Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for CCSER1

Gene Name Gene ID Reads Annotation
CCSER1 ENSDARG00000075919 16 coiled-coil serine-rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-081104-422]










Genes with expression patterns similar to CCSER1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. CCSER1 ENSDARG00000075919 16 7 1.000 - 1.000 1.000 1.000 1.000 - 1.000 1.000 coiled-coil serine-rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-081104-422]
2. si:dkeyp-82a1.8 ENSDARG00000095539 6 2 - - - 1.000 - 1.000 - - - si:dkeyp-82a1.8 [Source:ZFIN;Acc:ZDB-GENE-081104-479]
3. mctp1b ENSDARG00000060871 20 1.991 - - - - - 1.000 - 0.991 - multiple C2 domains, transmembrane 1b [Source:ZFIN;Acc:ZDB-GENE-090313-382]
4. gpr88 24 1.978 - - - 0.978 - 1.000 - - - G protein-coupled receptor 88
5. mdm1 ENSDARG00000045675 64 1.916 - - - - - 1.000 - 0.916 - Mdm1 nuclear protein homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-041210-117]
6. lmbrd2a ENSDARG00000099566 15 1.869 - - 0.869 1.000 - - - - - LMBR1 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050417-32]
7. kctd4 ENSDARG00000068691, ENSDARG00000116087 85 1.825 - - - - - 1.000 - 0.825 - potassium channel tetramerization domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040704-71]
8. snoU13 snoU13 2 1.82 0.820 - - 1.000 - - - - -
9. chd3 ENSDARG00000021405, ENSDARG00000115235 17 1.82 0.820 - 1.000 - - - - - - chromodomain helicase DNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-121031-4]
10. si:ch211-108c6.2 14 1.813 - - - - - 1.000 - - 0.813 si:ch211-108c6.2
11. CABZ01069081.1 CABZ01069081.1 16 1.806 - - 0.806 - - 1.000 - - -
12. si:ch211-71k24.5 si:ch211-71k24.5 9 1.792 - - - 0.792 - 1.000 - - -
13. PIK3CA ENSDARG00000075456 39 1.754 0.820 - - 0.934 - - - - - phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha [Source:ZFIN;Acc:ZDB-GENE-130409-1]
14. si:ch211-240l19.6 ENSDARG00000074613, ENSDARG00000115536 7 1.748 0.820 - 0.928 - - - - - - si:ch211-240l19.6 [Source:ZFIN;Acc:ZDB-GENE-041210-328]
15. klhl42 ENSDARG00000006011 46 1.741 - - 0.831 - - - - 0.910 - kelch-like family, member 42 [Source:ZFIN;Acc:ZDB-GENE-041210-190]
16. FP236276.2 FP236276.2 43 1.737 - - - - 0.781 - - 0.956 -
17. efcab2 ENSDARG00000074323 88 1.734 - - - - - 0.771 - 0.963 - EF-hand calcium binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-070521-5]
18. nphp1 ENSDARG00000009046, ENSDARG00000113790 104 1.724 0.724 - - - - 1.000 - - - nephronophthisis 1 [Source:ZFIN;Acc:ZDB-GENE-060929-1234]
19. THSD7B THSD7B 15 1.639 - - - - 0.775 0.864 - - -
20. otpb ENSDARG00000058379 1143 1.57 - - - 0.721 - 0.849 - - - orthopedia homeobox b [Source:ZFIN;Acc:ZDB-GENE-990708-7]
21. C12H17orf62_1 C12H17orf62_1 83 1.528 - - - - 0.743 - - 0.785 -
22. CR936977.1 ENSDARG00000100144 4 1 - - 1.000 - - - - - -
23. si:busm1-180g5.7 si:busm1-180g5.7 15 1 - - - 1.000 - - - - -
24. si:ch211-278f21.4 si:ch211-278f21.4 0 1 - - - 1.000 - - - - -
25. piwil2 ENSDARG00000062601 14 1 - - 1.000 - - - - - - piwi-like RNA-mediated gene silencing 2 [Source:ZFIN;Acc:ZDB-GENE-060526-345]
26. zgc:153311 ENSDARG00000015964 85 1 - - - 1.000 - - - - - zgc:153311 [Source:ZFIN;Acc:ZDB-GENE-060825-194]
27. RIMS2 RIMS2 2 1 - - - 1.000 - - - - -
28. klhl24 klhl24 40 1 - - - - - 1.000 - - -
29. si:ch211-171l17.14 ENSDARG00000100412, ENSDARG00000101388 4 1 - - - - - 1.000 - - - si:ch211-171l17.14 [Source:ZFIN;Acc:ZDB-GENE-070912-153]
30. LRRC71 LRRC71 11 1 - - - - - 1.000 - - -
31. FP085391.3 FP085391.3 14 1 - - - - - 1.000 - - -
32. si:ch211-105d18.7 si:ch211-105d18.7 6 1 - - - - - 1.000 - - -
33. olfcd3 ENSDARG00000068576 0 1 - - - - - 1.000 - - - olfactory receptor C family, d3 [Source:ZFIN;Acc:ZDB-GENE-050712-4]
34. si:ch211-89f22.1 si:ch211-89f22.1 11 1 - - - - - 1.000 - - -
35. CU633848.1 CU633848.1 4 1 - - - - - 1.000 - - -
36. si:ch211-222m18.4 ENSDARG00000094425 7 1 - - 1.000 - - - - - - si:ch211-222m18.4 [Source:ZFIN;Acc:ZDB-GENE-050419-64]
37. or112-1 ENSDARG00000077211 2 1 - - - - - 1.000 - - - odorant receptor, family A, subfamily 112, member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-195]
38. si:dkey-179o14.4 si:dkey-179o14.4 2 1 - - 1.000 - - - - - -
39. si:ch211-12e1.5 si:ch211-12e1.5 14 1 - - - - - 1.000 - - -
40. irgq2 ENSDARG00000068657 4 1 - - - 1.000 - - - - - immunity-related GTPase family, q2 [Source:ZFIN;Acc:ZDB-GENE-051212-7]
41. si:ch211-243a22.1 si:ch211-243a22.1 42 1 - - - - - 1.000 - - -
42. nbn ENSDARG00000040303 43 1 - - - - - 1.000 - - - nibrin [Source:ZFIN;Acc:ZDB-GENE-041008-35]
43. rx3 ENSDARG00000052893 43 1 - - - - - 1.000 - - - retinal homeobox gene 3 [Source:ZFIN;Acc:ZDB-GENE-990415-238]
44. zgc:114081 ENSDARG00000057899, ENSDARG00000113048 5 1 - - - - - 1.000 - - - zgc:114081 [Source:ZFIN;Acc:ZDB-GENE-050913-78]
45. BX640518.1 BX640518.1 24 1 - - - - - 1.000 - - -
46. grin2cb ENSDARG00000077560 9 1 - - - - - 1.000 - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2Cb [Source:ZFIN;Acc:ZDB-GENE-100308-2]
47. ABCC6 ABCC6 5 1 - - - 1.000 - - - - -
48. si:ch1073-181h11.2 ENSDARG00000103883 24 1 - - 1.000 - - - - - - si:ch1073-181h11.2 [Source:ZFIN;Acc:ZDB-GENE-081031-58]
49. MYO9B ENSDARG00000078313 97 1 - - - - - 1.000 - - - myosin IXB [Source:HGNC Symbol;Acc:HGNC:7609]
50. si:dkey-63d15.12 ENSDARG00000075480 9 1 - - - - - 1.000 - - - si:dkey-63d15.12 [Source:ZFIN;Acc:ZDB-GENE-080303-18]
51. HTRA3 ENSDARG00000010925 0 1 - - - 1.000 - - - - - HtrA serine peptidase 3 [Source:HGNC Symbol;Acc:HGNC:30406]
52. CMA1_10 CMA1_10 0 1 - - - - - 1.000 - - -
53. CR788320.1 CR788320.1 1 1 - - - - - 1.000 - - -
54. CT573234.2 CT573234.2 1 1 - - - - - 1.000 - - -
55. NUGGC NUGGC 9 1 - - - - - 1.000 - - -
56. LRRK1_1 LRRK1_1 11 1 - - - - - 1.000 - - -
57. zp2.5 ENSDARG00000086522 15 1 - - - - - 1.000 - - - zona pellucida glycoprotein 2, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-090306-1]
58. ctrb1 ENSDARG00000090428, ENSDARG00000110297 1 1 - - - - - 1.000 - - - chymotrypsinogen B1 [Source:ZFIN;Acc:ZDB-GENE-030131-1171]
59. gyg2 ENSDARG00000033380 12 1 - - - - - 1.000 - - - glycogenin 2 [Source:ZFIN;Acc:ZDB-GENE-080723-74]
60. cacng7b ENSDARG00000070624 18 1 - - - - - 1.000 - - - calcium channel, voltage-dependent, gamma subunit 7b [Source:ZFIN;Acc:ZDB-GENE-100921-51]
61. U6_21 U6_21 0 1 - - - 1.000 - - - - -
62. si:dkey-167k11.3 si:dkey-167k11.3 3 1 - - - - - 1.000 - - -
63. ENSDARG00000063316 ENSDARG00000063316 4 1 - - - 1.000 - - - - -
64. si:dkey-267i17.2 si:dkey-267i17.2 0 1 - - - 1.000 - - - - -
65. si:ch73-67c22.3 si:ch73-67c22.3 30 1 - - - 1.000 - - - - -
66. phlpp2 ENSDARG00000090255 1 1 - - - - - 1.000 - - - PH domain and leucine rich repeat protein phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-070719-3]
67. si:ch73-36i7.2 si:ch73-36i7.2 5 1 - - - - - 1.000 - - -
68. caps2 ENSDARG00000058486 4 1 - - 1.000 - - - - - - calcyphosine 2 [Source:ZFIN;Acc:ZDB-GENE-091204-449]
69. CABZ01035647.1 CABZ01035647.1 5 1 - - - 1.000 - - - - -
70. arhgap23b ENSDARG00000026840 6 1 - - - - - 1.000 - - - Rho GTPase activating protein 23b [Source:ZFIN;Acc:ZDB-GENE-081031-78]
71. gng2 ENSDARG00000056831 81 1 - - - - - 1.000 - - - guanine nucleotide binding protein (G protein), gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050417-59]
72. CR855338.2 CR855338.2 0 1 - - - - - 1.000 - - -
73. il11b ENSDARG00000058557 17 1 - - - 1.000 - - - - - interleukin 11b [Source:ZFIN;Acc:ZDB-GENE-051019-2]
74. C6H16orf45 C6H16orf45 0 1 - - - 1.000 - - - - -
75. pgap2 ENSDARG00000044596 60 1 - - - - - 1.000 - - - post-GPI attachment to proteins 2 [Source:ZFIN;Acc:ZDB-GENE-050320-119]
76. TCERG1L ENSDARG00000109963 2 1 - - - 1.000 - - - - - transcription elongation regulator 1 like [Source:HGNC Symbol;Acc:HGNC:23533]
77. Metazoa_SRP_18 Metazoa_SRP_18 4 1 - - - 1.000 - - - - -
78. vti1a ENSDARG00000045065 7 1 - - - 1.000 - - - - - vesicle transport through interaction with t-SNAREs 1A [Source:ZFIN;Acc:ZDB-GENE-050809-135]
79. HSPA8 ENSDARG00000068992, ENSDARG00000114726 120 1 - - - - - 1.000 - - - heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
80. gzmk ENSDARG00000028780 1 1 - - - - - 1.000 - - - granzyme K [Source:ZFIN;Acc:ZDB-GENE-091204-352]
81. klhl5 ENSDARG00000062122, ENSDARG00000114563, ENSDARG00000115909 27 1 - - - - - 1.000 - - - kelch-like family member 5 [Source:ZFIN;Acc:ZDB-GENE-080424-7]
82. ENKD1 ENSDARG00000043550 44 1 - - - - - 1.000 - - - enkurin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25246]
83. CU469509.3 CU469509.3 1 1 - - - 1.000 - - - - -
84. RAB31 0 1 - - - 1.000 - - - - - RAB31, member RAS oncogene family, transcript variant X1
85. MUC5AC_2 MUC5AC_2 5 1 - - - - - 1.000 - - -
86. CABZ01083834.1 CABZ01083834.1 38 1 - - - - - 1.000 - - -
87. CU896645.1 CU896645.1 10 1 - - - - - 1.000 - - -
88. serpine3 ENSDARG00000057108 49 1 - - - - - 1.000 - - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3 [Source:ZFIN;Acc:ZDB-GENE-050309-223]
89. zgc:123060 4 1 - - 1.000 - - - - - - zgc:123060
90. PEG3_13 PEG3_13 5 1 - - - 1.000 - - - - -
91. BX322608.1 ENSDARG00000111690 326 1 - - - - - 1.000 - - -
92. si:dkeyp-101e12.1 ENSDARG00000089794 0 1 - - - 1.000 - - - - - si:dkeyp-101e12.1 [Source:ZFIN;Acc:ZDB-GENE-091113-32]
93. ZNF423 ENSDARG00000059707 11 1 - - - 1.000 - - - - - zinc finger protein 423 [Source:HGNC Symbol;Acc:HGNC:16762]
94. hid1b ENSDARG00000100583 35 1 - - - - - 1.000 - - - HID1 domain containing b [Source:ZFIN;Acc:ZDB-GENE-040718-239]
95. CABZ01031627.2 CABZ01031627.2 1 1 - - - - - 1.000 - - -
96. FAM78A FAM78A 61 1 - - - - - 1.000 - - -
97. FDFT1 ENSDARG00000101062 6 1 - - - - - 1.000 - - - farnesyl-diphosphate farnesyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-081104-242]
98. CABZ01012885.1 ENSDARG00000100377 0 1 - - - - - 1.000 - - - extracellular calcium-sensing receptor-like [Source:NCBI gene;Acc:100007225]
99. CR792453.3 ENSDARG00000110328 5 1 - - - - - 1.000 - - - uncharacterized LOC110438862 [Source:NCBI gene;Acc:110438862]
100. foxb1a ENSDARG00000089042 101 1 - - - - - 1.000 - - - forkhead box B1a [Source:ZFIN;Acc:ZDB-GENE-990616-47]

There are 915 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA