Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CDC40

Gene Name Gene ID Reads Annotation
CDC40 ENSGALG00000015061 6118 cell division cycle 40 [Source:NCBI gene;Acc:421760]











Genes with expression patterns similar to CDC40

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CDC40 ENSGALG00000015061 6118 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cell division cycle 40 [Source:NCBI gene;Acc:421760]
2. DKC1 ENSGALG00000005054 30350 1.793 - - - - - - 0.811 0.982 - - dyskerin pseudouridine synthase 1 [Source:NCBI gene;Acc:422196]
3. PES1 ENSGALG00000007778 12248 1.671 - - - - - - 0.816 0.855 - - pescadillo ribosomal biogenesis factor 1 [Source:HGNC Symbol;Acc:HGNC:8848]
4. CMPK CMPK 9569 1.66 - - - - - - 0.814 0.846 - -
5. OCIAD1 ENSGALG00000014081 12065 1.655 - - - - - - 0.777 0.878 - - OCIA domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16074]
6. PPP2R5D ENSGALG00000040005 6804 1.641 - - - - - - 0.814 0.827 - - protein phosphatase 2 regulatory subunit B'delta [Source:HGNC Symbol;Acc:HGNC:9312]
7. TBC1D1 ENSGALG00000039380 4423 1.619 - - - - - 0.762 - 0.857 - - TBC1 domain family member 1 [Source:NCBI gene;Acc:426162]
8. UBE2B ENSGALG00000032664 6069 1.608 - - - - - - 0.755 0.853 - - ubiquitin conjugating enzyme E2 B [Source:HGNC Symbol;Acc:HGNC:12473]
9. WDR61 ENSGALG00000003221 11352 1.595 - - - - - - 0.757 0.838 - - WD repeat domain 61 [Source:NCBI gene;Acc:415359]
10. PTGFRN ENSGALG00000015464 14584 1.59 - - - - - 0.724 0.866 - - - prostaglandin F2 receptor inhibitor [Source:HGNC Symbol;Acc:HGNC:9601]
11. CASK ENSGALG00000042400 8485 1.587 - - - - - - 0.795 0.792 - - calcium/calmodulin dependent serine protein kinase [Source:HGNC Symbol;Acc:HGNC:1497]
12. DEK ENSGALG00000012684 14179 1.57 - - - - - - 0.727 0.843 - - DEK proto-oncogene [Source:NCBI gene;Acc:420828]
13. ACTN1 ENSGALG00000042458 10477 1.558 - - - - - - 0.777 0.781 - - actinin, alpha 1 [Source:NCBI gene;Acc:373918]
14. TET1 ENSGALG00000031604 13002 1.547 - - - - - - 0.765 0.782 - - tet methylcytosine dioxygenase 1 [Source:HGNC Symbol;Acc:HGNC:29484]
15. C19H17ORF85 C19H17ORF85 2538 1.524 - - - - - 0.713 0.811 - - -
16. ASF1A ENSGALG00000014887 11319 1.518 - - - - - - 0.742 0.776 - - anti-silencing function 1A histone chaperone [Source:NCBI gene;Acc:723780]
17. RAB11A ENSGALG00000007615 9154 1.504 - - - - - 0.709 0.795 - - - RAB11A, member RAS oncogene family [Source:NCBI gene;Acc:415544]
18. ACADS ENSGALG00000007072 2737 1.48 - - - - - - 0.703 0.777 - - acyl-CoA dehydrogenase short chain [Source:NCBI gene;Acc:416969]
19. COX7C ENSGALG00000027963 84312 1.464 - - - - - 0.739 0.725 - - - cytochrome c oxidase subunit 7C [Source:HGNC Symbol;Acc:HGNC:2292]
20. PRKDC ENSGALG00000042469 449 1.456 - - - - - 0.738 - - 0.718 - protein kinase, DNA-activated, catalytic polypeptide [Source:NCBI gene;Acc:395376]
21. FAM177A1 ENSGALG00000010046 4318 1.448 - - - - - 0.730 0.718 - - - family with sequence similarity 177 member A1 [Source:NCBI gene;Acc:423323]
22. TXNDC12 ENSGALG00000010569 13822 0.949 - - - - - - - 0.949 - - thioredoxin domain containing 12 [Source:NCBI gene;Acc:772208]
23. CCNH ENSGALG00000015641 8051 0.921 - - - - - - 0.921 - - - cyclin H [Source:HGNC Symbol;Acc:HGNC:1594]
24. FNBP1L ENSGALG00000005850 9219 0.908 - - - - - - 0.908 - - - formin binding protein 1 like [Source:HGNC Symbol;Acc:HGNC:20851]
25. CRNKL1 ENSGALG00000008429 7280 0.894 - - - - - - 0.894 - - - crooked neck pre-mRNA splicing factor 1 [Source:HGNC Symbol;Acc:HGNC:15762]
26. NAA15 ENSGALG00000009782 18563 0.889 - - - - - - - 0.889 - - N(alpha)-acetyltransferase 15, NatA auxiliary subunit [Source:HGNC Symbol;Acc:HGNC:30782]
27. LAPTM4A ENSGALG00000016479 15973 0.885 - - - - - - 0.885 - - - lysosomal protein transmembrane 4 alpha [Source:NCBI gene;Acc:421959]
28. KIF2C ENSGALG00000010120 8999 0.878 - - - - - - 0.878 - - - kinesin family member 2C, transcript variant X1
29. NCOA4 ENSGALG00000002066 10544 0.876 - - - - - - - 0.876 - - nuclear receptor coactivator 4 [Source:NCBI gene;Acc:423615]
30. DERL1 ENSGALG00000033950 15074 0.874 - - - - - - 0.874 - - - derlin 1 [Source:NCBI gene;Acc:420350]
31. CDC23 ENSGALG00000007610 11945 0.874 - - - - - - 0.874 - - - cell division cycle 23 [Source:HGNC Symbol;Acc:HGNC:1724]
32. RRP1B ENSGALG00000035696 12309 0.874 - - - - - - 0.874 - - - ribosomal RNA processing 1B [Source:NCBI gene;Acc:425237]
33. DGCR2 ENSGALG00000005891 8405 0.874 - - - - - - 0.874 - - - DiGeorge syndrome critical region gene 2 [Source:HGNC Symbol;Acc:HGNC:2845]
34. SNRNP27 ENSGALG00000013883 22212 0.872 - - - - - - 0.872 - - - small nuclear ribonucleoprotein U4/U6.U5 subunit 27 [Source:HGNC Symbol;Acc:HGNC:30240]
35. GALNT1 ENSGALG00000013135 13583 0.87 - - - - - - 0.870 - - - polypeptide N-acetylgalactosaminyltransferase 1 [Source:NCBI gene;Acc:420955]
36. FXR1 ENSGALG00000008864 10250 0.868 - - - - - - 0.868 - - - FMR1 autosomal homolog 1 [Source:NCBI gene;Acc:424968]
37. HSPA4 ENSGALG00000040882 20966 0.867 - - - - - - 0.867 - - - heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
38. GLI3 ENSGALG00000040266 9981 0.867 - - - - - - 0.867 - - - GLI family zinc finger 3 [Source:NCBI gene;Acc:420769]
39. BIRC6 ENSGALG00000010541 7999 0.866 - - - - - - 0.866 - - - baculoviral IAP repeat containing 6 [Source:HGNC Symbol;Acc:HGNC:13516]
40. C1H12ORF23 C1H12ORF23 13234 0.866 - - - - - - 0.866 - - -
41. RSL1D1 ENSGALG00000033690 13638 0.862 - - - - - - 0.862 - - - ribosomal L1 domain containing 1 [Source:NCBI gene;Acc:416416]
42. EGLN1 ENSGALG00000041422 11032 0.861 - - - - - - 0.861 - - - egl-9 family hypoxia inducible factor 1 [Source:HGNC Symbol;Acc:HGNC:1232]
43. TFDP1 ENSGALG00000016823 17019 0.861 - - - - - - 0.861 - - - transcription factor Dp-1 [Source:HGNC Symbol;Acc:HGNC:11749]
44. R3HDM1 ENSGALG00000012246 6580 0.86 - - - - - - 0.860 - - - R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
45. PNPLA4 ENSGALG00000016618 142 0.859 - - - - - 0.859 - - - - patatin like phospholipase domain containing 4 [Source:NCBI gene;Acc:418653]
46. DCAF7 ENSGALG00000000510 8681 0.859 - - - - - - 0.859 - - - DDB1 and CUL4 associated factor 7 [Source:NCBI gene;Acc:771554]
47. RABGGTB ENSGALG00000011388 11654 0.859 - - - - - - 0.859 - - - Rab geranylgeranyltransferase subunit beta [Source:HGNC Symbol;Acc:HGNC:9796]
48. EMC7 ENSGALG00000009637 4969 0.858 - - - - - - - 0.858 - - ER membrane protein complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:24301]
49. C17H9ORF16 C17H9ORF16 7908 0.858 - - - - - - 0.858 - - -
50. IFT81 ENSGALG00000003854 2534 0.857 - - - - - - - 0.857 - - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
51. TMEM30A ENSGALG00000015904 8533 0.857 - - - - - - 0.857 - - - transmembrane protein 30A [Source:NCBI gene;Acc:421861]
52. TRAF7 ENSGALG00000005767 4615 0.857 - - - - - - 0.857 - - - TNF receptor associated factor 7 [Source:NCBI gene;Acc:416555]
53. DCTN6 ENSGALG00000010298 7507 0.857 - - - - - - - 0.857 - - dynactin subunit 6 [Source:NCBI gene;Acc:771257]
54. WDR92 ENSGALG00000008760 3934 0.856 - - - - - - - 0.856 - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
55. UQCC UQCC 5913 0.856 - - - - - - - 0.856 - -
56. ST5 6869 0.856 - - - - - - 0.856 - - - suppression of tumorigenicity 5, transcript variant X1
57. EIF1AY ENSGALG00000016410 6431 0.856 - - - - - - - 0.856 - - eukaryotic translation initiation factor 1A, Y-linked [Source:NCBI gene;Acc:418606]
58. ZEB1 ENSGALG00000007260 9277 0.855 - - - - - - - 0.855 - - zinc finger E-box binding homeobox 1 [Source:NCBI gene;Acc:396029]
59. SOX9 ENSGALG00000004386 14802 0.855 - - - - - - - 0.855 - - SRY (sex determining region Y)-box 9 [Source:NCBI gene;Acc:374148]
60. BCL2L1 ENSGALG00000006211 2490 0.855 - - - - - - - 0.855 - - BCL2 like 1 [Source:NCBI gene;Acc:373954]
61. ATOX1 ENSGALG00000004176 16486 0.855 - - - - - - - 0.855 - - antioxidant 1 copper chaperone [Source:NCBI gene;Acc:770231]
62. CHEK2 ENSGALG00000005695 1558 0.854 - - - - - - - 0.854 - - checkpoint kinase 2 [Source:NCBI gene;Acc:768913]
63. FPGS ENSGALG00000042460 1749 0.854 - - - - - - - 0.854 - - folylpolyglutamate synthase [Source:HGNC Symbol;Acc:HGNC:3824]
64. ANKRD49 ENSGALG00000017210 3247 0.854 - - - - - - - 0.854 - - ankyrin repeat domain 49 [Source:HGNC Symbol;Acc:HGNC:25970]
65. ELP3 ENSGALG00000016624 4483 0.854 - - - - - - - 0.854 - - elongator acetyltransferase complex subunit 3 [Source:NCBI gene;Acc:422021]
66. MED1 ENSGALG00000001708 9556 0.854 - - - - - - - 0.854 - - mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]
67. C20ORF7 C20ORF7 2383 0.854 - - - - - - - 0.854 - -
68. HEXA ENSGALG00000043828 4789 0.854 - - - - - - - 0.854 - - hexosaminidase subunit alpha [Source:NCBI gene;Acc:415320]
69. VPS39 ENSGALG00000008991 4018 0.854 - - - - - - - 0.854 - - VPS39, HOPS complex subunit [Source:NCBI gene;Acc:423230]
70. C4orf46 ENSGALG00000009432 3255 0.853 - - - - - - - 0.853 - - chromosome 4 open reading frame 46 [Source:HGNC Symbol;Acc:HGNC:27320]
71. STXBP3 ENSGALG00000002001 1740 0.853 - - - - - - - 0.853 - - syntaxin binding protein 3 [Source:NCBI gene;Acc:424341]
72. GTF2H1 ENSGALG00000042340 1553 0.853 - - - - - - - 0.853 - - general transcription factor IIH subunit 1 [Source:NCBI gene;Acc:423081]
73. XPOT ENSGALG00000009835 2953 0.853 - - - - - - - 0.853 - - exportin for tRNA [Source:NCBI gene;Acc:417824]
74. PDS5B ENSGALG00000017070 3998 0.853 - - - - - - - 0.853 - - PDS5 cohesin associated factor B [Source:NCBI gene;Acc:418910]
75. SDHA ENSGALG00000013167 6509 0.853 - - - - - - - 0.853 - - succinate dehydrogenase complex flavoprotein subunit A [Source:NCBI gene;Acc:395758]
76. PDIA3 ENSGALG00000008348 4982 0.853 - - - - - - - 0.853 - - protein disulfide isomerase family A member 3 [Source:NCBI gene;Acc:373899]
77. NEK1 ENSGALG00000009683 4305 0.853 - - - - - - - 0.853 - - NIMA related kinase 1 [Source:HGNC Symbol;Acc:HGNC:7744]
78. ENSGALG00000006740 ENSGALG00000006740 30 0.853 - - - - - 0.853 - - - -
79. DUSP3 ENSGALG00000035369 1790 0.853 - - - - - - - 0.853 - - dual specificity phosphatase 3
80. FZD6 ENSGALG00000030626 3336 0.853 - - - - - - - 0.853 - - frizzled class receptor 6 [Source:NCBI gene;Acc:378788]
81. GABARAPL2 ENSGALG00000003208 9195 0.852 - - - - - - 0.852 - - - GABA type A receptor associated protein like 2 [Source:HGNC Symbol;Acc:HGNC:13291]
82. PIK3C2B ENSGALG00000037043 4522 0.852 - - - - - - - 0.852 - - phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta [Source:HGNC Symbol;Acc:HGNC:8972]
83. ARPC5L ENSGALG00000001014 5642 0.852 - - - - - - - 0.852 - - actin related protein 2/3 complex subunit 5 like [Source:HGNC Symbol;Acc:HGNC:23366]
84. ERAL1 ENSGALG00000003995 1114 0.851 - - - - - - - 0.851 - - Era like 12S mitochondrial rRNA chaperone 1 [Source:NCBI gene;Acc:374084]
85. EFNB1 ENSGALG00000036539 2706 0.851 - - - - - - - 0.851 - - ephrin B1 [Source:NCBI gene;Acc:395896]
86. ANKS1B ENSGALG00000011549 440 0.851 - - - - - - - 0.851 - - ankyrin repeat and sterile alpha motif domain containing 1B [Source:NCBI gene;Acc:417927]
87. ERICH1 ENSGALG00000031021 1495 0.851 - - - - - - - 0.851 - - glutamate rich 1 [Source:NCBI gene;Acc:421904]
88. PDE4B ENSGALG00000011094 1871 0.851 - - - - - - - 0.851 - - phosphodiesterase 4B [Source:NCBI gene;Acc:424700]
89. FAM69B ENSGALG00000002437 1253 0.851 - - - - - - - 0.851 - - family with sequence similarity 69 member B [Source:HGNC Symbol;Acc:HGNC:28290]
90. C12orf45 C12orf45 2445 0.851 - - - - - - - 0.851 - -
91. ADAMTSL1 1479 0.85 - - - - - - - 0.850 - - ADAMTS like 1, transcript variant X3
92. MAP9 ENSGALG00000020253 785 0.85 - - - - - - - 0.850 - - microtubule associated protein 9, transcript variant X7
93. CRADD ENSGALG00000011297 1653 0.85 - - - - - - - 0.850 - - CASP2 and RIPK1 domain containing adaptor with death domain [Source:NCBI gene;Acc:417900]
94. DNAJC3 ENSGALG00000016894 9048 0.85 - - - - - - 0.850 - - - DnaJ heat shock protein family (Hsp40) member C3 [Source:NCBI gene;Acc:418787]
95. TARDBP ENSGALG00000002906 24748 0.849 - - - - - - 0.849 - - - TAR DNA binding protein [Source:NCBI gene;Acc:419453]
96. EBNA1BP2 ENSGALG00000009045 17453 0.849 - - - - - - 0.849 - - - EBNA1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:15531]
97. gga-mir-7474 ENSGALG00000033766 5727 0.849 - - - - - 0.849 - - - - gga-mir-7474 [Source:miRBase;Acc:MI0024147]
98. SMC4 ENSGALG00000009553 15715 0.848 - - - - - - 0.848 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
99. KLHDC4 ENSGALG00000037315 9828 0.848 - - - - - - 0.848 - - - kelch domain containing 4 [Source:NCBI gene;Acc:415831]
100. SURF6 ENSGALG00000038413 11178 0.848 - - - - - - - 0.848 - - surfeit 6 [Source:NCBI gene;Acc:417160]

There are 843 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA