Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CCNL1

Gene Name Gene ID Reads Annotation
CCNL1 ENSGALG00000009699 1033 cyclin L1 [Source:HGNC Symbol;Acc:HGNC:20569]











Genes with expression patterns similar to CCNL1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CCNL1 ENSGALG00000009699 1033 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cyclin L1 [Source:HGNC Symbol;Acc:HGNC:20569]
2. CEP290 ENSGALG00000011177 1559 1.691 - - - - - - 0.940 0.751 - - centrosomal protein 290 [Source:HGNC Symbol;Acc:HGNC:29021]
3. ENSGALG00000013233 ENSGALG00000013233 3265 0.959 - - - - - - 0.959 - - -
4. FAM57A ENSGALG00000004820 1492 0.954 - - - - - - 0.954 - - - family with sequence similarity 57 member A [Source:HGNC Symbol;Acc:HGNC:29646]
5. FAM193A ENSGALG00000015667 3075 0.953 - - - - - - 0.953 - - - family with sequence similarity 193 member A [Source:HGNC Symbol;Acc:HGNC:16822]
6. SNORA31 SNORA31 183 0.951 - - - - - - 0.951 - - -
7. ENSGALG00000016099 ENSGALG00000016099 138 0.948 - - - - - - 0.948 - - -
8. ENTPD8L ENSGALG00000008936 731 0.947 - - - - - - 0.947 - - - ectonucleoside triphosphate diphosphohydrolase 8-like
9. PIK3R3 ENSGALG00000010335 374 0.946 - - - - - - 0.946 - - - phosphoinositide-3-kinase regulatory subunit 3, transcript variant X1
10. DNAJC16 ENSGALG00000032832 750 0.946 - - - - - - 0.946 - - - DnaJ heat shock protein family (Hsp40) member C16 [Source:NCBI gene;Acc:429208]
11. PGAP2 ENSGALG00000027762 2583 0.945 - - - - - - 0.945 - - - post-GPI attachment to proteins 2 [Source:HGNC Symbol;Acc:HGNC:17893]
12. MXRA5 ENSGALG00000016635 352 0.945 - - - - - - 0.945 - - - matrix remodeling associated 5 [Source:HGNC Symbol;Acc:HGNC:7539]
13. ZFYVE19 ENSGALG00000008460 2750 0.945 - - - - - - 0.945 - - - zinc finger FYVE-type containing 19 [Source:NCBI gene;Acc:423204]
14. PTN ENSGALG00000040493 864 0.944 - - - - - - 0.944 - - - pleiotrophin [Source:NCBI gene;Acc:418125]
15. MBNL2 ENSGALG00000016890 3162 0.943 - - - - - - 0.943 - - - muscleblind like splicing regulator 2 [Source:NCBI gene;Acc:418784]
16. NSRP1 ENSGALG00000004186 1683 0.942 - - - - - - 0.942 - - - nuclear speckle splicing regulatory protein 1 [Source:HGNC Symbol;Acc:HGNC:25305]
17. ENSGALG00000026925 ENSGALG00000026925 119 0.942 - - - - - - 0.942 - - -
18. ENSGALG00000028164 ENSGALG00000028164 3325 0.941 - - - - - - 0.941 - - -
19. METTL24 ENSGALG00000041120 60 0.941 - - - - - - 0.941 - - - methyltransferase like 24 [Source:HGNC Symbol;Acc:HGNC:21566]
20. TCTE1 ENSGALG00000010165 65 0.941 - - - - - - 0.941 - - - t-complex-associated-testis-expressed 1 [Source:HGNC Symbol;Acc:HGNC:11693]
21. HEMK1 ENSGALG00000002253 40 0.941 - - - - - - 0.941 - - - HemK methyltransferase family member 1 [Source:HGNC Symbol;Acc:HGNC:24923]
22. ENSGALG00000003619 ENSGALG00000003619 58 0.941 - - - - - - 0.941 - - -
23. SCUBE1 ENSGALG00000014178 91 0.94 - - - - - - 0.940 - - - signal peptide, CUB domain and EGF like domain containing 1, transcript variant X4
24. GRB14 ENSGALG00000020703 42 0.94 - - - - - - 0.940 - - - growth factor receptor bound protein 14 [Source:HGNC Symbol;Acc:HGNC:4565]
25. GAS6 ENSGALG00000016820 481 0.939 - - - - - - 0.939 - - - growth arrest specific 6 [Source:HGNC Symbol;Acc:HGNC:4168]
26. WDSUB1 ENSGALG00000012574 2038 0.939 - - - - - - 0.939 - - - WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
27. FAM183A 242 0.939 - - - - - - 0.939 - - - family with sequence similarity 183 member A, transcript variant 2
28. TM2D3 ENSGALG00000026271 2566 0.938 - - - - - - 0.938 - - - TM2 domain containing 3 [Source:NCBI gene;Acc:415390]
29. NCAPG2 ENSGALG00000006525 2319 0.938 - - - - - - 0.938 - - - non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]
30. CCNE2 ENSGALG00000040794 1229 0.938 - - - - - - 0.938 - - - cyclin E2 [Source:NCBI gene;Acc:420231]
31. USP54 ENSGALG00000005232 2749 0.938 - - - - - - 0.938 - - - ubiquitin specific peptidase 54 [Source:HGNC Symbol;Acc:HGNC:23513]
32. WIPI1 ENSGALG00000004215 3359 0.937 - - - - - - 0.937 - - - WD repeat domain, phosphoinositide interacting 1 [Source:HGNC Symbol;Acc:HGNC:25471]
33. SPAG9 ENSGALG00000034001 2314 0.937 - - - - - - 0.937 - - - sperm associated antigen 9 [Source:HGNC Symbol;Acc:HGNC:14524]
34. ERMP1 ENSGALG00000000438 1136 0.936 - - - - - - 0.936 - - - endoplasmic reticulum metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:23703]
35. HESX1 ENSGALG00000005506 203 0.935 - - - - - - 0.935 - - - HESX homeobox 1 [Source:NCBI gene;Acc:395864]
36. PKN3 532 0.934 - - - - - - 0.934 - - - protein kinase N3, transcript variant X2
37. MGLL ENSGALG00000032736 612 0.933 - - - - - - 0.933 - - - monoglyceride lipase [Source:NCBI gene;Acc:416024]
38. LFNG ENSGALG00000038515 5178 0.933 - - - - - - 0.933 - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395790]
39. UPK3BL ENSGALG00000001885 1650 0.932 - - - - - - 0.932 - - - uroplakin 3B-like
40. C14orf80 C14orf80 1921 0.932 - - - - - - 0.932 - - -
41. RNF20 ENSGALG00000015548 7199 0.93 - - - - - - 0.930 - - - ring finger protein 20 [Source:NCBI gene;Acc:427310]
42. MESDC1 1013 0.93 - - - - - - 0.930 - - - mesoderm development candidate 1
43. SDK2 ENSGALG00000031895 2682 0.929 - - - - - - 0.929 - - - sidekick cell adhesion molecule 2 [Source:NCBI gene;Acc:395215]
44. SGSM3 ENSGALG00000012033 1839 0.929 - - - - - - 0.929 - - - small G protein signaling modulator 3 [Source:HGNC Symbol;Acc:HGNC:25228]
45. DNAJC12 ENSGALG00000002769 1418 0.928 - - - - - - 0.928 - - - DnaJ heat shock protein family (Hsp40) member C12 [Source:NCBI gene;Acc:423647]
46. XPO7 ENSGALG00000001838 1875 0.927 - - - - - - 0.927 - - - exportin 7 [Source:NCBI gene;Acc:426925]
47. MBTPS1 ENSGALG00000003293 4843 0.927 - - - - - - 0.927 - - - membrane bound transcription factor peptidase, site 1 [Source:HGNC Symbol;Acc:HGNC:15456]
48. RAB1A ENSGALG00000031582 6929 0.927 - - - - - - 0.927 - - - RAB1A, member RAS oncogene family [Source:NCBI gene;Acc:421273]
49. SPG11 ENSGALG00000008180 1890 0.926 - - - - - - 0.926 - - - SPG11, spatacsin vesicle trafficking associated [Source:HGNC Symbol;Acc:HGNC:11226]
50. ATM ENSGALG00000017159 893 0.925 - - - - - - 0.925 - - - ATM serine/threonine kinase [Source:NCBI gene;Acc:395401]
51. TM9SF4 ENSGALG00000006568 567 0.925 - - - - - - 0.925 - - - transmembrane 9 superfamily member 4 [Source:HGNC Symbol;Acc:HGNC:30797]
52. COPS8 ENSGALG00000033385 10166 0.924 - - - - - - 0.924 - - - COP9 signalosome subunit 8 [Source:NCBI gene;Acc:424020]
53. PLCE1 ENSGALG00000039528 151 0.924 - - - - - - 0.924 - - - phospholipase C epsilon 1
54. MST1 ENSGALG00000002722 994 0.923 - - - - - - 0.923 - - - macrophage stimulating 1 (hepatocyte growth factor-like) [Source:NCBI gene;Acc:396135]
55. NUP205 ENSGALG00000011662 4157 0.923 - - - - - - 0.923 - - - nucleoporin 205
56. TPR ENSGALG00000005105 2924 0.923 - - - - - - 0.923 - - - translocated promoter region, nuclear basket protein [Source:HGNC Symbol;Acc:HGNC:12017]
57. NIN ENSGALG00000012361 2284 0.923 - - - - - - 0.923 - - - ninein [Source:HGNC Symbol;Acc:HGNC:14906]
58. DCLK2 ENSGALG00000032386 2253 0.92 - - - - - - 0.920 - - - doublecortin like kinase 2 [Source:HGNC Symbol;Acc:HGNC:19002]
59. FTSJ2 FTSJ2 2951 0.919 - - - - - - 0.919 - - -
60. UBE3B ENSGALG00000013851 1672 0.918 - - - - - - 0.918 - - - ubiquitin protein ligase E3B [Source:NCBI gene;Acc:776286]
61. SCAF4 ENSGALG00000033965 2027 0.918 - - - - - - 0.918 - - - SR-related CTD associated factor 4 [Source:NCBI gene;Acc:418492]
62. NT5C2 ENSGALG00000008179 1760 0.918 - - - - - - 0.918 - - - 5'-nucleotidase, cytosolic II [Source:NCBI gene;Acc:423871]
63. SUGP1 ENSGALG00000042132 2771 0.918 - - - - - - 0.918 - - - SURP and G-patch domain containing 1 [Source:NCBI gene;Acc:428349]
64. SLC25A21 ENSGALG00000010117 536 0.917 - - - - - - 0.917 - - - solute carrier family 25 member 21 [Source:HGNC Symbol;Acc:HGNC:14411]
65. ALDH18A1 ENSGALG00000034655 3038 0.915 - - - - - - 0.915 - - - aldehyde dehydrogenase 18 family member A1, transcript variant X13
66. BPHL ENSGALG00000029659 501 0.912 - - - - - - 0.912 - - - biphenyl hydrolase like [Source:HGNC Symbol;Acc:HGNC:1094]
67. ENSGALG00000002852 ENSGALG00000002852 2687 0.909 - - - - - - 0.909 - - -
68. MPST ENSGALG00000040840 2122 0.908 - - - - - - 0.908 - - - mercaptopyruvate sulfurtransferase [Source:NCBI gene;Acc:418048]
69. SELM SELM 6366 0.906 - - - - - - 0.906 - - -
70. NDUFV3 ENSGALG00000022813 4456 0.904 - - - - - - 0.904 - - - NADH:ubiquinone oxidoreductase subunit V3 [Source:NCBI gene;Acc:418541]
71. ZNF142 ENSGALG00000011393 2078 0.902 - - - - - - 0.902 - - - zinc finger protein 142 [Source:HGNC Symbol;Acc:HGNC:12927]
72. TUBA4A ENSGALG00000000433 1367 0.901 - - - - - - 0.901 - - - tubulin alpha 4a
73. NSMCE4A ENSGALG00000009504 1302 0.898 - - - - - - 0.898 - - - NSE4 homolog A, SMC5-SMC6 complex component
74. GPN3 ENSGALG00000003807 6320 0.896 - - - - - - 0.896 - - - GPN-loop GTPase 3 [Source:HGNC Symbol;Acc:HGNC:30186]
75. ASB6 ENSGALG00000004378 1080 0.895 - - - - - - 0.895 - - - ankyrin repeat and SOCS box containing 6 [Source:NCBI gene;Acc:417194]
76. B4GALT3 ENSGALG00000022891 2825 0.895 - - - - - - 0.895 - - - beta-1,4-galactosyltransferase 3
77. SUN1 ENSGALG00000003781 3442 0.894 - - - - - - 0.894 - - - Sad1 and UNC84 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18587]
78. KANK4 ENSGALG00000010953 726 0.892 - - - - - - 0.892 - - - KN motif and ankyrin repeat domains 4 [Source:HGNC Symbol;Acc:HGNC:27263]
79. PDHX ENSGALG00000033753 2799 0.892 - - - - - - 0.892 - - - pyruvate dehydrogenase complex component X [Source:NCBI gene;Acc:423154]
80. SRP72 ENSGALG00000011403 13666 0.89 - - - - - - 0.890 - - - signal recognition particle 72 [Source:NCBI gene;Acc:422626]
81. DIEXF ENSGALG00000009887 4782 0.89 - - - - - - 0.890 - - - digestive organ expansion factor homolog (zebrafish) [Source:NCBI gene;Acc:421384]
82. ITSN1 ENSGALG00000036677 5727 0.889 - - - - - - 0.889 - - - intersectin 1 [Source:HGNC Symbol;Acc:HGNC:6183]
83. CDC42SE2 ENSGALG00000027258 4725 0.889 - - - - - - 0.889 - - - CDC42 small effector 2 [Source:NCBI gene;Acc:768825]
84. ROR1 ENSGALG00000011019 2155 0.888 - - - - - - 0.888 - - - receptor tyrosine kinase like orphan receptor 1 [Source:NCBI gene;Acc:395179]
85. PAPD7 ENSGALG00000013061 2031 0.888 - - - - - - 0.888 - - - poly(A) RNA polymerase D7, non-canonical [Source:NCBI gene;Acc:770425]
86. TMEM135 2283 0.887 - - - - - - 0.887 - - - transmembrane protein 135, transcript variant X4
87. GPC3 ENSGALG00000006087 3744 0.887 - - - - - - 0.887 - - - glypican 3 [Source:HGNC Symbol;Acc:HGNC:4451]
88. SRPK1 ENSGALG00000037546 1849 0.886 - - - - - - 0.886 - - - SRSF protein kinase 1 [Source:HGNC Symbol;Acc:HGNC:11305]
89. NEK4 ENSGALG00000041428 4473 0.886 - - - - - - 0.886 - - - NIMA related kinase 4 [Source:HGNC Symbol;Acc:HGNC:11399]
90. WDR47 ENSGALG00000002129 2624 0.885 - - - - - - 0.885 - - - WD repeat domain 47 [Source:HGNC Symbol;Acc:HGNC:29141]
91. EIF3I ENSGALG00000003337 28832 0.883 - - - - - - 0.883 - - - eukaryotic translation initiation factor 3 subunit I [Source:NCBI gene;Acc:419653]
92. RBL1 ENSGALG00000001332 2568 0.883 - - - - - - 0.883 - - - RB transcriptional corepressor like 1 [Source:HGNC Symbol;Acc:HGNC:9893]
93. INTS7 ENSGALG00000009843 2395 0.881 - - - - - - 0.881 - - - integrator complex subunit 7 [Source:NCBI gene;Acc:421374]
94. USP20 ENSGALG00000041104 3186 0.88 - - - - - - 0.880 - - - ubiquitin specific peptidase 20 [Source:HGNC Symbol;Acc:HGNC:12619]
95. RFT1 ENSGALG00000001945 2446 0.878 - - - - - - 0.878 - - - RFT1 homolog [Source:NCBI gene;Acc:770487]
96. JMJD7 ENSGALG00000026846 1320 0.878 - - - - - - 0.878 - - - jumonji domain containing 7 [Source:NCBI gene;Acc:423221]
97. CMSS1 ENSGALG00000015267 2954 0.878 - - - - - - 0.878 - - - cms1 ribosomal small subunit homolog (yeast) [Source:NCBI gene;Acc:418381]
98. NEFM ENSGALG00000000317 6992 0.877 - - - - - - 0.877 - - - neurofilament medium [Source:NCBI gene;Acc:396206]
99. TOP3B ENSGALG00000030051 5953 0.877 - - - - - - 0.877 - - - DNA topoisomerase III beta [Source:NCBI gene;Acc:416771]
100. PARD3B ENSGALG00000042645 2893 0.875 - - - - - - 0.875 - - - par-3 family cell polarity regulator beta [Source:HGNC Symbol;Acc:HGNC:14446]

There are 158 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA