Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CCNI

Gene Name Gene ID Reads Annotation
CCNI ENSGALG00000011457 3203 cyclin I [Source:HGNC Symbol;Acc:HGNC:1595]











Genes with expression patterns similar to CCNI

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CCNI ENSGALG00000011457 3203 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cyclin I [Source:HGNC Symbol;Acc:HGNC:1595]
2. TRAPPC12 ENSGALG00000016387 2593 2.662 - - - 0.789 - - - 0.974 - 0.899 trafficking protein particle complex 12 [Source:HGNC Symbol;Acc:HGNC:24284]
3. CUL5 ENSGALG00000017165 2480 2.467 - - 0.767 0.784 - - - - - 0.916 cullin 5 [Source:HGNC Symbol;Acc:HGNC:2556]
4. BTG1L ENSGALG00000004676 2293 2.433 - - 0.818 0.833 - - - - - 0.782 protein BTG1-like
5. GTSE1 ENSGALG00000004897 2865 1.829 - - - - - - - 0.977 - 0.852 G2 and S-phase expressed 1 [Source:NCBI gene;Acc:425204]
6. ZC3H11A ENSGALG00000000541 2712 1.826 - - 0.840 - - - - 0.986 - - zinc finger CCCH-type containing 11A [Source:NCBI gene;Acc:421172]
7. SZT2 ENSGALG00000028561 255 1.819 - - 0.832 - - - - 0.987 - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
8. LRRC42 ENSGALG00000010743 384 1.819 - - 0.831 - - - - 0.988 - - leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:HGNC:28792]
9. WBP4 ENSGALG00000016949 5858 1.813 - - 0.828 - - - - 0.985 - - WW domain binding protein 4 [Source:NCBI gene;Acc:418829]
10. CHGA ENSGALG00000010820 1028 1.793 - - 0.803 - - - - 0.990 - - chromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]
11. ST14 ENSGALG00000001331 1655 1.763 - - 0.785 - - - - 0.978 - - suppression of tumorigenicity 14 [Source:HGNC Symbol;Acc:HGNC:11344]
12. DBN1 ENSGALG00000033405 216 1.741 - - 0.849 0.892 - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
13. KIAA1551 ENSGALG00000045168 3435 1.735 - - - - - - - 0.954 - 0.781 KIAA1551, transcript variant X1
14. VDAC2 ENSGALG00000005002 12592 1.729 - - - 0.768 - - - 0.961 - - voltage dependent anion channel 2 [Source:NCBI gene;Acc:395498]
15. SQLE ENSGALG00000036915 4172 1.718 - - 0.827 - - - - - - 0.891 squalene epoxidase [Source:NCBI gene;Acc:420335]
16. COMMD1 ENSGALG00000008931 12202 1.706 - - - - - - - 0.879 - 0.827 copper metabolism domain containing 1 [Source:HGNC Symbol;Acc:HGNC:23024]
17. BAG5 ENSGALG00000031062 4498 1.705 - - 0.843 0.862 - - - - - - BCL2 associated athanogene 5 [Source:NCBI gene;Acc:423482]
18. BRF1 ENSGALG00000011705 3406 1.705 - - 0.738 - - - - 0.967 - - BRF1, RNA polymerase III transcription initiation factor subunit [Source:HGNC Symbol;Acc:HGNC:11551]
19. ARPC1A ENSGALG00000004693 11583 1.692 - - - 0.808 - - - - - 0.884 actin related protein 2/3 complex subunit 1A [Source:NCBI gene;Acc:770269]
20. CYB5R3 ENSGALG00000014122 7664 1.684 - - - 0.707 - - - 0.977 - - cytochrome b5 reductase 3 [Source:NCBI gene;Acc:418220]
21. HPS5 ENSGALG00000027716 2466 1.669 - - 0.809 0.860 - - - - - - HPS5, biogenesis of lysosomal organelles complex 2 subunit 2
22. PSMD14 ENSGALG00000011128 13335 1.659 - - 0.814 0.845 - - - - - - proteasome 26S subunit, non-ATPase 14 [Source:NCBI gene;Acc:424189]
23. ISCA1 ENSGALG00000012606 10342 1.655 - - 0.852 - - - - - - 0.803 iron-sulfur cluster assembly 1 [Source:NCBI gene;Acc:427463]
24. C18orf8 C18orf8 1512 1.648 - - 0.860 0.788 - - - - - -
25. PANK1 ENSGALG00000006431 2910 1.625 - - 0.773 0.852 - - - - - - pantothenate kinase 1 [Source:HGNC Symbol;Acc:HGNC:8598]
26. ELMOD1 ENSGALG00000017169 2303 1.621 - - 0.737 0.884 - - - - - - ELMO domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25334]
27. HOXA7 ENSGALG00000026989 6746 1.617 - - 0.777 - - - - 0.840 - - homeobox A7 [Source:NCBI gene;Acc:395290]
28. AAMP ENSGALG00000011445 2528 1.616 - - 0.805 0.811 - - - - - - angio associated migratory cell protein [Source:NCBI gene;Acc:769880]
29. HINT3 ENSGALG00000044342 5674 1.596 - - 0.762 0.834 - - - - - - histidine triad nucleotide binding protein 3 [Source:HGNC Symbol;Acc:HGNC:18468]
30. PDIA5 ENSGALG00000011689 6913 1.58 - - 0.797 - - - - - - 0.783 protein disulfide isomerase family A member 5 [Source:HGNC Symbol;Acc:HGNC:24811]
31. SESN1 ENSGALG00000015286 2387 1.577 - - 0.776 0.801 - - - - - - sestrin 1 [Source:HGNC Symbol;Acc:HGNC:21595]
32. OVCA2 ENSGALG00000045371 2862 1.572 - - 0.752 0.820 - - - - - - OVCA2, serine hydrolase domain containing [Source:HGNC Symbol;Acc:HGNC:24203]
33. C1orf21 ENSGALG00000020922 4035 1.571 - - 0.722 0.849 - - - - - - chromosome 1 open reading frame 21 [Source:HGNC Symbol;Acc:HGNC:15494]
34. ZNF335 ENSGALG00000041370 4740 1.57 - - 0.744 0.826 - - - - - - zinc finger protein 335 [Source:NCBI gene;Acc:396131]
35. SSR2 ENSGALG00000000764 32190 1.563 - - - 0.840 - - - - - 0.723 signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
36. CASP8AP2 ENSGALG00000015611 5657 1.56 - - 0.746 - - - - - - 0.814 caspase 8 associated protein 2 [Source:HGNC Symbol;Acc:HGNC:1510]
37. EAPP ENSGALG00000010007 5080 1.551 - - 0.757 - - - - - - 0.794 E2F associated phosphoprotein [Source:NCBI gene;Acc:423319]
38. FTD FTD 3041 1.546 - - 0.803 0.743 - - - - - -
39. COG7 ENSGALG00000006156 4072 1.541 - - 0.759 0.782 - - - - - - component of oligomeric golgi complex 7 [Source:NCBI gene;Acc:416578]
40. SHMT1 ENSGALG00000005046 1430 1.54 - - 0.785 0.755 - - - - - - serine hydroxymethyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:10850]
41. USP5 ENSGALG00000014525 21883 1.537 - - - 0.773 - - - 0.764 - - ubiquitin specific peptidase 5 [Source:HGNC Symbol;Acc:HGNC:12628]
42. NUBP1 ENSGALG00000007241 3791 1.528 - - 0.815 0.713 - - - - - - nucleotide binding protein 1 [Source:NCBI gene;Acc:416634]
43. POGZ ENSGALG00000036365 4056 1.518 - - 0.769 0.749 - - - - - - pogo transposable element with ZNF domain, transcript variant X2
44. SELK SELK 15022 1.502 - - 0.789 0.713 - - - - - -
45. FECH ENSGALG00000038461 3491 1.499 - - 0.774 - - - - - - 0.725 ferrochelatase [Source:NCBI gene;Acc:374020]
46. NPM1 ENSGALG00000002197 24109 1.494 - - 0.776 - - - - - - 0.718 nucleophosmin [Source:NCBI gene;Acc:396203]
47. SMC5 ENSGALG00000015118 1799 1.49 - - 0.746 0.744 - - - - - - structural maintenance of chromosomes 5 [Source:NCBI gene;Acc:431608]
48. SLC39A6 ENSGALG00000013209 1754 1.482 - - 0.741 - - - - - - 0.741 solute carrier family 39 member 6 [Source:HGNC Symbol;Acc:HGNC:18607]
49. CNTRL ENSGALG00000001513 1773 1.472 - - 0.765 0.707 - - - - - - centriolin [Source:NCBI gene;Acc:417121]
50. TM9SF3 ENSGALG00000005534 15290 1.459 - - 0.737 0.722 - - - - - - transmembrane 9 superfamily member 3
51. RPL26 RPL26 343071 1.437 - - 0.725 - - - - - - 0.712
52. GPBP1 ENSGALG00000014724 5454 1.43 - - - - - - - 0.725 - 0.705 GC-rich promoter binding protein 1 [Source:HGNC Symbol;Acc:HGNC:29520]
53. C7H2ORF76 ENSGALG00000012113 1947 0.992 - - - - - - - 0.992 - - chromosome 7 open reading frame, human C2orf76 [Source:NCBI gene;Acc:424274]
54. CLEC3B ENSGALG00000030969 363 0.991 - - - - - - - 0.991 - - C-type lectin domain family 3 member B [Source:NCBI gene;Acc:395386]
55. IBA57 ENSGALG00000005328 4362 0.991 - - - - - - - 0.991 - - IBA57 homolog, iron-sulfur cluster assembly [Source:NCBI gene;Acc:420396]
56. N4BP2L1 ENSGALG00000017072 1371 0.991 - - - - - - - 0.991 - - NEDD4 binding protein 2 like 1, transcript variant X2
57. PNPT1 ENSGALG00000043545 1306 0.99 - - - - - - - 0.990 - - polyribonucleotide nucleotidyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:23166]
58. gga-mir-6681 ENSGALG00000027840 546 0.99 - - - - - - - 0.990 - - gga-mir-6681 [Source:miRBase;Acc:MI0022502]
59. ENSGALG00000021835 ENSGALG00000021835 424 0.99 - - - - - - - 0.990 - -
60. ASAP2 ENSGALG00000016419 1393 0.99 - - - - - - - 0.990 - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
61. BIN1 ENSGALG00000011541 2273 0.99 - - - - - - - 0.990 - - bridging integrator 1 [Source:NCBI gene;Acc:424228]
62. PRKAG2 ENSGALG00000006219 504 0.99 - - - - - - - 0.990 - - protein kinase AMP-activated non-catalytic subunit gamma 2 [Source:NCBI gene;Acc:420435]
63. xcc-b100_1894L ENSGALG00000007564 462 0.989 - - - - - - - 0.989 - - UPF0061 protein xcc-b100_1894-like
64. ENSGALG00000016701 ENSGALG00000016701 418 0.989 - - - - - - - 0.989 - -
65. NGFR ENSGALG00000035950 13452 0.989 - - - - - - - 0.989 - - nerve growth factor receptor [Source:NCBI gene;Acc:425805]
66. C16orf93 C16orf93 3351 0.989 - - - - - - - 0.989 - -
67. FRYL ENSGALG00000014103 314 0.989 - - - - - - - 0.989 - - FRY like transcription coactivator [Source:HGNC Symbol;Acc:HGNC:29127]
68. AGO1 ENSGALG00000002249 125 0.989 - - - - - - - 0.989 - - argonaute 1, RISC catalytic component [Source:NCBI gene;Acc:428222]
69. LMO4 ENSGALG00000006252 3686 0.989 - - - - - - - 0.989 - - LIM domain only 4 [Source:NCBI gene;Acc:373901]
70. ZNF148 ENSGALG00000012049 365 0.989 - - - - - - - 0.989 - - zinc finger protein 148 [Source:HGNC Symbol;Acc:HGNC:12933]
71. RFX3 ENSGALG00000010179 305 0.989 - - - - - - - 0.989 - - regulatory factor X3 [Source:HGNC Symbol;Acc:HGNC:9984]
72. GMFB ENSGALG00000012208 894 0.989 - - - - - - - 0.989 - - glia maturation factor beta [Source:NCBI gene;Acc:423560]
73. ENSGALG00000026309 ENSGALG00000026309 360 0.988 - - - - - - - 0.988 - -
74. MAN1A1 ENSGALG00000014878 1061 0.988 - - - - - - - 0.988 - - mannosidase alpha class 1A member 1 [Source:HGNC Symbol;Acc:HGNC:6821]
75. GPR155 ENSGALG00000014209 1281 0.988 - - - - - - - 0.988 - - G protein-coupled receptor 155 [Source:HGNC Symbol;Acc:HGNC:22951]
76. SLC37A4 ENSGALG00000007716 2263 0.987 - - - - - - - 0.987 - - solute carrier family 37 member 4 [Source:HGNC Symbol;Acc:HGNC:4061]
77. GHR_1 ENSGALG00000014855 198 0.987 - - - - - - - 0.987 - - growth hormone receptor [Source:NCBI gene;Acc:408184]
78. THAP4 ENSGALG00000006283 1707 0.987 - - - - - - - 0.987 - - THAP domain containing 4 [Source:HGNC Symbol;Acc:HGNC:23187]
79. COQ5 ENSGALG00000007185 5614 0.987 - - - - - - - 0.987 - - coenzyme Q5, methyltransferase [Source:NCBI gene;Acc:416975]
80. SENP2 ENSGALG00000031128 1162 0.986 - - - - - - - 0.986 - - SUMO specific peptidase 2 [Source:HGNC Symbol;Acc:HGNC:23116]
81. TBC1D19 ENSGALG00000029673 1868 0.986 - - - - - - - 0.986 - - TBC1 domain family member 19 [Source:HGNC Symbol;Acc:HGNC:25624]
82. TBC1D16 ENSGALG00000007054 2324 0.986 - - - - - - - 0.986 - - TBC1 domain family member 16 [Source:HGNC Symbol;Acc:HGNC:28356]
83. FBXL7 ENSGALG00000031947 2480 0.985 - - - - - - - 0.985 - - F-box and leucine rich repeat protein 7 [Source:HGNC Symbol;Acc:HGNC:13604]
84. MED20 ENSGALG00000003474 4583 0.985 - - - - - - - 0.985 - - mediator complex subunit 20 [Source:NCBI gene;Acc:419926]
85. SCARF1 2103 0.985 - - - - - - - 0.985 - - scavenger receptor class F member 1, transcript variant X2
86. CDC37L1 ENSGALG00000014448 2283 0.985 - - - - - - - 0.985 - - cell division cycle 37 like 1 [Source:HGNC Symbol;Acc:HGNC:17179]
87. SIAH2 ENSGALG00000010395 2126 0.985 - - - - - - - 0.985 - - siah E3 ubiquitin protein ligase 2 [Source:HGNC Symbol;Acc:HGNC:10858]
88. ECHDC3 ENSGALG00000006690 1299 0.984 - - - - - - - 0.984 - - enoyl-CoA hydratase domain containing 3 [Source:NCBI gene;Acc:419098]
89. CLASP2 ENSGALG00000032647 1821 0.984 - - - - - - - 0.984 - - cytoplasmic linker associated protein 2 [Source:NCBI gene;Acc:420724]
90. BOC ENSGALG00000015152 4868 0.984 - - - - - - - 0.984 - - BOC cell adhesion associated, oncogene regulated [Source:HGNC Symbol;Acc:HGNC:17173]
91. ENSGALG00000005785 ENSGALG00000005785 1570 0.984 - - - - - - - 0.984 - -
92. ALDH6 ALDH6 771 0.983 - - - - - - - 0.983 - -
93. KIF3B ENSGALG00000006604 2968 0.983 - - - - - - - 0.983 - - kinesin family member 3B [Source:NCBI gene;Acc:419284]
94. ENSGALG00000025773 ENSGALG00000025773 977 0.983 - - - - - - - 0.983 - -
95. C5H15ORF57 C5H15ORF57 4113 0.982 - - - - - - - 0.982 - -
96. YY1 ENSGALG00000017388 1933 0.982 - - - - - - - 0.982 - - YY1 transcription factor [Source:NCBI gene;Acc:423455]
97. PDCD7 ENSGALG00000021027 3807 0.982 - - - - - - - 0.982 - - programmed cell death 7 [Source:HGNC Symbol;Acc:HGNC:8767]
98. ATP6V0E2 ENSGALG00000020754 2648 0.981 - - - - - - - 0.981 - - ATPase H+ transporting V0 subunit e2 [Source:NCBI gene;Acc:769770]
99. SLC4A3 ENSGALG00000011224 2161 0.981 - - - - - - - 0.981 - - solute carrier family 4 member 3 [Source:HGNC Symbol;Acc:HGNC:11029]
100. CNOT2 ENSGALG00000010042 7612 0.974 - - - - - - - 0.974 - - CCR4-NOT transcription complex subunit 2 [Source:NCBI gene;Acc:417851]

There are 763 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA