Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CCND1

Gene Name Gene ID Reads Annotation
CCND1 ENSGALG00000007555 6715 cyclin D1 [Source:NCBI gene;Acc:396341]











Genes with expression patterns similar to CCND1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CCND1 ENSGALG00000007555 6715 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cyclin D1 [Source:NCBI gene;Acc:396341]
2. INTS10 ENSGALG00000010130 6320 2.548 - - - - - - 0.957 0.703 - 0.888 integrator complex subunit 10 [Source:NCBI gene;Acc:422489]
3. NARS ENSGALG00000040506 9506 1.81 - - - - - - 0.902 - - 0.908 asparaginyl-tRNA synthetase [Source:NCBI gene;Acc:426856]
4. SF3A3 ENSGALG00000001540 9664 1.751 - - - - - - 0.918 - - 0.833 splicing factor 3a subunit 3 [Source:HGNC Symbol;Acc:HGNC:10767]
5. DNA2 ENSGALG00000004037 5426 1.747 - - - - - - 0.957 - - 0.790 DNA replication helicase/nuclease 2 [Source:NCBI gene;Acc:423688]
6. METTL11A METTL11A 11876 1.727 - - - - - - 0.974 0.753 - -
7. RAB20 ENSGALG00000016844 3250 1.727 - - - - - - 0.866 - - 0.861 RAB20, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18260]
8. GCSH ENSGALG00000032679 29231 1.713 - - - - - - - 0.800 - 0.913 glycine cleavage system protein H [Source:NCBI gene;Acc:415803]
9. THOC2 ENSGALG00000008507 9501 1.687 0.747 - - - - - 0.940 - - - THO complex 2 [Source:HGNC Symbol;Acc:HGNC:19073]
10. RBBP6 ENSGALG00000006043 9708 1.682 0.726 - - - - - 0.956 - - - RB binding protein 6, ubiquitin ligase [Source:HGNC Symbol;Acc:HGNC:9889]
11. LACTB2 ENSGALG00000038745 3460 1.659 - - - - - - 0.951 - - 0.708 lactamase beta 2 [Source:NCBI gene;Acc:420178]
12. AP3S1 ENSGALG00000002341 12388 1.649 - - - - - - 0.866 - - 0.783 adaptor related protein complex 3 sigma 1 subunit [Source:NCBI gene;Acc:427389]
13. HSPE1 ENSGALG00000009070 87567 1.639 - - - - - 0.753 - - - 0.886 heat shock protein family E (Hsp10) member 1 [Source:NCBI gene;Acc:395948]
14. ATRX ENSGALG00000007843 34172 1.635 0.749 - - - - - 0.886 - - - ATRX, chromatin remodeler [Source:HGNC Symbol;Acc:HGNC:886]
15. GFM1 ENSGALG00000009634 7213 1.632 - - - - - - 0.921 0.711 - - G elongation factor mitochondrial 1 [Source:HGNC Symbol;Acc:HGNC:13780]
16. ZMYM2 ENSGALG00000017139 3747 1.631 - - - - - - 0.840 0.791 - - zinc finger MYM-type containing 2, transcript variant X10
17. CHRAC1 ENSGALG00000040823 5695 1.63 - - - - - - - 0.781 - 0.849 chromatin accessibility complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:13544]
18. SUV39H2 ENSGALG00000013920 4360 1.622 - - - - - - - 0.748 - 0.874 suppressor of variegation 3-9 homolog 2 [Source:NCBI gene;Acc:426314]
19. C14orf80 C14orf80 1921 1.621 - - - - - - - 0.715 - 0.906
20. PMM2 ENSGALG00000007326 8260 1.615 - - - - - - 0.910 - - 0.705 phosphomannomutase 2 [Source:NCBI gene;Acc:427679]
21. GTF2E1 ENSGALG00000042320 7712 1.611 - - - - - - 0.845 - - 0.766 general transcription factor IIE subunit 1 [Source:HGNC Symbol;Acc:HGNC:4650]
22. STX2 ENSGALG00000002536 10438 1.608 - - - - - - 0.709 - - 0.899 syntaxin 2 [Source:NCBI gene;Acc:378895]
23. CLSPN ENSGALG00000002346 2590 1.606 - - - - - - - 0.720 - 0.886 claspin [Source:NCBI gene;Acc:428223]
24. GTF3C1 ENSGALG00000007387 5788 1.593 - - - - - - - 0.712 - 0.881 general transcription factor IIIC subunit 1 [Source:HGNC Symbol;Acc:HGNC:4664]
25. BZW2 ENSGALG00000010809 29213 1.569 - - - - - - - 0.760 - 0.809 basic leucine zipper and W2 domains 2 [Source:NCBI gene;Acc:420594]
26. PSMC2 ENSGALG00000008236 25980 1.567 - - - - - - 0.787 - - 0.780 proteasome 26S subunit, ATPase 2 [Source:NCBI gene;Acc:417716]
27. PSMB3 ENSGALG00000001597 22588 1.563 - - - - - - 0.790 0.773 - - proteasome subunit beta 3 [Source:HGNC Symbol;Acc:HGNC:9540]
28. C1H21ORF91 ENSGALG00000028290 5550 1.549 - - - - - - - 0.762 - 0.787 chromosome 1 open reading frame, human C21orf91 [Source:NCBI gene;Acc:395489]
29. TRRAP ENSGALG00000003596 6032 1.539 - - - - - - - 0.735 - 0.804 transformation/transcription domain associated protein [Source:HGNC Symbol;Acc:HGNC:12347]
30. CLTA ENSGALG00000015326 26867 1.538 - - - - - - 0.811 - - 0.727 clathrin light chain A [Source:NCBI gene;Acc:427284]
31. EIF5B ENSGALG00000016764 30681 1.536 0.725 - - - - - - 0.811 - - eukaryotic translation initiation factor 5B [Source:NCBI gene;Acc:395514]
32. ARG2 ENSGALG00000009519 19523 1.535 - - - - - - - 0.834 - 0.701 arginase 2 [Source:NCBI gene;Acc:423272]
33. GGA.8379 GGA.8379 4419 1.523 - - - - - - - 0.737 - 0.786
34. PWP1 ENSGALG00000012631 10536 1.505 - - - - - - - 0.717 - 0.788 PWP1 homolog, endonuclein [Source:NCBI gene;Acc:418066]
35. ZNF217 ZNF217 14511 1.49 - - - - - - - 0.715 - 0.775
36. HELLS ENSGALG00000005451 7094 1.461 - - - - - - - 0.714 - 0.747 helicase, lymphoid specific [Source:HGNC Symbol;Acc:HGNC:4861]
37. SDF2L1 ENSGALG00000031982 6084 1.444 - - - - - - - 0.730 - 0.714 stromal cell derived factor 2 like 1 [Source:HGNC Symbol;Acc:HGNC:10676]
38. PHF14 ENSGALG00000038041 13687 1.428 - - - - - - 0.720 0.708 - - PHD finger protein 14 [Source:NCBI gene;Acc:420583]
39. YBX1 ENSGALG00000004848 20992 0.972 - - - - - - 0.972 - - - Y-box binding protein 1 [Source:NCBI gene;Acc:386575]
40. MYST2 MYST2 8078 0.967 - - - - - - 0.967 - - -
41. EI24 ENSGALG00000038097 24081 0.963 - - - - - - 0.963 - - - EI24, autophagy associated transmembrane protein [Source:NCBI gene;Acc:419711]
42. EIF4G3 ENSGALG00000010084 5881 0.961 - - - - - - 0.961 - - - eukaryotic translation initiation factor 4 gamma 3 [Source:HGNC Symbol;Acc:HGNC:3298]
43. LEPROTL1 ENSGALG00000024482 4251 0.96 - - - - - - 0.960 - - - leptin receptor overlapping transcript-like 1
44. ARID4A ENSGALG00000012037 8554 0.96 - - - - - - 0.960 - - - AT-rich interaction domain 4A [Source:NCBI gene;Acc:423541]
45. SHQ1 ENSGALG00000007798 1982 0.959 - - - - - - 0.959 - - - SHQ1, H/ACA ribonucleoprotein assembly factor [Source:HGNC Symbol;Acc:HGNC:25543]
46. SEMA4B ENSGALG00000008297 11202 0.959 - - - - - - 0.959 - - - semaphorin 4B [Source:HGNC Symbol;Acc:HGNC:10730]
47. H2AFY_1 ENSGALG00000040141 4895 0.958 - - - - - - 0.958 - - - H2A histone family, member Y [Source:NCBI gene;Acc:395858]
48. DISP1 3281 0.958 - - - - - - 0.958 - - - dispatched RND transporter family member 1, transcript variant X3
49. PNO1 ENSGALG00000009093 11153 0.958 - - - - - - 0.958 - - - partner of NOB1 homolog [Source:NCBI gene;Acc:769547]
50. ENSGALG00000027854 ENSGALG00000027854 5007 0.957 - - - - - - 0.957 - - -
51. SCRN1 ENSGALG00000011176 3783 0.957 - - - - - - 0.957 - - - secernin 1 [Source:HGNC Symbol;Acc:HGNC:22192]
52. CLCN3 ENSGALG00000009674 3704 0.957 - - - - - - 0.957 - - - chloride voltage-gated channel 3 [Source:HGNC Symbol;Acc:HGNC:2021]
53. BPTF ENSGALG00000038222 7521 0.956 - - - - - - 0.956 - - - bromodomain PHD finger transcription factor [Source:HGNC Symbol;Acc:HGNC:3581]
54. ARNT2 ENSGALG00000006445 7050 0.956 - - - - - - 0.956 - - - aryl hydrocarbon receptor nuclear translocator 2 [Source:HGNC Symbol;Acc:HGNC:16876]
55. PPP3R1 ENSGALG00000023648 3417 0.955 - - - - - - 0.955 - - - protein phosphatase 3 regulatory subunit B, alpha [Source:NCBI gene;Acc:378804]
56. RBM12B ENSGALG00000035129 4314 0.955 - - - - - - 0.955 - - - RNA binding motif protein 12B [Source:NCBI gene;Acc:420223]
57. SDF4 ENSGALG00000001872 6382 0.955 - - - - - - 0.955 - - - stromal cell derived factor 4 [Source:NCBI gene;Acc:419423]
58. RRN3 ENSGALG00000041989 3934 0.954 - - - - - - 0.954 - - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
59. MRE11A MRE11A 5754 0.954 - - - - - - 0.954 - - -
60. TM9SF3 ENSGALG00000005534 15290 0.952 - - - - - - 0.952 - - - transmembrane 9 superfamily member 3
61. DNAJA3 ENSGALG00000007821 3963 0.951 - - - - - - 0.951 - - - DnaJ heat shock protein family (Hsp40) member A3 [Source:HGNC Symbol;Acc:HGNC:11808]
62. NCOA4 ENSGALG00000002066 10544 0.951 - - - - - - 0.951 - - - nuclear receptor coactivator 4 [Source:NCBI gene;Acc:423615]
63. ARHGAP29 ENSGALG00000005683 3622 0.951 - - - - - - 0.951 - - - Rho GTPase activating protein 29 [Source:NCBI gene;Acc:424488]
64. AP2B1 ENSGALG00000042125 13229 0.951 - - - - - - 0.951 - - - adaptor related protein complex 2 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:563]
65. AK6 ENSGALG00000020534 4791 0.951 - - - - - - 0.951 - - - adenylate kinase 6 [Source:NCBI gene;Acc:425215]
66. IRAK2 ENSGALG00000008407 5934 0.951 - - - - - - 0.951 - - - interleukin 1 receptor associated kinase 2 [Source:NCBI gene;Acc:416118]
67. RILPL2 ENSGALG00000003321 5632 0.951 - - - - - - 0.951 - - - Rab interacting lysosomal protein like 2 [Source:HGNC Symbol;Acc:HGNC:28787]
68. LATS2 4776 0.951 - - - - - - 0.951 - - - large tumor suppressor kinase 2
69. KCTD9 ENSGALG00000000275 3455 0.95 - - - - - - 0.950 - - - potassium channel tetramerization domain containing 9 [Source:NCBI gene;Acc:419526]
70. ATN1 ENSGALG00000014554 3270 0.949 - - - - - - 0.949 - - - atrophin 1 [Source:HGNC Symbol;Acc:HGNC:3033]
71. MOB2 ENSGALG00000030499 3658 0.948 - - - - - - 0.948 - - - MOB kinase activator 2 [Source:HGNC Symbol;Acc:HGNC:24904]
72. BFAR ENSGALG00000003111 1778 0.947 - - - - - - 0.947 - - - bifunctional apoptosis regulator [Source:HGNC Symbol;Acc:HGNC:17613]
73. POLR3E ENSGALG00000007008 4010 0.947 - - - - - - 0.947 - - - RNA polymerase III subunit E [Source:HGNC Symbol;Acc:HGNC:30347]
74. OGFOD1 6926 0.946 - - - - - - 0.946 - - - 2-oxoglutarate and iron dependent oxygenase domain containing 1
75. ZMYND11 ENSGALG00000006599 5740 0.946 - - - - - - 0.946 - - - zinc finger MYND-type containing 11 [Source:HGNC Symbol;Acc:HGNC:16966]
76. CAMKK2 ENSGALG00000040131 2795 0.946 - - - - - - 0.946 - - - calcium/calmodulin dependent protein kinase kinase 2, transcript variant X9
77. ABCD3 ENSGALG00000005647 4844 0.945 - - - - - - 0.945 - - - ATP binding cassette subfamily D member 3 [Source:NCBI gene;Acc:424487]
78. MAP1LC3A ENSGALG00000038721 2230 0.945 - - - - - - 0.945 - - - microtubule associated protein 1 light chain 3 alpha
79. E2F6 ENSGALG00000016454 4747 0.945 - - - - - - 0.945 - - - E2F transcription factor 6 [Source:NCBI gene;Acc:421943]
80. ENSGALG00000002923 ENSGALG00000002923 2233 0.945 - - - - - - 0.945 - - -
81. NDUFB8 ENSGALG00000005704 5781 0.944 - - - - - - 0.944 - - - NADH:ubiquinone oxidoreductase subunit B8 [Source:NCBI gene;Acc:423763]
82. GCC2 ENSGALG00000016806 1085 0.944 - - - - - - 0.944 - - - GRIP and coiled-coil domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23218]
83. LMNB2 ENSGALG00000000470 4364 0.943 - - - - - - 0.943 - - - lamin B2 [Source:NCBI gene;Acc:396222]
84. HACE1 ENSGALG00000015415 1194 0.943 - - - - - - 0.943 - - - HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:421788]
85. AKAP7 ENSGALG00000029794 3287 0.943 - - - - - - 0.943 - - - A-kinase anchoring protein 7 [Source:HGNC Symbol;Acc:HGNC:377]
86. MED6 ENSGALG00000029743 9414 0.941 - - - - - - 0.941 - - - mediator complex subunit 6 [Source:NCBI gene;Acc:426282]
87. TMEM130 ENSGALG00000003569 949 0.94 - - - - - - - - - 0.940 transmembrane protein 130 [Source:HGNC Symbol;Acc:HGNC:25429]
88. UBAC1 ENSGALG00000042564 598 0.939 - - - - - - 0.939 - - - UBA domain containing 1 [Source:NCBI gene;Acc:427754]
89. KLHL29 ENSGALG00000016495 582 0.938 - - - - - - 0.938 - - - kelch like family member 29 [Source:HGNC Symbol;Acc:HGNC:29404]
90. CETN2 ENSGALG00000007510 1688 0.938 - - - - - - 0.938 - - - centrin 2 [Source:NCBI gene;Acc:422303]
91. NPHP3 ENSGALG00000034586 1465 0.938 - - - - - - 0.938 - - - nephrocystin 3, transcript variant X1
92. gga-mir-6643 ENSGALG00000027935 4442 0.938 - - - - - - 0.938 - - - gga-mir-6643 [Source:miRBase;Acc:MI0022462]
93. POPDC3 ENSGALG00000027420 700 0.937 - - - - - - 0.937 - - - popeye domain containing 3 [Source:NCBI gene;Acc:395434]
94. MED7 ENSGALG00000003870 4244 0.937 - - - - - - 0.937 - - - mediator complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:2378]
95. TBCCD1 ENSGALG00000006566 2696 0.937 - - - - - - 0.937 - - - TBCC domain containing 1 [Source:NCBI gene;Acc:424869]
96. SREBF2 ENSGALG00000041687 4519 0.936 - - - - - - 0.936 - - - sterol regulatory element binding transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:11290]
97. SOD2 ENSGALG00000011661 13178 0.936 - - - - - - 0.936 - - - superoxide dismutase 2 [Source:NCBI gene;Acc:374042]
98. SLC1A1 ENSGALG00000010187 637 0.936 - - - - - - 0.936 - - - solute carrier family 1 member 1 [Source:HGNC Symbol;Acc:HGNC:10939]
99. ATE1 ENSGALG00000009502 3751 0.936 - - - - - - 0.936 - - - arginyltransferase 1 [Source:NCBI gene;Acc:423936]
100. GSTAL2 ENSGALG00000028551 4899 0.935 - - - - - - - - - 0.935 glutathione S-transferase alpha-like 2, transcript variant X4

There are 761 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA