1.488 - - - - - 0.736 0.752 - - B cell CLL/lymphoma 9-like [Source:ZFIN;Acc:ZDB-GENE-040927-29]
27. cdipt ENSDARG00000070686 1318 1.479 - - - - - 0.703 0.776 - - CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase) [Source:ZFIN;Acc:ZDB-GENE-040426-2536]
28. bbs7 ENSDARG00000059911 165 1.479 - - - - - 0.757 0.722 - - Bardet-Biedl syndrome 7 [Source:ZFIN;Acc:ZDB-GENE-030219-90]
29. stx12 ENSDARG00000098813 2576 1.478 - 0.768 - - - 0.710 - - - syntaxin 12 [Source:ZFIN;Acc:ZDB-GENE-040625-11]
30. CAMK2G CAMK2G 3537 1.467 - 0.715 - - - 0.752 - - -
31. cxcr7b cxcr7b 2482 1.447 - 0.722 - - - 0.725 - - -
32. glmna ENSDARG00000058267 597 1.444 - 0.702 - - - 0.742 - - - glomulin, FKBP associated protein a [Source:ZFIN;Acc:ZDB-GENE-041114-120]
33. si:dkey-33c12.3 ENSDARG00000057881, ENSDARG00000110707 394 1.44 - - - - - 0.732 0.708 - - si:dkey-33c12.3 [Source:ZFIN;Acc:ZDB-GENE-030131-7320]
34. mir124-3 26 0.962 - - - - - 0.962 - - - microRNA 124-3
35. grik4 ENSDARG00000026753 22 0.962 - - - - - 0.962 - - - glutamate receptor, ionotropic, kainate 4 [Source:ZFIN;Acc:ZDB-GENE-070821-5]
36. KCNJ3_1 KCNJ3_1 30 0.962 - - - - - 0.962 - - -
37. BX323449.2 BX323449.2 50 0.962 - - - - - 0.962 - - -
38. mgat3 mgat3 195 0.959 - - - - - 0.959 - - -
39. TRPC4_1 TRPC4_1 212 0.959 - - - - - 0.959 - - -
40. entpd3 ENSDARG00000035309 263 0.959 - - - - - 0.959 - - - ectonucleoside triphosphate diphosphohydrolase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6186]
41. arf3a ENSDARG00000070539 29 0.958 - - - - - 0.958 - - - ADP-ribosylation factor 3a [Source:ZFIN;Acc:ZDB-GENE-040801-176]
42. atat1 ENSDARG00000004472 700 0.957 - - - - - 0.957 - - - alpha tubulin acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2120]
43. rgs3a ENSDARG00000099746 727 0.956 - - - - - 0.956 - - - regulator of G protein signaling 3a [Source:ZFIN;Acc:ZDB-GENE-040801-150]
44. KCTD14 ENSDARG00000110240 122 0.955 - - - - - 0.955 - - - potassium channel tetramerization domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-120215-239]
45. ENSDARG00000086878 ENSDARG00000086878 332 0.954 - - - - - 0.954 - - -
46. CABZ01073795.1 ENSDARG00000010729 52 0.954 - - - - - 0.954 - - - interferon-induced protein 44 [Source:NCBI gene;Acc:795887]
47. slc8a4a ENSDARG00000055154 90 0.954 - - - - - 0.954 - - - solute carrier family 8 (sodium/calcium exchanger), member 4a [Source:ZFIN;Acc:ZDB-GENE-060110-2]
48. CNTNAP1 ENSDARG00000074524 73 0.954 - - - - - 0.954 - - - contactin associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030916-2]
49. GRIN2B GRIN2B 140 0.954 - - - - - 0.954 - - -
50. nrn1b ENSDARG00000042656 44 0.953 - - - - - 0.953 - - - neuritin 1b [Source:ZFIN;Acc:ZDB-GENE-041010-98]
51. CABZ01030262.1 CABZ01030262.1 11 0.952 - - - - - 0.952 - - -
52. htr3a ENSDARG00000089212 51 0.952 - - - - - 0.952 - - - 5-hydroxytryptamine (serotonin) receptor 3A [Source:ZFIN;Acc:ZDB-GENE-071012-5]
53. BX470254.1_1 ENSDARG00000097402 50 0.952 - - - - - 0.952 - - -
54. ADORA1 ADORA1 8 0.951 - - - - - 0.951 - - -
55. irgf1 ENSDARG00000070774 7 0.951 - - - - - 0.951 - - - immunity-related GTPase family, f1 [Source:ZFIN;Acc:ZDB-GENE-051212-5]
56. retsatl ENSDARG00000034989 41 0.951 - - - - - 0.951 - - - retinol saturase (all-trans-retinol 13,14-reductase) like [Source:ZFIN;Acc:ZDB-GENE-051113-252]
57. zgc:73349 zgc:73349 4 0.951 - - - - - 0.951 - - -
58. CABZ01079192.1 ENSDARG00000101629 23 0.951 - - - - - 0.951 - - - sucrase-isomaltase (alpha-glucosidase) [Source:NCBI gene;Acc:100148922]
59. zgc:193807 ENSDARG00000076652, ENSDARG00000105440 34 0.951 - - - - - 0.951 - - - zgc:193807 [Source:ZFIN;Acc:ZDB-GENE-081022-42]
60. U1_55 U1_55 4 0.951 - - - - - 0.951 - - -
61. pdk2 pdk2 32 0.951 - - - - - 0.951 - - -
62. sdr42e1 ENSDARG00000098838 25 0.951 - - - - - 0.951 - - - short chain dehydrogenase/reductase family 42E, member 1 [Source:ZFIN;Acc:ZDB-GENE-051120-63]
63. ftr03 8 0.951 - - - - - 0.951 - - - finTRIM family, member 3
64. si:dkey-192k22.2 ENSDARG00000095111 4 0.951 - - - - - 0.951 - - - si:dkey-192k22.2 [Source:ZFIN;Acc:ZDB-GENE-090313-219]
65. slc35a5 ENSDARG00000000001 17 0.951 - - - - - 0.951 - - - solute carrier family 35, member A5 [Source:ZFIN;Acc:ZDB-GENE-030616-55]
66. PFKFB1 ENSDARG00000037140 5 0.951 - - - - - 0.951 - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5664]
67. scpp5 ENSDARG00000078622 15 0.951 - - - - - 0.951 - - - secretory calcium-binding phosphoprotein 5 [Source:ZFIN;Acc:ZDB-GENE-090313-256]
68. si:dkey-22o22.2 ENSDARG00000102445 149 0.951 - - - - - 0.951 - - - si:dkey-22o22.2 [Source:ZFIN;Acc:ZDB-GENE-100922-84]
69. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 0.951 - - - - - 0.951 - - - protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
70. si:ch211-282k23.2 ENSDARG00000093591 447 0.951 - - - - - 0.951 - - - si:ch211-282k23.2 [Source:ZFIN;Acc:ZDB-GENE-050420-314]
71. pcdh2g6 9 0.951 - - - - - 0.951 - - - protocadherin 2 gamma 6
72. si:ch211-213a13.2 ENSDARG00000074546, ENSDARG00000093024 5 0.951 - - - - - 0.951 - - - si:ch211-213a13.2 [Source:ZFIN;Acc:ZDB-GENE-050208-551]
73. AL953879.1 AL953879.1 5 0.951 - - - - - 0.951 - - -
74. CABZ01062083.1 CABZ01062083.1 40 0.951 - - - - - 0.951 - - -
75. PLCXD2 ENSDARG00000058200 8 0.951 - - - - - 0.951 - - - phosphatidylinositol-specific phospholipase C, X domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-091204-217]
76. CU062667.1 CU062667.1 4 0.951 - - - - - 0.951 - - -
77. pglyrp5 ENSDARG00000068382, ENSDARG00000112609 120 0.951 - - - - - 0.951 - - - peptidoglycan recognition protein 5 [Source:ZFIN;Acc:ZDB-GENE-050419-71]
78. ATXN1L ENSDARG00000086977 4 0.951 - - - - - 0.951 - - - ataxin 1-like [Source:ZFIN;Acc:ZDB-GENE-090908-1]
79. zgc:154142 ENSDARG00000100792 42 0.951 - - - - - 0.951 - - - zgc:154142 [Source:ZFIN;Acc:ZDB-GENE-070615-2]
80. sgms2 57 0.95 - - - - - 0.950 - - - sphingomyelin synthase 2, transcript variant X1
81. opn4.1 ENSDARG00000007553 66 0.95 - - - - - 0.950 - - - opsin 4.1 [Source:ZFIN;Acc:ZDB-GENE-030314-2]
82. DLK1 60 0.95 - - - - - 0.950 - - - delta like non-canonical Notch ligand 1
83. CAMK1 CAMK1 28 0.95 - - - - - 0.950 - - -
84. CABZ01044814.2 CABZ01044814.2 25711 0.95 - - - - - 0.950 - - -
85. si:ch211-223f7.1 si:ch211-223f7.1 38 0.95 - - - - - 0.950 - - -
86. PARM1 ENSDARG00000114063 58 0.95 - - - - - 0.950 - - - prostate androgen-regulated mucin-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-262]
87. kcng1 ENSDARG00000099038 23 0.95 - - - - - 0.950 - - - potassium voltage-gated channel, subfamily G, member 1 [Source:ZFIN;Acc:ZDB-GENE-080220-5]
88. CT955963.1 ENSDARG00000100370 23 0.95 - - - - - 0.950 - - -
89. msxe msxe 362 0.95 - - - - - 0.950 - - -
90. PKN1 PKN1 42 0.949 - - - - - 0.949 - - -
91. zgc:158291 ENSDARG00000044375, ENSDARG00000111929 621 0.949 - - - - - 0.949 - - - zgc:158291 [Source:ZFIN;Acc:ZDB-GENE-061215-70]
92. zgc:153845 62 0.949 - - - - - 0.949 - - - zgc:153845
93. KLHL14 ENSDARG00000045275 155 0.949 - - - - - 0.949 - - - kelch-like family member 14 [Source:ZFIN;Acc:ZDB-GENE-091204-223]
94. elk1 ENSDARG00000078066 414 0.948 - - - - - 0.948 - - - ELK1, member of ETS oncogene family [Source:ZFIN;Acc:ZDB-GENE-090529-5]
95. nitr3c ENSDARG00000057620, ENSDARG00000077998, ENSDARG00000111724 96 0.948 - - - - - 0.948 - - - novel immune-type receptor 3c [Source:ZFIN;Acc:ZDB-GENE-041001-13]
96. si:rp71-36a1.1 ENSDARG00000095295 13 0.947 - - - - - 0.947 - - - si:rp71-36a1.1 [Source:ZFIN;Acc:ZDB-GENE-050208-407]
97. arl16 ENSDARG00000059498, ENSDARG00000110386 229 0.947 - - - - - 0.947 - - - ADP-ribosylation factor-like 16 [Source:ZFIN;Acc:ZDB-GENE-070410-114]
98. GPC6 GPC6 4 0.947 - - - - - 0.947 - - -
99. AVL9 ENSDARG00000055538 329 0.947 - - - - - 0.947 - - - AVL9 homolog (S. cerevisiase) [Source:ZFIN;Acc:ZDB-GENE-060825-261]
100. zgc:110821 ENSDARG00000077085 210 0.947 - - - - - 0.947 - - - zgc:110821 [Source:ZFIN;Acc:ZDB-GENE-050227-8]

There are 1662 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA