Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CCNA1

Gene Name Gene ID Reads Annotation
CCNA1 ENSGALG00000017052 23 cyclin A1 [Source:HGNC Symbol;Acc:HGNC:1577]











Genes with expression patterns similar to CCNA1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CCNA1 ENSGALG00000017052 23 6 - - 1.000 1.000 1.000 1.000 1.000 1.000 - - cyclin A1 [Source:HGNC Symbol;Acc:HGNC:1577]
2. P2RY12 ENSGALG00000036470 20 1.874 - - - - - - 1.000 0.874 - - purinergic receptor P2Y12 [Source:HGNC Symbol;Acc:HGNC:18124]
3. GUCY1B3 29 1.731 - - - - - 0.778 - 0.953 - - guanylate cyclase 1 soluble subunit beta, transcript variant X2
4. ABLIM1 ENSGALG00000009048 19 1.561 - - 0.772 - - 0.789 - - - - actin binding LIM protein 1 [Source:NCBI gene;Acc:423911]
5. ZC2HC1A ENSGALG00000035932 17 1 - - - - - - 1.000 - - - zinc finger C2HC-type containing 1A [Source:HGNC Symbol;Acc:HGNC:24277]
6. GAL2 GAL2 32 1 - - - - - - 1.000 - - -
7. MMP23B ENSGALG00000001392 53 1 - - - - - - 1.000 - - - matrix metallopeptidase 23B [Source:HGNC Symbol;Acc:HGNC:7171]
8. PTPRS ENSGALG00000004048 70 1 - - - - - - 1.000 - - - protein tyrosine phosphatase, receptor type S [Source:NCBI gene;Acc:396375]
9. SUSD1 ENSGALG00000015677 12 1 - - - - - - 1.000 - - - sushi domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25413]
10. ENSGALG00000006213 ENSGALG00000006213 7 1 - - 1.000 - - - - - - -
11. ENSGALG00000023265 ENSGALG00000023265 4 1 - - - - - - 1.000 - - -
12. FOXN3 ENSGALG00000010665 18 1 - - - - - - 1.000 - - - forkhead box N3 [Source:HGNC Symbol;Acc:HGNC:1928]
13. C4A ENSGALG00000017040 5 1 - - - - - - 1.000 - - - complement C4A (Rodgers blood group), transcript variant X2
14. TRMT13 ENSGALG00000005290 95 1 - - - - - - 1.000 - - - tRNA methyltransferase 13 homolog [Source:HGNC Symbol;Acc:HGNC:25502]
15. ENSGALG00000002522 ENSGALG00000002522 21 1 - - - - - - 1.000 - - -
16. AREG ENSGALG00000010866 16 1 - - - - - - 1.000 - - - amphiregulin [Source:NCBI gene;Acc:428752]
17. PPIL3 ENSGALG00000008228 150 1 - - - - - - 1.000 - - - peptidylprolyl isomerase like 3 [Source:NCBI gene;Acc:424075]
18. CAD ENSGALG00000016524 94 1 - - - - - - 1.000 - - - carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase, transcript variant X2
19. CSF1R ENSGALG00000005725 5 1 - - - - - - 1.000 - - - Gallus gallus colony stimulating factor 1 receptor (CSF1R), mRNA. [Source:RefSeq mRNA;Acc:NM_001321517]
20. ZFYVE21 ENSGALG00000011534 7 1 - - - - - - 1.000 - - - zinc finger FYVE-type containing 21 [Source:NCBI gene;Acc:423486]
21. TPP1 52 1 - - - - - - 1.000 - - - tripeptidyl peptidase 1
22. CHRNA3 ENSGALG00000003014 6 1 - - - - - - 1.000 - - - cholinergic receptor nicotinic alpha 3 subunit [Source:NCBI gene;Acc:386578]
23. C1orf172 C1orf172 1 1 - - - - - - 1.000 - - -
24. ENSGALG00000020719 ENSGALG00000020719 25 1 - - - - - - 1.000 - - -
25. SPAG8 2 1 - - - - - - 1.000 - - - sperm associated antigen 8, transcript variant X3
26. ABCC8 ENSGALG00000006172 41 1 - - - - - - 1.000 - - - ATP binding cassette subfamily C member 8 [Source:HGNC Symbol;Acc:HGNC:59]
27. KMO ENSGALG00000007503 7 1 - - - - - - 1.000 - - - kynurenine 3-monooxygenase [Source:HGNC Symbol;Acc:HGNC:6381]
28. NEDD9 ENSGALG00000012747 30 1 - - - - - - 1.000 - - - neural precursor cell expressed, developmentally down-regulated 9 [Source:HGNC Symbol;Acc:HGNC:7733]
29. APOAIV APOAIV 5 1 - - - - - - 1.000 - - -
30. ENSGALG00000020781 ENSGALG00000020781 5 1 - - - - - - 1.000 - - -
31. CCDC96 9 1 - - - - - - 1.000 - - - coiled-coil domain containing 96
32. TMEM170B ENSGALG00000012744 24 1 - - - - - - 1.000 - - - transmembrane protein 170B [Source:HGNC Symbol;Acc:HGNC:34244]
33. GCNT7 ENSGALG00000007717 11 1 - - - - - - 1.000 - - - glucosaminyl (N-acetyl) transferase family member 7 [Source:HGNC Symbol;Acc:HGNC:16099]
34. MYCT1 ENSGALG00000013603 44 1 - - - - - - 1.000 - - - MYC target 1 [Source:HGNC Symbol;Acc:HGNC:23172]
35. KBTBD8 ENSGALG00000007569 20 1 - - - - - - 1.000 - - - kelch repeat and BTB domain containing 8 [Source:HGNC Symbol;Acc:HGNC:30691]
36. TMEM240 ENSGALG00000035387 14 1 - - - - - - 1.000 - - - transmembrane protein 240 [Source:HGNC Symbol;Acc:HGNC:25186]
37. ZHX3 ENSGALG00000039155 5 1 - - 1.000 - - - - - - - zinc fingers and homeoboxes 3 [Source:HGNC Symbol;Acc:HGNC:15935]
38. CEP350 ENSGALG00000003955 184 1 - - - - - - 1.000 - - - centrosomal protein 350 [Source:HGNC Symbol;Acc:HGNC:24238]
39. GOLPH3L ENSGALG00000014640 272 1 - - - - - - 1.000 - - - golgi phosphoprotein 3 like, transcript variant X2
40. TMEM132D ENSGALG00000002671 12 1 - - - - - - 1.000 - - - transmembrane protein 132D, transcript variant X6
41. MEGF9 3 1 - - - - - - 1.000 - - - multiple EGF-like-domains 9
42. KDSR ENSGALG00000012882 57 1 - - - - - - 1.000 - - - 3-ketodihydrosphingosine reductase [Source:NCBI gene;Acc:420902]
43. EFCAB4A EFCAB4A 12 1 - - - - - - 1.000 - - -
44. SCUBE3 ENSGALG00000002675 12 0.981 - - - - - - - 0.981 - - signal peptide, CUB domain and EGF like domain containing 3 [Source:HGNC Symbol;Acc:HGNC:13655]
45. BAI1 BAI1 235 0.981 - - - - - - - 0.981 - -
46. C12orf50 ENSGALG00000045093 9 0.971 - - - - - - - 0.971 - - chromosome 12 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:26665]
47. TUSC5 15 0.969 - - - - 0.969 - - - - - tumor suppressor candidate 5
48. PLSCR5 ENSGALG00000006807 9 0.969 - - - - 0.969 - - - - - phospholipid scramblase family member 5 [Source:HGNC Symbol;Acc:HGNC:19952]
49. GDF10 ENSGALG00000005985 11 0.969 - - - - 0.969 - - - - - growth differentiation factor 10 [Source:HGNC Symbol;Acc:HGNC:4215]
50. RMST RMST 2 0.969 - - - - 0.969 - - - - -
51. PQLC3 ENSGALG00000016449 39 0.969 - - - - 0.969 - - - - - PQ loop repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:28503]
52. MGAT4D ENSGALG00000009830 23 0.968 - - - - 0.968 - - - - - MGAT4 family member D [Source:HGNC Symbol;Acc:HGNC:43619]
53. SS2 ENSGALG00000003034 277 0.959 - - - - - - - 0.959 - - somatostatin II [Source:NCBI gene;Acc:395106]
54. NRG3 ENSGALG00000042812 10 0.954 - - - - - - - 0.954 - - neuregulin 3 [Source:HGNC Symbol;Acc:HGNC:7999]
55. PGF ENSGALG00000026557 33 0.954 - - - - - - - 0.954 - - placental growth factor [Source:HGNC Symbol;Acc:HGNC:8893]
56. FRMPD3 ENSGALG00000028975 3 0.954 - - - - - - - 0.954 - - FERM and PDZ domain containing 3 [Source:HGNC Symbol;Acc:HGNC:29382]
57. DENND2A ENSGALG00000012857 350 0.954 - - - - - - - 0.954 - - DENN domain containing 2A [Source:HGNC Symbol;Acc:HGNC:22212]
58. TTC29 ENSGALG00000010009 4 0.953 - - - - - - - 0.953 - - tetratricopeptide repeat domain 29 [Source:HGNC Symbol;Acc:HGNC:29936]
59. RUNX1 ENSGALG00000016022 2 0.953 - - - - - - - 0.953 - - runt-related transcription factor 1 [Source:NCBI gene;Acc:396152]
60. ENSGALG00000014888 ENSGALG00000014888 3 0.953 - - - - - - - 0.953 - -
61. ADPRH ENSGALG00000015473 7 0.953 - - - - - - - 0.953 - - ADP-ribosylarginine hydrolase [Source:NCBI gene;Acc:418452]
62. POMGNT1 ENSGALG00000010351 3 0.953 - - - - - - - 0.953 - - protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) [Source:HGNC Symbol;Acc:HGNC:19139]
63. PACRG ENSGALG00000011560 67 0.953 - - - - - - - 0.953 - - parkin coregulated [Source:HGNC Symbol;Acc:HGNC:19152]
64. ENSGALG00000027203 ENSGALG00000027203 2 0.953 - - - - - - - 0.953 - -
65. TSPAN10 ENSGALG00000004525 6 0.952 - - - - - - - 0.952 - - tetraspanin 10 [Source:HGNC Symbol;Acc:HGNC:29942]
66. BDKRB2 ENSGALG00000011080 12 0.949 - - - - - - - 0.949 - - bradykinin receptor B2 [Source:NCBI gene;Acc:428906]
67. C9orf96 C9orf96 43 0.946 - - - - - - - 0.946 - -
68. SERGEF ENSGALG00000006231 35 0.939 - - - - - - - 0.939 - - secretion regulating guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:17499]
69. EXOC6 ENSGALG00000006763 119 0.938 - - - - - - - 0.938 - - exocyst complex component 6 [Source:NCBI gene;Acc:423807]
70. WDR19 ENSGALG00000014064 49 0.935 - - - - - - - 0.935 - - WD repeat domain 19 [Source:HGNC Symbol;Acc:HGNC:18340]
71. PTCH2 ENSGALG00000010133 16 0.935 - - - - 0.935 - - - - - patched 2 [Source:HGNC Symbol;Acc:HGNC:9586]
72. MAPKAP1 ENSGALG00000000977 193 0.934 - - - - 0.934 - - - - - mitogen-activated protein kinase associated protein 1 [Source:NCBI gene;Acc:395627]
73. TOPAZ1 18 0.932 - - - - 0.932 - - - - - testis and ovary specific PAZ domain containing 1, transcript variant X6
74. PREX2 ENSGALG00000042354 134 0.931 - - - - 0.931 - - - - - phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2
75. ZFAT ENSGALG00000037698 34 0.93 - - - - 0.930 - - - - - zinc finger and AT-hook domain containing [Source:HGNC Symbol;Acc:HGNC:19899]
76. NRROS 72 0.928 - - - - - - - 0.928 - - negative regulator of reactive oxygen species, transcript variant X2
77. GPC6 ENSGALG00000016900 13 0.926 - - - - 0.926 - - - - - glypican 6 [Source:HGNC Symbol;Acc:HGNC:4454]
78. TTC25 ENSGALG00000003464 70 0.924 - - - - - - - 0.924 - - tetratricopeptide repeat domain 25
79. IGFBP2 ENSGALG00000011469 26 0.924 - - - - - - - 0.924 - - insulin like growth factor binding protein 2 [Source:NCBI gene;Acc:396315]
80. ENSGALG00000008594 ENSGALG00000008594 54 0.924 - - - - - - - 0.924 - -
81. UBAP1 ENSGALG00000021378 11 0.92 - - - - - - - 0.920 - - ubiquitin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:12461]
82. ZFYVE20 ZFYVE20 132 0.915 - - - - - - - 0.915 - -
83. GPR98 GPR98 22 0.913 - - - - 0.913 - - - - -
84. ENSGALG00000019793 ENSGALG00000019793 198 0.909 - - - - - - - 0.909 - -
85. PTPRR ENSGALG00000010148 93 0.904 - - - - - - - 0.904 - - protein tyrosine phosphatase, receptor type R, transcript variant X4
86. EPHX2 ENSGALG00000016567 399 0.896 - - - - 0.896 - - - - - epoxide hydrolase 2 [Source:NCBI gene;Acc:421999]
87. C2orf50 ENSGALG00000046449 17 0.894 - - - - - - 0.894 - - - chromosome 2 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:26324]
88. GPR149 ENSGALG00000010337 80 0.888 - - - - - 0.888 - - - - G protein-coupled receptor 149 [Source:NCBI gene;Acc:395382]
89. RNF208 ENSGALG00000008911 141 0.888 - - - - - - 0.888 - - - ring finger protein 208 [Source:HGNC Symbol;Acc:HGNC:25420]
90. GABRD ENSGALG00000001282 8 0.884 - - - - 0.884 - - - - - gamma-aminobutyric acid type A receptor delta subunit [Source:HGNC Symbol;Acc:HGNC:4084]
91. ENSGALG00000000193 ENSGALG00000000193 19 0.88 - - - - - - - 0.880 - -
92. TTBK2 ENSGALG00000009176 196 0.872 - - - - 0.872 - - - - - tau tubulin kinase 2 [Source:HGNC Symbol;Acc:HGNC:19141]
93. GRIA2 ENSGALG00000009405 275 0.871 - - - - - - - 0.871 - - glutamate ionotropic receptor AMPA type subunit 2 [Source:NCBI gene;Acc:414894]
94. WNT3A ENSGALG00000042657 22 0.865 - - - - 0.865 - - - - - Wnt family member 3A [Source:NCBI gene;Acc:395396]
95. ARFGEF1 ENSGALG00000034610 238 0.864 - - - - - 0.864 - - - - ADP ribosylation factor guanine nucleotide exchange factor 1 [Source:HGNC Symbol;Acc:HGNC:15772]
96. SAMD11 ENSGALG00000034453 43 0.863 - - - - 0.863 - - - - - sterile alpha motif domain containing 11 [Source:NCBI gene;Acc:419434]
97. NCKAP5 ENSGALG00000012177, ENSGALG00000045368 266 0.857 - - - - 0.857 - - - - - NCK associated protein 5, transcript variant X8
98. KIAA1377 KIAA1377 48 0.856 - - - - 0.856 - - - - -
99. SLC6A11 ENSGALG00000004879 16 0.854 - - - - 0.854 - - - - - solute carrier family 6 member 11 [Source:HGNC Symbol;Acc:HGNC:11044]
100. PCID2 ENSGALG00000016831 57 0.854 - - - - - 0.854 - - - - PCI domain containing 2 [Source:NCBI gene;Acc:418745]

There are 217 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA