Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CD44

Gene Name Gene ID Reads Annotation
CD44 ENSGALG00000039080 100 CD44 molecule (Indian blood group) [Source:NCBI gene;Acc:395666]











Genes with expression patterns similar to CD44

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CD44 ENSGALG00000039080 100 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 CD44 molecule (Indian blood group) [Source:NCBI gene;Acc:395666]
2. HDAC3 ENSGALG00000002634 130 1.689 - - - - 0.859 0.830 - - - - histone deacetylase 3 [Source:NCBI gene;Acc:395506]
3. PQLC3 ENSGALG00000016449 39 1.641 - - 0.872 - - 0.769 - - - - PQ loop repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:28503]
4. ENSGALG00000019522 ENSGALG00000019522 122 1.636 - - 0.908 - - 0.728 - - - -
5. USP44 ENSGALG00000011400 254 1.567 - - 0.818 - - 0.749 - - - - ubiquitin specific peptidase 44 [Source:HGNC Symbol;Acc:HGNC:20064]
6. HCLS1 ENSGALG00000039682 34 1.549 - - - - 0.715 - - - - 0.834 hematopoietic cell-specific Lyn substrate 1 [Source:NCBI gene;Acc:426867]
7. PPL ENSGALG00000002201 13 1.521 - - - - - 0.809 - - - 0.712 periplakin
8. MMR1L2 ENSGALG00000028357 7 0.959 - - 0.959 - - - - - - - Gallus gallus macrophage mannose receptor 1-like 2 (MMR1L2), mRNA. [Source:RefSeq mRNA;Acc:NM_001319010]
9. LOC771308 ENSGALG00000000274 7 0.959 - - 0.959 - - - - - - - growth hormone releasing hormone receptor, transcript variant X2
10. ATMIN ENSGALG00000040475 16 0.959 - - 0.959 - - - - - - - ATM interactor [Source:HGNC Symbol;Acc:HGNC:29034]
11. AOX1 ENSGALG00000008185 14 0.959 - - 0.959 - - - - - - - aldehyde oxidase 1 [Source:NCBI gene;Acc:424071]
12. ADCYAP1 ENSGALG00000014858 9 0.959 - - 0.959 - - - - - - - adenylate cyclase activating polypeptide 1 [Source:NCBI gene;Acc:408251]
13. OSGIN1 ENSGALG00000003323 7 0.959 - - 0.959 - - - - - - - oxidative stress induced growth inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:30093]
14. SGMS2 ENSGALG00000010535 42 0.959 - - 0.959 - - - - - - - sphingomyelin synthase 2 [Source:NCBI gene;Acc:422529]
15. RAB3C ENSGALG00000014726 10 0.959 - - 0.959 - - - - - - - RAB3C, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:30269]
16. TEX33 ENSGALG00000012490 11 0.959 - - 0.959 - - - - - - - testis expressed 33, transcript variant X2
17. FAR-2 FAR-2 24 0.958 - - 0.958 - - - - - - -
18. CLDN15 ENSGALG00000038964 21 0.956 - - 0.956 - - - - - - - claudin 15, transcript variant X4
19. ELFN2 ENSGALG00000012446 11 0.956 - - 0.956 - - - - - - - extracellular leucine rich repeat and fibronectin type III domain containing 2 [Source:HGNC Symbol;Acc:HGNC:29396]
20. FGF7 ENSGALG00000028158 189 0.952 - - 0.952 - - - - - - - fibroblast growth factor 7 [Source:NCBI gene;Acc:415439]
21. PTPRE ENSGALG00000009823 250 0.951 - - 0.951 - - - - - - - protein tyrosine phosphatase, receptor type E [Source:HGNC Symbol;Acc:HGNC:9669]
22. PTPRF ENSGALG00000010053 27 0.951 - - 0.951 - - - - - - - protein tyrosine phosphatase, receptor type F [Source:HGNC Symbol;Acc:HGNC:9670]
23. SCG2 ENSGALG00000029819 26 0.946 - - 0.946 - - - - - - - secretogranin II [Source:HGNC Symbol;Acc:HGNC:10575]
24. ENSGALG00000026496 ENSGALG00000026496 9 0.945 - - 0.945 - - - - - - -
25. SLC38A9 ENSGALG00000014712 16 0.943 - - 0.943 - - - - - - - solute carrier family 38 member 9 [Source:HGNC Symbol;Acc:HGNC:26907]
26. FASTK ENSGALG00000033058 21 0.937 - - 0.937 - - - - - - - Fas activated serine/threonine kinase
27. S100A13 ENSGALG00000046614 201 0.934 - - 0.934 - - - - - - - S100 calcium binding protein A13 [Source:HGNC Symbol;Acc:HGNC:10490]
28. SLC4A10 ENSGALG00000030032 56 0.931 - - 0.931 - - - - - - - solute carrier family 4 member 10 [Source:HGNC Symbol;Acc:HGNC:13811]
29. TRIM29 ENSGALG00000042360 34 0.93 - - 0.930 - - - - - - - tripartite motif containing 29 [Source:HGNC Symbol;Acc:HGNC:17274]
30. ADAMTS12 55 0.926 - - 0.926 - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif 12, transcript variant X2
31. XK ENSGALG00000016262 60 0.925 - - 0.925 - - - - - - - X-linked Kx blood group [Source:NCBI gene;Acc:427991]
32. GRB10 ENSGALG00000013100 37 0.923 - - 0.923 - - - - - - - growth factor receptor bound protein 10 [Source:NCBI gene;Acc:420948]
33. SK2 SK2 74 0.922 - - 0.922 - - - - - - -
34. RNASEL ENSGALG00000042986 460 0.918 - - 0.918 - - - - - - - ribonuclease L [Source:NCBI gene;Acc:424410]
35. ENSGALG00000004951 ENSGALG00000004951 18 0.918 - - 0.918 - - - - - - -
36. PARK2 166 0.916 - - 0.916 - - - - - - - parkin RBR E3 ubiquitin protein ligase
37. CHST9 ENSGALG00000019489 21 0.915 - - - - - 0.915 - - - - carbohydrate sulfotransferase 9 [Source:HGNC Symbol;Acc:HGNC:19898]
38. ENSGALG00000024048 ENSGALG00000024048 50 0.913 - - 0.913 - - - - - - -
39. GPR124 GPR124 10 0.911 - - - - - 0.911 - - - -
40. MAN1B1 ENSGALG00000037375 308 0.909 - - 0.909 - - - - - - - mannosidase alpha class 1B member 1 [Source:HGNC Symbol;Acc:HGNC:6823]
41. LLGL1 ENSGALG00000014408 15 0.906 - - - - - - - - - 0.906 LLGL1, scribble cell polarity complex component [Source:HGNC Symbol;Acc:HGNC:6628]
42. IQSEC1 ENSGALG00000005042 24 0.906 - - - - - - - - - 0.906 IQ motif and Sec7 domain 1 [Source:HGNC Symbol;Acc:HGNC:29112]
43. KCNG1 ENSGALG00000007980 26 0.906 - - - - - - - - - 0.906 potassium voltage-gated channel modifier subfamily G member 1 [Source:HGNC Symbol;Acc:HGNC:6248]
44. ALOX5 ENSGALG00000005857 73 0.896 - - 0.896 - - - - - - - arachidonate 5-lipoxygenase [Source:HGNC Symbol;Acc:HGNC:435]
45. SV2B ENSGALG00000030250 164 0.895 - - 0.895 - - - - - - - synaptic vesicle glycoprotein 2B [Source:HGNC Symbol;Acc:HGNC:16874]
46. ZC3H12B ENSGALG00000039391 39 0.893 - - 0.893 - - - - - - - zinc finger CCCH-type containing 12B [Source:HGNC Symbol;Acc:HGNC:17407]
47. C16orf72 ENSGALG00000007291 228 0.892 - - 0.892 - - - - - - - chromosome 16 open reading frame 72 [Source:HGNC Symbol;Acc:HGNC:30103]
48. MAP3K21 ENSGALG00000011008 54 0.89 - - 0.890 - - - - - - - mitogen-activated protein kinase kinase kinase 21 [Source:HGNC Symbol;Acc:HGNC:29798]
49. VWA5A ENSGALG00000028815 19 0.89 - - - - - - - - - 0.890 von Willebrand factor A domain containing 5A, transcript variant X5
50. FASTKD5 ENSGALG00000045410 386 0.888 - - 0.888 - - - - - - - FAST kinase domains 5 [Source:HGNC Symbol;Acc:HGNC:25790]
51. TWF1 ENSGALG00000009595 6 0.881 - - - - - - - - - 0.881 twinfilin actin binding protein 1 [Source:NCBI gene;Acc:417797]
52. SEH1L ENSGALG00000013872 315 0.878 - - 0.878 - - - - - - - SEH1 like nucleoporin [Source:HGNC Symbol;Acc:HGNC:30379]
53. PAX2 ENSGALG00000005689 351 0.876 - - 0.876 - - - - - - - paired box 2 [Source:NCBI gene;Acc:395574]
54. SLC17A8 ENSGALG00000041122 57 0.875 - - 0.875 - - - - - - - Gallus gallus solute carrier family 17 member 8 (SLC17A8), mRNA. [Source:RefSeq mRNA;Acc:NM_001319029]
55. MSX2 ENSGALG00000038848 6950 0.875 - 0.875 - - - - - - - - msh homeobox 2 [Source:NCBI gene;Acc:395245]
56. CPPED1 ENSGALG00000040854 202 0.873 - - 0.873 - - - - - - - calcineurin like phosphoesterase domain containing 1 [Source:NCBI gene;Acc:416418]
57. GUF1 ENSGALG00000014217 211 0.871 - - 0.871 - - - - - - - GUF1 homolog, GTPase [Source:HGNC Symbol;Acc:HGNC:25799]
58. TMEM206 ENSGALG00000009822 80 0.868 - - 0.868 - - - - - - - transmembrane protein 206 [Source:HGNC Symbol;Acc:HGNC:25593]
59. GDAP2 ENSGALG00000014794 523 0.868 - - 0.868 - - - - - - - ganglioside induced differentiation associated protein 2 [Source:HGNC Symbol;Acc:HGNC:18010]
60. PDE6G ENSGALG00000004514 231 0.868 - - 0.868 - - - - - - - phosphodiesterase 6G [Source:NCBI gene;Acc:395091]
61. RNF216 ENSGALG00000004629 84 0.867 - - 0.867 - - - - - - - ring finger protein 216 [Source:HGNC Symbol;Acc:HGNC:21698]
62. LOC421415 ENSGALG00000010024 12 0.866 - - - - - - - - - 0.866 uncharacterized LOC421415, transcript variant X6
63. SLC47A2 ENSGALG00000004778 2 0.865 - - - - - 0.865 - - - - solute carrier family 47 member 2 [Source:NCBI gene;Acc:417616]
64. SCN4B ENSGALG00000007409 22 0.865 - - - - - 0.865 - - - - sodium voltage-gated channel beta subunit 4 [Source:HGNC Symbol;Acc:HGNC:10592]
65. CAD19 CAD19 17 0.865 - - - - - 0.865 - - - -
66. PPIL6 ENSGALG00000015237 11 0.865 - - - - - 0.865 - - - - peptidylprolyl isomerase like 6 [Source:HGNC Symbol;Acc:HGNC:21557]
67. C8orf22 C8orf22 37 0.865 - - - - - 0.865 - - - -
68. SYNRG ENSGALG00000005468 27 0.865 - - - - - 0.865 - - - - synergin gamma [Source:HGNC Symbol;Acc:HGNC:557]
69. SLC5A12 ENSGALG00000013304 1 0.865 - - - - - 0.865 - - - - solute carrier family 5 member 12 [Source:HGNC Symbol;Acc:HGNC:28750]
70. MST MST 9 0.865 - - - - - 0.865 - - - -
71. CMBL ENSGALG00000013033 3 0.865 - - - - - 0.865 - - - - carboxymethylenebutenolidase homolog, transcript variant X4
72. CECR5 3 0.865 - - - - - 0.865 - - - - cat eye syndrome chromosome region, candidate 5, transcript variant X2
73. GPR160 ENSGALG00000039989 1 0.865 - - - - - 0.865 - - - - G protein-coupled receptor 160 [Source:NCBI gene;Acc:424992]
74. AK7 ENSGALG00000011093 9 0.865 - - - - - 0.865 - - - - adenylate kinase 7 [Source:HGNC Symbol;Acc:HGNC:20091]
75. GPR156 ENSGALG00000014973 4 0.865 - - - - - 0.865 - - - - G protein-coupled receptor 156, transcript variant X4
76. MEX3D ENSGALG00000001106 2 0.865 - - - - - 0.865 - - - - mex-3 RNA binding family member D, transcript variant X3
77. HEPACAM2 ENSGALG00000009482 3 0.865 - - - - - 0.865 - - - - HEPACAM family member 2 [Source:HGNC Symbol;Acc:HGNC:27364]
78. SCARNA7 SCARNA7 2 0.865 - - - - - 0.865 - - - -
79. IP3KA IP3KA 4 0.865 - - - - - 0.865 - - - -
80. ENSGALG00000022810 ENSGALG00000022810 1 0.865 - - - - - 0.865 - - - -
81. NTRK2 ENSGALG00000012594 24 0.865 - - - - - 0.865 - - - - neurotrophic receptor tyrosine kinase 2 [Source:NCBI gene;Acc:396157]
82. HELB ENSGALG00000009885 8 0.865 - - - - - 0.865 - - - - DNA helicase B [Source:HGNC Symbol;Acc:HGNC:17196]
83. PTPRT ENSGALG00000037889 5 0.865 - - - - - 0.865 - - - - protein tyrosine phosphatase, receptor type T [Source:HGNC Symbol;Acc:HGNC:9682]
84. KCNK9 ENSGALG00000037285 1 0.865 - - - - - 0.865 - - - - potassium two pore domain channel subfamily K member 9 [Source:HGNC Symbol;Acc:HGNC:6283]
85. BNC1 ENSGALG00000006041 63 0.865 - - - - - 0.865 - - - - basonuclin 1 [Source:HGNC Symbol;Acc:HGNC:1081]
86. KLHL28 ENSGALG00000012489 2 0.865 - - - - - 0.865 - - - - kelch like family member 28 [Source:HGNC Symbol;Acc:HGNC:19741]
87. ENSGALG00000027371 ENSGALG00000027371 1 0.865 - - - - - 0.865 - - - -
88. LOC417973 ENSGALG00000019325 9 0.865 - - - - - 0.865 - - - - uncharacterized LOC417973, transcript variant X1
89. STAR ENSGALG00000003242 4 0.865 - - - - - 0.865 - - - - steroidogenic acute regulatory protein [Source:NCBI gene;Acc:395421]
90. TG ENSGALG00000039509 19 0.865 - - - - - 0.865 - - - - thyroglobulin [Source:HGNC Symbol;Acc:HGNC:11764]
91. SNORA68 SNORA68 4 0.863 - - - - - - - - - 0.863
92. DLX5 ENSGALG00000009129 1395 0.862 - 0.862 - - - - - - - - distal-less homeobox 5 [Source:NCBI gene;Acc:373969]
93. WARS2 ENSGALG00000014772 29 0.86 - - - - 0.860 - - - - - tryptophanyl tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:12730]
94. AFF1 ENSGALG00000043935 34 0.859 - - - - 0.859 - - - - - AF4/FMR2 family member 1 [Source:HGNC Symbol;Acc:HGNC:7135]
95. ENSGALG00000010336 ENSGALG00000010336 16 0.859 - - - - 0.859 - - - - -
96. RNF150 ENSGALG00000009865 80 0.859 - - 0.859 - - - - - - - ring finger protein 150 [Source:HGNC Symbol;Acc:HGNC:23138]
97. C9ORF9 C9ORF9 13 0.859 - - - - 0.859 - - - - -
98. EZH1 ENSGALG00000003068 30 0.859 - - - - 0.859 - - - - - enhancer of zeste 1 polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:3526]
99. CYTH4 ENSGALG00000012454 12 0.859 - - - - 0.859 - - - - - cytohesin 4 [Source:NCBI gene;Acc:418043]
100. TRAF3IP3 ENSGALG00000001373 11 0.859 - - - - 0.859 - - - - - TRAF3 interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:30766]

There are 240 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA