Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CCT4

Gene Name Gene ID Reads Annotation
CCT4 ENSGALG00000008812 78267 chaperonin containing TCP1 subunit 4 [Source:NCBI gene;Acc:395414]











Genes with expression patterns similar to CCT4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CCT4 ENSGALG00000008812 78267 9 1.000 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 chaperonin containing TCP1 subunit 4 [Source:NCBI gene;Acc:395414]
2. HSPA8 ENSGALG00000006512 124825 2.362 - 0.743 - - 0.856 0.763 - - - - heat shock 70kDa protein 8 [Source:NCBI gene;Acc:395853]
3. TCP1 ENSGALG00000011637 73216 1.642 - - - - 0.858 - - - 0.784 - t-complex 1 [Source:NCBI gene;Acc:421586]
4. ENSGALG00000023447 ENSGALG00000023447 17486 1.606 - - - - 0.881 - 0.725 - - -
5. LDHB ENSGALG00000035836 169726 1.605 - - - - - 0.791 - - 0.814 - lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
6. MIF ENSGALG00000006326 109683 1.573 - - - - 0.804 0.769 - - - - macrophage migration inhibitory factor (glycosylation-inhibiting factor) [Source:NCBI gene;Acc:100857237]
7. TUBB2C TUBB2C 44249 1.539 - - - - - - - 0.814 0.725 -
8. HEY1 ENSGALG00000035031 8795 1.463 - - - - - - 0.729 - 0.734 - hes related family bHLH transcription factor with YRPW motif 1 [Source:HGNC Symbol;Acc:HGNC:4880]
9. PSMA3 ENSGALG00000012039 26539 1.462 - - - - - 0.750 - - 0.712 - proteasome subunit alpha 3 [Source:NCBI gene;Acc:423542]
10. PITPNB ENSGALG00000005654 21578 1.46 - - - - - 0.754 - 0.706 - - phosphatidylinositol transfer protein beta [Source:NCBI gene;Acc:416912]
11. PEBP1 ENSGALG00000007403 77502 1.45 - - - - - 0.708 - - 0.742 - phosphatidylethanolamine binding protein 1 [Source:NCBI gene;Acc:416990]
12. CSNK1G1 ENSGALG00000030812 31618 0.966 - - - - 0.966 - - - - - casein kinase 1 gamma 1 [Source:NCBI gene;Acc:415328]
13. FBXO9 ENSGALG00000016320 9600 0.965 - - - - 0.965 - - - - - F-box protein 9 [Source:NCBI gene;Acc:421895]
14. STRAP ENSGALG00000013092 13100 0.964 - - - - 0.964 - - - - - serine/threonine kinase receptor associated protein [Source:NCBI gene;Acc:418175]
15. MKI67 ENSGALG00000025996 28136 0.964 - - - - 0.964 - - - - - marker of proliferation Ki-67, transcript variant X3
16. MRPL23 ENSGALG00000006561 13737 0.964 - - - - 0.964 - - - - - mitochondrial ribosomal protein L23 [Source:NCBI gene;Acc:374255]
17. ATG5 ENSGALG00000015387 7752 0.963 - - - - 0.963 - - - - - autophagy related 5 [Source:NCBI gene;Acc:421784]
18. MRPS27 ENSGALG00000015002 6541 0.963 - - - - 0.963 - - - - - mitochondrial ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:14512]
19. OLA1 ENSGALG00000009325 26414 0.963 - - - - 0.963 - - - - - Obg like ATPase 1 [Source:NCBI gene;Acc:424144]
20. CZH9ORF41 CZH9ORF41 3492 0.961 - - - - 0.961 - - - - -
21. TRAPPC12 ENSGALG00000016387 2593 0.961 - - - - 0.961 - - - - - trafficking protein particle complex 12 [Source:HGNC Symbol;Acc:HGNC:24284]
22. PCBP4 ENSGALG00000027695 7937 0.961 - - - - 0.961 - - - - - poly(rC) binding protein 4 [Source:HGNC Symbol;Acc:HGNC:8652]
23. FH ENSGALG00000013165 13669 0.96 - - - - 0.960 - - - - - fumarate hydratase [Source:NCBI gene;Acc:420969]
24. TK2 ENSGALG00000034216 5394 0.959 - - - - 0.959 - - - - - thymidine kinase 2, mitochondrial [Source:NCBI gene;Acc:427551]
25. AATF ENSGALG00000005420 6501 0.959 - - - - 0.959 - - - - - apoptosis antagonizing transcription factor [Source:NCBI gene;Acc:417653]
26. SAR1B ENSGALG00000038753 6493 0.959 - - - - 0.959 - - - - - secretion associated Ras related GTPase 1B [Source:NCBI gene;Acc:416314]
27. MRPS25 ENSGALG00000008506 12131 0.959 - - - - 0.959 - - - - - mitochondrial ribosomal protein S25 [Source:NCBI gene;Acc:416129]
28. CBWD1 ENSGALG00000010147 2765 0.959 - - - - 0.959 - - - - - COBW domain containing 1 [Source:NCBI gene;Acc:427347]
29. RABEP1 ENSGALG00000001737 2650 0.958 - - - - 0.958 - - - - - rabaptin, RAB GTPase binding effector protein 1 [Source:NCBI gene;Acc:395930]
30. TBCA ENSGALG00000004353 18510 0.958 - - - - 0.958 - - - - - tubulin folding cofactor A [Source:NCBI gene;Acc:416367]
31. SSR2 ENSGALG00000000764 32190 0.957 - - - - 0.957 - - - - - signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
32. COIL ENSGALG00000003158 7806 0.957 - - - - 0.957 - - - - - coilin [Source:HGNC Symbol;Acc:HGNC:2184]
33. WDR82 ENSGALG00000025904 4783 0.957 - - - - 0.957 - - - - - WD repeat domain 82 [Source:NCBI gene;Acc:415942]
34. KPNA3 ENSGALG00000017009 17330 0.957 - - - - 0.957 - - - - - karyopherin subunit alpha 3 [Source:NCBI gene;Acc:418870]
35. TLK2 ENSGALG00000000410 4690 0.957 - - - - 0.957 - - - - - tousled like kinase 2 [Source:HGNC Symbol;Acc:HGNC:11842]
36. IGBP1 ENSGALG00000044628 9200 0.956 - - - - 0.956 - - - - - immunoglobulin (CD79A) binding protein 1, transcript variant X3
37. BAG4 ENSGALG00000003254 5751 0.956 - - - - 0.956 - - - - - BCL2 associated athanogene 4 [Source:HGNC Symbol;Acc:HGNC:940]
38. NAP1L1 ENSGALG00000010238 14506 0.955 - - - - 0.955 - - - - - nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]
39. TCP11L1 ENSGALG00000011688 2427 0.955 - - - - 0.955 - - - - - t-complex 11 like 1 [Source:NCBI gene;Acc:421594]
40. PLAA ENSGALG00000001782 5459 0.955 - - - - 0.955 - - - - - phospholipase A2 activating protein [Source:HGNC Symbol;Acc:HGNC:9043]
41. EAPP ENSGALG00000010007 5080 0.955 - - - - 0.955 - - - - - E2F associated phosphoprotein [Source:NCBI gene;Acc:423319]
42. SHROOM2 ENSGALG00000030802 4517 0.955 - - - - 0.955 - - - - - shroom family member 2 [Source:HGNC Symbol;Acc:HGNC:630]
43. SKP2 ENSGALG00000003547 14637 0.955 - - - - 0.955 - - - - - S-phase kinase associated protein 2 [Source:NCBI gene;Acc:427437]
44. NOP58 ENSGALG00000008454 34630 0.955 - - - - 0.955 - - - - - NOP58 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:29926]
45. PSPC1 ENSGALG00000017142 13036 0.955 - - - - 0.955 - - - - - paraspeckle component 1 [Source:NCBI gene;Acc:418955]
46. TLCD1 ENSGALG00000003973 17569 0.954 - - - - 0.954 - - - - - TLC domain containing 1 [Source:NCBI gene;Acc:417575]
47. SIRT1 ENSGALG00000002761 9028 0.954 - - - - 0.954 - - - - - sirtuin 1 [Source:NCBI gene;Acc:423646]
48. PNRC2 ENSGALG00000004122 19228 0.954 - - - - 0.954 - - - - - proline rich nuclear receptor coactivator 2 [Source:NCBI gene;Acc:419688]
49. ELL2 ENSGALG00000014678 1111 0.954 - - - - 0.954 - - - - - elongation factor for RNA polymerase II 2 [Source:HGNC Symbol;Acc:HGNC:17064]
50. XPO7 ENSGALG00000001838 1875 0.954 - - - - 0.954 - - - - - exportin 7 [Source:NCBI gene;Acc:426925]
51. IGF1R ENSGALG00000040651 772 0.953 - - - - 0.953 - - - - - insulin like growth factor 1 receptor [Source:NCBI gene;Acc:395889]
52. SSPN ENSGALG00000014042 638 0.953 - - - - 0.953 - - - - - sarcospan [Source:HGNC Symbol;Acc:HGNC:11322]
53. DDX55 ENSGALG00000003298 2315 0.953 - - - - 0.953 - - - - - DEAD-box helicase 55 [Source:NCBI gene;Acc:416820]
54. CTSZ ENSGALG00000007462 630 0.953 - - - - 0.953 - - - - - cathepsin Z [Source:HGNC Symbol;Acc:HGNC:2547]
55. DNAJC12 ENSGALG00000002769 1418 0.953 - - - - 0.953 - - - - - DnaJ heat shock protein family (Hsp40) member C12 [Source:NCBI gene;Acc:423647]
56. KNOP1 ENSGALG00000002042 6251 0.953 - - - - 0.953 - - - - - lysine-rich nucleolar protein 1, transcript variant X1
57. IGDCC4 ENSGALG00000007410 5457 0.953 - - - - 0.953 - - - - - immunoglobulin superfamily DCC subclass member 4 [Source:HGNC Symbol;Acc:HGNC:13770]
58. REST 2394 0.952 - - - - 0.952 - - - - - RE1 silencing transcription factor
59. NFASC ENSGALG00000031776 4264 0.952 - - - - 0.952 - - - - - neurofascin [Source:NCBI gene;Acc:419824]
60. POLR2B ENSGALG00000011387 4864 0.952 - - - - 0.952 - - - - - RNA polymerase II subunit B [Source:NCBI gene;Acc:422621]
61. ENSGALG00000011687 ENSGALG00000011687 4553 0.952 - - - - 0.952 - - - - -
62. CDC42SE2 ENSGALG00000027258 4725 0.952 - - - - 0.952 - - - - - CDC42 small effector 2 [Source:NCBI gene;Acc:768825]
63. YY1 ENSGALG00000017388 1933 0.951 - - - - 0.951 - - - - - YY1 transcription factor [Source:NCBI gene;Acc:423455]
64. ZBTB10 ENSGALG00000034376 3271 0.951 - - - - 0.951 - - - - - zinc finger and BTB domain containing 10 [Source:HGNC Symbol;Acc:HGNC:30953]
65. COMMD8 ENSGALG00000026279 13509 0.951 - - - - 0.951 - - - - - COMM domain containing 8 [Source:NCBI gene;Acc:422769]
66. STK3 ENSGALG00000032850 6339 0.951 - - - - 0.951 - - - - - serine/threonine kinase 3 [Source:NCBI gene;Acc:425375]
67. PUM1 ENSGALG00000042598 9392 0.95 - - - - 0.950 - - - - - pumilio RNA binding family member 1 [Source:NCBI gene;Acc:419554]
68. ENSGALG00000014852 ENSGALG00000014852 15288 0.95 - - - - 0.950 - - - - -
69. RANGAP1 ENSGALG00000011966 20170 0.95 - - - - 0.950 - - - - - Ran GTPase activating protein 1 [Source:NCBI gene;Acc:417997]
70. RPL24 ENSGALG00000015339 227460 0.949 - - - - 0.949 - - - - - ribosomal protein L24 [Source:NCBI gene;Acc:418401]
71. FERMT2 ENSGALG00000012425 5480 0.949 - - - - 0.949 - - - - - fermitin family member 2 [Source:HGNC Symbol;Acc:HGNC:15767]
72. PSMC2 ENSGALG00000008236 25980 0.948 - - - - 0.948 - - - - - proteasome 26S subunit, ATPase 2 [Source:NCBI gene;Acc:417716]
73. TMEM165 ENSGALG00000027886 5468 0.948 - - - - 0.948 - - - - - transmembrane protein 165 [Source:HGNC Symbol;Acc:HGNC:30760]
74. LATS2 4776 0.948 - - - - 0.948 - - - - - large tumor suppressor kinase 2
75. SFSWAP ENSGALG00000002487 9977 0.948 - - - - 0.948 - - - - - splicing factor SWAP [Source:HGNC Symbol;Acc:HGNC:10790]
76. EXO1 ENSGALG00000010748 7572 0.946 - - - - 0.946 - - - - - exonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3511]
77. LARP1 ENSGALG00000040109 14808 0.945 - - - - 0.945 - - - - - La ribonucleoprotein domain family member 1 [Source:HGNC Symbol;Acc:HGNC:29531]
78. OGT ENSGALG00000005425 31074 0.945 - - - - 0.945 - - - - - O-linked N-acetylglucosamine (GlcNAc) transferase [Source:HGNC Symbol;Acc:HGNC:8127]
79. POLR3F ENSGALG00000008749 5645 0.944 - - - - 0.944 - - - - - RNA polymerase III subunit F [Source:NCBI gene;Acc:416723]
80. SH2D3C ENSGALG00000005036 5101 0.942 - - - - 0.942 - - - - - SH2 domain containing 3C [Source:HGNC Symbol;Acc:HGNC:16884]
81. GFPT1 ENSGALG00000036391 14025 0.941 - - - - 0.941 - - - - - glutamine--fructose-6-phosphate transaminase 1 [Source:NCBI gene;Acc:419514]
82. UGDH ENSGALG00000041993 23474 0.941 - - - - - - 0.941 - - - UDP-glucose 6-dehydrogenase [Source:NCBI gene;Acc:422792]
83. C20H20ORF24 ENSGALG00000001054 22026 0.94 - - - - 0.940 - - - - - chromosome 20 open reading frame, human C20orf24 [Source:NCBI gene;Acc:768550]
84. REEP5 ENSGALG00000023157 6282 0.94 - - - - 0.940 - - - - - receptor accessory protein 5 [Source:NCBI gene;Acc:770021]
85. PTTG1 17936 0.939 - - - - 0.939 - - - - - pituitary tumor-transforming 1, transcript variant X1
86. PTPN12 9302 0.939 - - - - 0.939 - - - - - protein tyrosine phosphatase, non-receptor type 12
87. NAA25 ENSGALG00000041821 12729 0.936 - - - - 0.936 - - - - - N(alpha)-acetyltransferase 25, NatB auxiliary subunit [Source:NCBI gene;Acc:416883]
88. GBAS 18453 0.936 - - - - 0.936 - - - - - glioblastoma amplified sequence
89. ADD3 ENSGALG00000008542 13814 0.935 - - - - 0.935 - - - - - adducin 3 (gamma) [Source:NCBI gene;Acc:373892]
90. GPN3 ENSGALG00000003807 6320 0.932 - - - - 0.932 - - - - - GPN-loop GTPase 3 [Source:HGNC Symbol;Acc:HGNC:30186]
91. ATP2A2 ENSGALG00000032287 12734 0.931 - - - - 0.931 - - - - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 [Source:NCBI gene;Acc:396446]
92. RAB12 ENSGALG00000033608 14160 0.927 - - - - 0.927 - - - - - RAB12, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:31332]
93. DRAXIN ENSGALG00000004631 3122 0.927 - - - - 0.927 - - - - - dorsal inhibitory axon guidance protein [Source:NCBI gene;Acc:419492]
94. RCAN3 ENSGALG00000004282 7778 0.926 - - - - 0.926 - - - - - RCAN family member 3 [Source:NCBI gene;Acc:419698]
95. METTL23 ENSGALG00000001790 7906 0.926 - - - - 0.926 - - - - - methyltransferase like 23 [Source:HGNC Symbol;Acc:HGNC:26988]
96. DHFR ENSGALG00000026757 18478 0.923 - - - - 0.923 - - - - - dihydrofolate reductase [Source:NCBI gene;Acc:427317]
97. NDUFA8 ENSGALG00000040987 49453 0.916 - - - - 0.916 - - - - - NADH:ubiquinone oxidoreductase subunit A8 [Source:NCBI gene;Acc:417112]
98. LY6E ENSGALG00000041621 16227 0.914 - - - - 0.914 - - - - - lymphocyte antigen 6 family member E [Source:NCBI gene;Acc:395550]
99. SRSF3 ENSGALG00000000533 51281 0.909 - - - - 0.909 - - - - - serine and arginine rich splicing factor 3 [Source:NCBI gene;Acc:419815]
100. PAPOLA ENSGALG00000033099 20532 0.908 - - - - 0.908 - - - - - poly(A) polymerase alpha [Source:NCBI gene;Acc:395878]

There are 122 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA