Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CDA

Gene Name Gene ID Reads Annotation
CDA ENSGALG00000007382 1544 cytidine deaminase [Source:NCBI gene;Acc:771849]











Genes with expression patterns similar to CDA

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CDA ENSGALG00000007382 1544 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cytidine deaminase [Source:NCBI gene;Acc:771849]
2. SENP2 ENSGALG00000031128 1162 1.612 - - - - - - - 0.909 0.703 - SUMO specific peptidase 2 [Source:HGNC Symbol;Acc:HGNC:23116]
3. SLC35F6 ENSGALG00000016589 5172 1.557 - - - - - - - 0.852 0.705 - solute carrier family 35 member F6 [Source:HGNC Symbol;Acc:HGNC:26055]
4. MPDZ ENSGALG00000005846 3179 0.989 - - - - - - - 0.989 - - multiple PDZ domain protein [Source:NCBI gene;Acc:427360]
5. THNSL2 ENSGALG00000015939 2184 0.985 - - - - - - - 0.985 - - threonine synthase like 2 [Source:HGNC Symbol;Acc:HGNC:25602]
6. DPM2 ENSGALG00000005066 9121 0.973 - - - - - - - 0.973 - - dolichyl-phosphate mannosyltransferase subunit 2, regulatory [Source:NCBI gene;Acc:771539]
7. ARMC1 ENSGALG00000036567 5476 0.965 - - - - - - - 0.965 - - armadillo repeat containing 1 [Source:NCBI gene;Acc:429406]
8. PNPLA8 ENSGALG00000009505 2910 0.937 - - - - - - - 0.937 - - patatin like phospholipase domain containing 8 [Source:NCBI gene;Acc:417785]
9. CYB5R3 ENSGALG00000014122 7664 0.935 - - - - - - - 0.935 - - cytochrome b5 reductase 3 [Source:NCBI gene;Acc:418220]
10. ENSGALG00000019793 ENSGALG00000019793 198 0.93 - - - - - - - - 0.930 -
11. AGO1 ENSGALG00000002249 125 0.921 - - - - - - - 0.921 - - argonaute 1, RISC catalytic component [Source:NCBI gene;Acc:428222]
12. ZNF148 ENSGALG00000012049 365 0.921 - - - - - - - 0.921 - - zinc finger protein 148 [Source:HGNC Symbol;Acc:HGNC:12933]
13. RFX3 ENSGALG00000010179 305 0.921 - - - - - - - 0.921 - - regulatory factor X3 [Source:HGNC Symbol;Acc:HGNC:9984]
14. PRKAG2 ENSGALG00000006219 504 0.921 - - - - - - - 0.921 - - protein kinase AMP-activated non-catalytic subunit gamma 2 [Source:NCBI gene;Acc:420435]
15. ENSGALG00000016701 ENSGALG00000016701 418 0.921 - - - - - - - 0.921 - -
16. ENSGALG00000021835 ENSGALG00000021835 424 0.921 - - - - - - - 0.921 - -
17. CHGA ENSGALG00000010820 1028 0.921 - - - - - - - 0.921 - - chromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]
18. FRYL ENSGALG00000014103 314 0.921 - - - - - - - 0.921 - - FRY like transcription coactivator [Source:HGNC Symbol;Acc:HGNC:29127]
19. GMFB ENSGALG00000012208 894 0.92 - - - - - - - 0.920 - - glia maturation factor beta [Source:NCBI gene;Acc:423560]
20. gga-mir-6681 ENSGALG00000027840 546 0.92 - - - - - - - 0.920 - - gga-mir-6681 [Source:miRBase;Acc:MI0022502]
21. ENSGALG00000026309 ENSGALG00000026309 360 0.919 - - - - - - - 0.919 - -
22. xcc-b100_1894L ENSGALG00000007564 462 0.919 - - - - - - - 0.919 - - UPF0061 protein xcc-b100_1894-like
23. CLEC3B ENSGALG00000030969 363 0.919 - - - - - - - 0.919 - - C-type lectin domain family 3 member B [Source:NCBI gene;Acc:395386]
24. BIN1 ENSGALG00000011541 2273 0.919 - - - - - - - 0.919 - - bridging integrator 1 [Source:NCBI gene;Acc:424228]
25. N4BP2L1 ENSGALG00000017072 1371 0.919 - - - - - - - 0.919 - - NEDD4 binding protein 2 like 1, transcript variant X2
26. LMO4 ENSGALG00000006252 3686 0.918 - - - - - - - 0.918 - - LIM domain only 4 [Source:NCBI gene;Acc:373901]
27. LRRC42 ENSGALG00000010743 384 0.918 - - - - - - - 0.918 - - leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:HGNC:28792]
28. NGFR ENSGALG00000035950 13452 0.918 - - - - - - - 0.918 - - nerve growth factor receptor [Source:NCBI gene;Acc:425805]
29. C16orf93 C16orf93 3351 0.918 - - - - - - - 0.918 - -
30. GHR_1 ENSGALG00000014855 198 0.917 - - - - - - - 0.917 - - growth hormone receptor [Source:NCBI gene;Acc:408184]
31. SZT2 ENSGALG00000028561 255 0.916 - - - - - - - 0.916 - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
32. TBC1D16 ENSGALG00000007054 2324 0.915 - - - - - - - 0.915 - - TBC1 domain family member 16 [Source:HGNC Symbol;Acc:HGNC:28356]
33. ENSGALG00000025773 ENSGALG00000025773 977 0.914 - - - - - - - 0.914 - -
34. ZC3H11A ENSGALG00000000541 2712 0.914 - - - - - - - 0.914 - - zinc finger CCCH-type containing 11A [Source:NCBI gene;Acc:421172]
35. GPR155 ENSGALG00000014209 1281 0.914 - - - - - - - 0.914 - - G protein-coupled receptor 155 [Source:HGNC Symbol;Acc:HGNC:22951]
36. TBC1D19 ENSGALG00000029673 1868 0.913 - - - - - - - 0.913 - - TBC1 domain family member 19 [Source:HGNC Symbol;Acc:HGNC:25624]
37. MAN1A1 ENSGALG00000014878 1061 0.912 - - - - - - - 0.912 - - mannosidase alpha class 1A member 1 [Source:HGNC Symbol;Acc:HGNC:6821]
38. THAP4 ENSGALG00000006283 1707 0.912 - - - - - - - 0.912 - - THAP domain containing 4 [Source:HGNC Symbol;Acc:HGNC:23187]
39. C7H2ORF76 ENSGALG00000012113 1947 0.911 - - - - - - - 0.911 - - chromosome 7 open reading frame, human C2orf76 [Source:NCBI gene;Acc:424274]
40. ALDH6 ALDH6 771 0.911 - - - - - - - 0.911 - -
41. SIAH2 ENSGALG00000010395 2126 0.91 - - - - - - - 0.910 - - siah E3 ubiquitin protein ligase 2 [Source:HGNC Symbol;Acc:HGNC:10858]
42. CCNI ENSGALG00000011457 3203 0.91 - - - - - - - 0.910 - - cyclin I [Source:HGNC Symbol;Acc:HGNC:1595]
43. YY1 ENSGALG00000017388 1933 0.91 - - - - - - - 0.910 - - YY1 transcription factor [Source:NCBI gene;Acc:423455]
44. CDC37L1 ENSGALG00000014448 2283 0.909 - - - - - - - 0.909 - - cell division cycle 37 like 1 [Source:HGNC Symbol;Acc:HGNC:17179]
45. PNPT1 ENSGALG00000043545 1306 0.908 - - - - - - - 0.908 - - polyribonucleotide nucleotidyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:23166]
46. SLC37A4 ENSGALG00000007716 2263 0.908 - - - - - - - 0.908 - - solute carrier family 37 member 4 [Source:HGNC Symbol;Acc:HGNC:4061]
47. MED20 ENSGALG00000003474 4583 0.908 - - - - - - - 0.908 - - mediator complex subunit 20 [Source:NCBI gene;Acc:419926]
48. WBP4 ENSGALG00000016949 5858 0.907 - - - - - - - 0.907 - - WW domain binding protein 4 [Source:NCBI gene;Acc:418829]
49. BOC ENSGALG00000015152 4868 0.907 - - - - - - - 0.907 - - BOC cell adhesion associated, oncogene regulated [Source:HGNC Symbol;Acc:HGNC:17173]
50. IBA57 ENSGALG00000005328 4362 0.907 - - - - - - - 0.907 - - IBA57 homolog, iron-sulfur cluster assembly [Source:NCBI gene;Acc:420396]
51. ASAP2 ENSGALG00000016419 1393 0.906 - - - - - - - 0.906 - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
52. DCP1B 1306 0.906 - - - - - - - - 0.906 - decapping mRNA 1B
53. COQ5 ENSGALG00000007185 5614 0.904 - - - - - - - 0.904 - - coenzyme Q5, methyltransferase [Source:NCBI gene;Acc:416975]
54. ATP6V0E2 ENSGALG00000020754 2648 0.904 - - - - - - - 0.904 - - ATPase H+ transporting V0 subunit e2 [Source:NCBI gene;Acc:769770]
55. SLC4A3 ENSGALG00000011224 2161 0.904 - - - - - - - 0.904 - - solute carrier family 4 member 3 [Source:HGNC Symbol;Acc:HGNC:11029]
56. CLASP2 ENSGALG00000032647 1821 0.903 - - - - - - - 0.903 - - cytoplasmic linker associated protein 2 [Source:NCBI gene;Acc:420724]
57. KIF3B ENSGALG00000006604 2968 0.902 - - - - - - - 0.902 - - kinesin family member 3B [Source:NCBI gene;Acc:419284]
58. GTSE1 ENSGALG00000004897 2865 0.899 - - - - - - - 0.899 - - G2 and S-phase expressed 1 [Source:NCBI gene;Acc:425204]
59. ST14 ENSGALG00000001331 1655 0.899 - - - - - - - 0.899 - - suppression of tumorigenicity 14 [Source:HGNC Symbol;Acc:HGNC:11344]
60. SCARF1 2103 0.899 - - - - - - - 0.899 - - scavenger receptor class F member 1, transcript variant X2
61. ABCC8 ENSGALG00000006172 41 0.898 - - - - - - - - 0.898 - ATP binding cassette subfamily C member 8 [Source:HGNC Symbol;Acc:HGNC:59]
62. HAND1 ENSGALG00000035104 2351 0.896 - - - - - - - 0.896 - - heart and neural crest derivatives expressed 1 [Source:NCBI gene;Acc:395812]
63. CAMK2G ENSGALG00000005088 5037 0.896 - - - - - - - 0.896 - - calcium/calmodulin dependent protein kinase II gamma [Source:HGNC Symbol;Acc:HGNC:1463]
64. ECHDC3 ENSGALG00000006690 1299 0.895 - - - - - - - 0.895 - - enoyl-CoA hydratase domain containing 3 [Source:NCBI gene;Acc:419098]
65. ACTR3B ENSGALG00000006292 2235 0.895 - - - - - - - 0.895 - - ARP3 actin related protein 3 homolog B, transcript variant X1
66. PDCD7 ENSGALG00000021027 3807 0.895 - - - - - - - 0.895 - - programmed cell death 7 [Source:HGNC Symbol;Acc:HGNC:8767]
67. IDS ENSGALG00000009154 1177 0.895 - - - - - - - 0.895 - - iduronate 2-sulfatase [Source:NCBI gene;Acc:422392]
68. TRAPPC12 ENSGALG00000016387 2593 0.893 - - - - - - - 0.893 - - trafficking protein particle complex 12 [Source:HGNC Symbol;Acc:HGNC:24284]
69. FLOT2 ENSGALG00000031216 1003 0.893 - - - - - - - - 0.893 - flotillin 2 [Source:NCBI gene;Acc:417579]
70. CIR1 ENSGALG00000014276 7189 0.893 - - - - - - - 0.893 - - corepressor interacting with RBPJ, 1 [Source:NCBI gene;Acc:426529]
71. FBXL7 ENSGALG00000031947 2480 0.892 - - - - - - - 0.892 - - F-box and leucine rich repeat protein 7 [Source:HGNC Symbol;Acc:HGNC:13604]
72. LOC427439 ENSGALG00000003605 9312 0.892 - - - - - - - 0.892 - - Nipped-B homolog-like, transcript variant X1
73. TTC17 ENSGALG00000039558 3301 0.891 - - - - - - - 0.891 - - tetratricopeptide repeat domain 17
74. PDHX ENSGALG00000033753 2799 0.89 - - - - - - - 0.890 - - pyruvate dehydrogenase complex component X [Source:NCBI gene;Acc:423154]
75. C5H15ORF57 C5H15ORF57 4113 0.889 - - - - - - - 0.889 - -
76. NTL ENSGALG00000005156 278 0.888 - - - - - - - - 0.888 - neurotrypsin-like, transcript variant X7
77. RBM34 ENSGALG00000029915 5618 0.888 - - - - - - - 0.888 - - RNA binding motif protein 34 [Source:HGNC Symbol;Acc:HGNC:28965]
78. ANKRD50 ENSGALG00000011831 2870 0.888 - - - - - - - - 0.888 - ankyrin repeat domain 50 [Source:HGNC Symbol;Acc:HGNC:29223]
79. ENSGALG00000005785 ENSGALG00000005785 1570 0.887 - - - - - - - 0.887 - -
80. CNOT2 ENSGALG00000010042 7612 0.887 - - - - - - - 0.887 - - CCR4-NOT transcription complex subunit 2 [Source:NCBI gene;Acc:417851]
81. TSPAN5 ENSGALG00000012227 8703 0.886 - - - - - - - 0.886 - - tetraspanin 5 [Source:HGNC Symbol;Acc:HGNC:17753]
82. SECISBP2 ENSGALG00000010694 6990 0.886 - - - - - - - 0.886 - - SECIS binding protein 2 [Source:HGNC Symbol;Acc:HGNC:30972]
83. PCLO 249 0.885 - - - - - - - - 0.885 - piccolo presynaptic cytomatrix protein
84. BRF1 ENSGALG00000011705 3406 0.884 - - - - - - - 0.884 - - BRF1, RNA polymerase III transcription initiation factor subunit [Source:HGNC Symbol;Acc:HGNC:11551]
85. SURF2 ENSGALG00000003181 3500 0.884 - - - - - - - 0.884 - - surfeit 2 [Source:NCBI gene;Acc:417156]
86. MMP17 3885 0.884 - - - - - - - 0.884 - - matrix metallopeptidase 17
87. CARS2 ENSGALG00000016847 3814 0.883 - - - - - - - - 0.883 - cysteinyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:25695]
88. RAD17 ENSGALG00000015571 1374 0.882 - - - - - - - - 0.882 - RAD17 checkpoint clamp loader component [Source:NCBI gene;Acc:404778]
89. SEMA3C ENSGALG00000040444 5404 0.881 - - - - - - - 0.881 - - semaphorin 3C [Source:NCBI gene;Acc:374090]
90. PARP3 ENSGALG00000004517 331 0.88 - - - - - - - - 0.880 - poly(ADP-ribose) polymerase family member 3 [Source:HGNC Symbol;Acc:HGNC:273]
91. FAM120B ENSGALG00000011180 101 0.88 - - - - - - - - 0.880 - family with sequence similarity 120B [Source:HGNC Symbol;Acc:HGNC:21109]
92. ABTB1 ENSGALG00000005999 2446 0.878 - - - - - - - 0.878 - - ankyrin repeat and BTB domain containing 1 [Source:NCBI gene;Acc:416026]
93. CCDC75 CCDC75 4865 0.878 - - - - - - - 0.878 - -
94. KLHL15 ENSGALG00000016345 1638 0.878 - - - - - - - - 0.878 - kelch like family member 15 [Source:NCBI gene;Acc:418598]
95. F5 ENSGALG00000029298 1850 0.878 - - - - - - - - 0.878 - coagulation factor V [Source:HGNC Symbol;Acc:HGNC:3542]
96. POLR1E ENSGALG00000005395 8953 0.878 - - - - - - - 0.878 - - RNA polymerase I subunit E [Source:HGNC Symbol;Acc:HGNC:17631]
97. KIAA1217 ENSGALG00000007766 144 0.877 - - - - - - - - 0.877 - KIAA1217 [Source:HGNC Symbol;Acc:HGNC:25428]
98. SH3TC1 ENSGALG00000015568 484 0.875 - - - - - - - - 0.875 - SH3 domain and tetratricopeptide repeats 1 [Source:HGNC Symbol;Acc:HGNC:26009]
99. VDAC2 ENSGALG00000005002 12592 0.874 - - - - - - - 0.874 - - voltage dependent anion channel 2 [Source:NCBI gene;Acc:395498]
100. SMAP2 ENSGALG00000029244 498 0.872 - - - - - - - - 0.872 - small ArfGAP2 [Source:NCBI gene;Acc:419641]

There are 288 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA