Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CCNE1

Gene Name Gene ID Reads Annotation
CCNE1 ENSGALG00000004494 4945 cyclin E1 [Source:NCBI gene;Acc:426117]











Genes with expression patterns similar to CCNE1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CCNE1 ENSGALG00000004494 4945 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cyclin E1 [Source:NCBI gene;Acc:426117]
2. SDF4 ENSGALG00000001872 6382 1.435 - - - - - - 0.718 0.717 - - stromal cell derived factor 4 [Source:NCBI gene;Acc:419423]
3. PANX2 ENSGALG00000000003 2185 0.979 - - - - - - 0.979 - - - pannexin 2 [Source:HGNC Symbol;Acc:HGNC:8600]
4. PHF14 ENSGALG00000038041 13687 0.965 - - - - - - 0.965 - - - PHD finger protein 14 [Source:NCBI gene;Acc:420583]
5. ATL2 ENSGALG00000037289 7926 0.963 - - - - - - 0.963 - - - atlastin GTPase 2 [Source:HGNC Symbol;Acc:HGNC:24047]
6. DERL2 ENSGALG00000041844 4509 0.953 - - - - - - 0.953 - - - derlin 2 [Source:HGNC Symbol;Acc:HGNC:17943]
7. HK1 ENSGALG00000004222 10733 0.947 - - - - - - 0.947 - - - hexokinase 1 [Source:NCBI gene;Acc:373889]
8. NFS1 ENSGALG00000001568 7113 0.945 - - - - - - 0.945 - - - NFS1, cysteine desulfurase [Source:NCBI gene;Acc:419133]
9. RTN4IP1 ENSGALG00000015343 4366 0.942 - - - - - - 0.942 - - - reticulon 4 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:18647]
10. PCBD1 ENSGALG00000027835 18019 0.94 - - - - - - 0.940 - - - pterin-4 alpha-carbinolamine dehydratase 1 [Source:NCBI gene;Acc:395729]
11. SEC23A ENSGALG00000010150 11679 0.939 - - - - - - 0.939 - - - Sec23 homolog A, coat complex II component [Source:HGNC Symbol;Acc:HGNC:10701]
12. DUSP19 ENSGALG00000043268 5543 0.939 - - - - - - 0.939 - - - dual specificity phosphatase 19 [Source:HGNC Symbol;Acc:HGNC:18894]
13. SMN ENSGALG00000002430 7515 0.938 - - - - - - 0.938 - - - survival of motor neuron [Source:NCBI gene;Acc:374025]
14. SELK SELK 15022 0.926 - - - - - - 0.926 - - -
15. ACVR2B ENSGALG00000006158 8692 0.915 - - - - - - 0.915 - - - activin A receptor type 2B [Source:NCBI gene;Acc:374213]
16. PHB ENSGALG00000038604 21632 0.891 - - - - - - 0.891 - - - prohibitin [Source:NCBI gene;Acc:419980]
17. AP3S1 ENSGALG00000002341 12388 0.883 - - - - - - 0.883 - - - adaptor related protein complex 3 sigma 1 subunit [Source:NCBI gene;Acc:427389]
18. TFDP2 ENSGALG00000025759 13407 0.88 - - - - - - 0.880 - - - transcription factor Dp-2 [Source:NCBI gene;Acc:424780]
19. MRPL50 ENSGALG00000015543 11649 0.844 - - - - - - - 0.844 - - mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
20. NCAM1 ENSGALG00000007839 19929 0.843 - - - - - - 0.843 - - - Gallus gallus neural cell adhesion molecule 1 (NCAM1), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001242604]
21. CLTC ENSGALG00000005139 22130 0.841 - - - - - - 0.841 - - - clathrin heavy chain [Source:NCBI gene;Acc:395272]
22. NUPL2 ENSGALG00000010942 2442 0.831 - - - - - - - 0.831 - - nucleoporin like 2 [Source:NCBI gene;Acc:420614]
23. RBM45 ENSGALG00000009202 6057 0.814 - - - - - - - 0.814 - - RNA binding motif protein 45 [Source:NCBI gene;Acc:424132]
24. UBFD1 ENSGALG00000006117 5242 0.812 - - - - - - - 0.812 - - ubiquitin family domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30565]
25. SPTSSA ENSGALG00000025755 3361 0.809 - - - - - - - 0.809 - - serine palmitoyltransferase small subunit A [Source:NCBI gene;Acc:423318]
26. MCCC2 ENSGALG00000036622 4184 0.791 - - - - - - - 0.791 - - methylcrotonoyl-CoA carboxylase 2
27. GPN1 ENSGALG00000016505 4329 0.788 - - - - - - - 0.788 - - GPN-loop GTPase 1 [Source:HGNC Symbol;Acc:HGNC:17030]
28. MIER1 ENSGALG00000011118 1418 0.788 - - - - - - - 0.788 - - MIER1 transcriptional regulator [Source:NCBI gene;Acc:424702]
29. MRPL2 ENSGALG00000008597 16500 0.787 - - - - - - - 0.787 - - mitochondrial ribosomal protein L2 [Source:HGNC Symbol;Acc:HGNC:14056]
30. TMEM258 ENSGALG00000038292 31116 0.783 - - - - - - - 0.783 - - transmembrane protein 258 [Source:NCBI gene;Acc:422964]
31. ATP5C1 53961 0.782 - - - - - - 0.782 - - - ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1, transcript variant X1
32. HCN2 ENSGALG00000001342 7506 0.78 - - - - - - - 0.780 - - hyperpolarization activated cyclic nucleotide gated potassium and sodium channel 2 [Source:HGNC Symbol;Acc:HGNC:4846]
33. MIA2 ENSGALG00000010189 1223 0.777 - - - - - - - 0.777 - - melanoma inhibitory activity 2, transcript variant X5
34. SSR1 ENSGALG00000012798 62626 0.775 - - - - - - - 0.775 - - signal sequence receptor subunit 1 [Source:NCBI gene;Acc:420871]
35. PLEKHA5 ENSGALG00000013134 3656 0.771 - - - - - - - 0.771 - - pleckstrin homology domain containing A5 [Source:HGNC Symbol;Acc:HGNC:30036]
36. C20H20ORF111 C20H20ORF111 4029 0.769 - - - - - - - 0.769 - -
37. MTFMT ENSGALG00000007353 805 0.766 - - - - - - 0.766 - - - mitochondrial methionyl-tRNA formyltransferase [Source:HGNC Symbol;Acc:HGNC:29666]
38. BCAS1 ENSGALG00000007796 379 0.765 - - - - - - 0.765 - - - breast carcinoma amplified sequence 1 [Source:HGNC Symbol;Acc:HGNC:974]
39. CCDC132 CCDC132 2632 0.765 - - - - - - - 0.765 - -
40. CAMKK2 ENSGALG00000040131 2795 0.765 - - - - - - 0.765 - - - calcium/calmodulin dependent protein kinase kinase 2, transcript variant X9
41. CETN2 ENSGALG00000007510 1688 0.765 - - - - - - 0.765 - - - centrin 2 [Source:NCBI gene;Acc:422303]
42. GCC2 ENSGALG00000016806 1085 0.764 - - - - - - 0.764 - - - GRIP and coiled-coil domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23218]
43. UBAC1 ENSGALG00000042564 598 0.764 - - - - - - 0.764 - - - UBA domain containing 1 [Source:NCBI gene;Acc:427754]
44. SLC1A1 ENSGALG00000010187 637 0.764 - - - - - - 0.764 - - - solute carrier family 1 member 1 [Source:HGNC Symbol;Acc:HGNC:10939]
45. SETD1B ENSGALG00000004324 2897 0.764 - - - - - - - 0.764 - - SET domain containing 1B [Source:NCBI gene;Acc:416851]
46. HACE1 ENSGALG00000015415 1194 0.764 - - - - - - 0.764 - - - HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:421788]
47. SDCCAG8 ENSGALG00000010713 311 0.764 - - - - - - 0.764 - - - serologically defined colon cancer antigen 8, transcript variant X5
48. POPDC3 ENSGALG00000027420 700 0.763 - - - - - - 0.763 - - - popeye domain containing 3 [Source:NCBI gene;Acc:395434]
49. LMNB2 ENSGALG00000000470 4364 0.763 - - - - - - 0.763 - - - lamin B2 [Source:NCBI gene;Acc:396222]
50. KLHL29 ENSGALG00000016495 582 0.762 - - - - - - 0.762 - - - kelch like family member 29 [Source:HGNC Symbol;Acc:HGNC:29404]
51. SHQ1 ENSGALG00000007798 1982 0.761 - - - - - - 0.761 - - - SHQ1, H/ACA ribonucleoprotein assembly factor [Source:HGNC Symbol;Acc:HGNC:25543]
52. TRAPPC6B ENSGALG00000010157 7567 0.761 - - - - - - - 0.761 - - trafficking protein particle complex 6B [Source:NCBI gene;Acc:423337]
53. ENSGALG00000002923 ENSGALG00000002923 2233 0.76 - - - - - - 0.760 - - -
54. AKAP7 ENSGALG00000029794 3287 0.76 - - - - - - 0.760 - - - A-kinase anchoring protein 7 [Source:HGNC Symbol;Acc:HGNC:377]
55. SREBF2 ENSGALG00000041687 4519 0.76 - - - - - - 0.760 - - - sterol regulatory element binding transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:11290]
56. MOB2 ENSGALG00000030499 3658 0.758 - - - - - - 0.758 - - - MOB kinase activator 2 [Source:HGNC Symbol;Acc:HGNC:24904]
57. NPHP3 ENSGALG00000034586 1465 0.758 - - - - - - 0.758 - - - nephrocystin 3, transcript variant X1
58. MOB1B ENSGALG00000011573 567 0.757 - - - - - - 0.757 - - - MOB kinase activator 1B [Source:HGNC Symbol;Acc:HGNC:29801]
59. ATG16L1 ENSGALG00000001619 3562 0.757 - - - - - - - 0.757 - - autophagy related 16 like 1 [Source:HGNC Symbol;Acc:HGNC:21498]
60. PNO1 ENSGALG00000009093 11153 0.756 - - - - - - 0.756 - - - partner of NOB1 homolog [Source:NCBI gene;Acc:769547]
61. PANK1 ENSGALG00000006431 2910 0.756 - - - - - - - 0.756 - - pantothenate kinase 1 [Source:HGNC Symbol;Acc:HGNC:8598]
62. BFAR ENSGALG00000003111 1778 0.755 - - - - - - 0.755 - - - bifunctional apoptosis regulator [Source:HGNC Symbol;Acc:HGNC:17613]
63. IRAK2 ENSGALG00000008407 5934 0.755 - - - - - - 0.755 - - - interleukin 1 receptor associated kinase 2 [Source:NCBI gene;Acc:416118]
64. LEPROTL1 ENSGALG00000024482 4251 0.754 - - - - - - 0.754 - - - leptin receptor overlapping transcript-like 1
65. DNAJA3 ENSGALG00000007821 3963 0.754 - - - - - - 0.754 - - - DnaJ heat shock protein family (Hsp40) member A3 [Source:HGNC Symbol;Acc:HGNC:11808]
66. MAP1LC3A ENSGALG00000038721 2230 0.753 - - - - - - 0.753 - - - microtubule associated protein 1 light chain 3 alpha
67. ENSGALG00000026041 ENSGALG00000026041 13390 0.753 - - - - - - 0.753 - - -
68. ARHGAP29 ENSGALG00000005683 3622 0.752 - - - - - - 0.752 - - - Rho GTPase activating protein 29 [Source:NCBI gene;Acc:424488]
69. AGA ENSGALG00000010716 2299 0.752 - - - - - - - 0.752 - - aspartylglucosaminidase [Source:NCBI gene;Acc:422558]
70. NDUFB8 ENSGALG00000005704 5781 0.752 - - - - - - 0.752 - - - NADH:ubiquinone oxidoreductase subunit B8 [Source:NCBI gene;Acc:423763]
71. CLCN3 ENSGALG00000009674 3704 0.751 - - - - - - 0.751 - - - chloride voltage-gated channel 3 [Source:HGNC Symbol;Acc:HGNC:2021]
72. INTS10 ENSGALG00000010130 6320 0.751 - - - - - - 0.751 - - - integrator complex subunit 10 [Source:NCBI gene;Acc:422489]
73. ABCD3 ENSGALG00000005647 4844 0.751 - - - - - - 0.751 - - - ATP binding cassette subfamily D member 3 [Source:NCBI gene;Acc:424487]
74. DCAF6 ENSGALG00000015435 3704 0.751 - - - - - - - 0.751 - - DDB1 and CUL4 associated factor 6 [Source:HGNC Symbol;Acc:HGNC:30002]
75. METTL11A METTL11A 11876 0.751 - - - - - - 0.751 - - -
76. ATN1 ENSGALG00000014554 3270 0.751 - - - - - - 0.751 - - - atrophin 1 [Source:HGNC Symbol;Acc:HGNC:3033]
77. DISP1 3281 0.751 - - - - - - 0.751 - - - dispatched RND transporter family member 1, transcript variant X3
78. EIF4G3 ENSGALG00000010084 5881 0.75 - - - - - - 0.750 - - - eukaryotic translation initiation factor 4 gamma 3 [Source:HGNC Symbol;Acc:HGNC:3298]
79. PPP3R1 ENSGALG00000023648 3417 0.75 - - - - - - 0.750 - - - protein phosphatase 3 regulatory subunit B, alpha [Source:NCBI gene;Acc:378804]
80. RRN3 ENSGALG00000041989 3934 0.75 - - - - - - 0.750 - - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
81. RBBP6 ENSGALG00000006043 9708 0.75 - - - - - - 0.750 - - - RB binding protein 6, ubiquitin ligase [Source:HGNC Symbol;Acc:HGNC:9889]
82. IMPACT ENSGALG00000015093 1334 0.749 - - - - - - 0.749 - - - impact RWD domain protein [Source:HGNC Symbol;Acc:HGNC:20387]
83. MED6 ENSGALG00000029743 9414 0.749 - - - - - - 0.749 - - - mediator complex subunit 6 [Source:NCBI gene;Acc:426282]
84. WWC1 ENSGALG00000001826 4666 0.749 - - - - - - - 0.749 - - WW and C2 domain containing 1 [Source:NCBI gene;Acc:416167]
85. gga-mir-6643 ENSGALG00000027935 4442 0.747 - - - - - - 0.747 - - - gga-mir-6643 [Source:miRBase;Acc:MI0022462]
86. CAPN15 ENSGALG00000002018 3353 0.747 - - - - - - - 0.747 - - calpain 15 [Source:HGNC Symbol;Acc:HGNC:11182]
87. MYST2 MYST2 8078 0.746 - - - - - - 0.746 - - -
88. EI24 ENSGALG00000038097 24081 0.746 - - - - - - 0.746 - - - EI24, autophagy associated transmembrane protein [Source:NCBI gene;Acc:419711]
89. YBX1 ENSGALG00000004848 20992 0.746 - - - - - - 0.746 - - - Y-box binding protein 1 [Source:NCBI gene;Acc:386575]
90. MSRA ENSGALG00000028032 2607 0.746 - - - - - - 0.746 - - - methionine sulfoxide reductase A [Source:HGNC Symbol;Acc:HGNC:7377]
91. TMEM108 ENSGALG00000036412 2903 0.745 - - - - - - 0.745 - - - transmembrane protein 108 [Source:HGNC Symbol;Acc:HGNC:28451]
92. AK6 ENSGALG00000020534 4791 0.745 - - - - - - 0.745 - - - adenylate kinase 6 [Source:NCBI gene;Acc:425215]
93. RILPL2 ENSGALG00000003321 5632 0.745 - - - - - - 0.745 - - - Rab interacting lysosomal protein like 2 [Source:HGNC Symbol;Acc:HGNC:28787]
94. ATE1 ENSGALG00000009502 3751 0.744 - - - - - - 0.744 - - - arginyltransferase 1 [Source:NCBI gene;Acc:423936]
95. SCRN1 ENSGALG00000011176 3783 0.744 - - - - - - 0.744 - - - secernin 1 [Source:HGNC Symbol;Acc:HGNC:22192]
96. TBCCD1 ENSGALG00000006566 2696 0.743 - - - - - - 0.743 - - - TBCC domain containing 1 [Source:NCBI gene;Acc:424869]
97. NSUN2 ENSGALG00000013064 2005 0.742 - - - - - - - 0.742 - - NOP2/Sun RNA methyltransferase family member 2 [Source:NCBI gene;Acc:420938]
98. POLR3E ENSGALG00000007008 4010 0.742 - - - - - - 0.742 - - - RNA polymerase III subunit E [Source:HGNC Symbol;Acc:HGNC:30347]
99. GNS ENSGALG00000009856 3045 0.742 - - - - - - - 0.742 - - glucosamine (N-acetyl)-6-sulfatase [Source:NCBI gene;Acc:417829]
100. AP2B1 ENSGALG00000042125 13229 0.741 - - - - - - 0.741 - - - adaptor related protein complex 2 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:563]

There are 93 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA