Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for CCDC93

Gene Name Gene ID Reads Annotation
CCDC93 ENSGALG00000012129 2405 coiled-coil domain containing 93 [Source:NCBI gene;Acc:424277]











Genes with expression patterns similar to CCDC93

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CCDC93 ENSGALG00000012129 2405 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 coiled-coil domain containing 93 [Source:NCBI gene;Acc:424277]
2. RBM27 ENSGALG00000007516 3909 1.647 - - - - - - 0.737 0.910 - - RNA binding motif protein 27, transcript variant X3
3. FOPNL ENSGALG00000006532 2922 1.635 - - - - - - 0.716 0.919 - - FGFR1OP N-terminal like [Source:NCBI gene;Acc:416598]
4. CDCA2 ENSGALG00000045842 2236 1.63 - - - - - - - 0.919 0.711 - cell division cycle associated 2, transcript variant X3
5. ECI1 ENSGALG00000031563 11326 1.629 - - - - - - 0.725 0.904 - - enoyl-CoA delta isomerase 1 [Source:NCBI gene;Acc:416657]
6. GTF2E1 ENSGALG00000042320 7712 1.552 - - - - 0.710 - - 0.842 - - general transcription factor IIE subunit 1 [Source:HGNC Symbol;Acc:HGNC:4650]
7. CDC7 ENSGALG00000006051 3996 1.514 - - - - - - 0.788 - - 0.726 cell division cycle 7 [Source:HGNC Symbol;Acc:HGNC:1745]
8. SLC27A4 ENSGALG00000004965 3278 0.997 - - - - - - - 0.997 - - solute carrier family 27 member 4 [Source:HGNC Symbol;Acc:HGNC:10998]
9. THG1L ENSGALG00000003722 7497 0.983 - - - - - - - 0.983 - - tRNA-histidine guanylyltransferase 1 like [Source:NCBI gene;Acc:416242]
10. HERC2 ENSGALG00000016739 9900 0.956 - - - - - - - 0.956 - - HECT and RLD domain containing E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:418682]
11. MAMLD1 ENSGALG00000009098 1231 0.922 - - - - - - - 0.922 - - mastermind like domain containing 1 [Source:HGNC Symbol;Acc:HGNC:2568]
12. OGG1 ENSGALG00000006651 1320 0.921 - - - - - - - 0.921 - - 8-oxoguanine DNA glycosylase [Source:NCBI gene;Acc:771001]
13. RAD18 ENSGALG00000008368 7214 0.921 - - - - - - - 0.921 - - RAD18, E3 ubiquitin protein ligase [Source:NCBI gene;Acc:416114]
14. SORD ENSGALG00000031408 2119 0.921 - - - - - - - 0.921 - - sorbitol dehydrogenase [Source:NCBI gene;Acc:415332]
15. MYL2 ENSGALG00000004582 2245 0.921 - - - - - - - 0.921 - - myosin, light chain 2, regulatory, cardiac, slow [Source:NCBI gene;Acc:416874]
16. H1F0 ENSGALG00000044240 1206 0.921 - - - - - - - 0.921 - - H1 histone family, member 0 [Source:NCBI gene;Acc:693250]
17. GPR180 ENSGALG00000016897 1545 0.921 - - - - - - - 0.921 - - G protein-coupled receptor 180 [Source:HGNC Symbol;Acc:HGNC:28899]
18. RNF19A ENSGALG00000038772 380 0.921 - - - - - - - 0.921 - - ring finger protein 19A, RBR E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:13432]
19. CDC26 ENSGALG00000026095 3491 0.921 - - - - - - - 0.921 - - cell division cycle 26 [Source:NCBI gene;Acc:417269]
20. ENSGALG00000023314 ENSGALG00000023314 6331 0.92 - - - - - - - 0.920 - -
21. XPNPEP3 ENSGALG00000012003 2253 0.92 - - - - - - - 0.920 - - X-prolyl aminopeptidase 3 [Source:HGNC Symbol;Acc:HGNC:28052]
22. RNF2 ENSGALG00000037219 2299 0.92 - - - - - - - 0.920 - - ring finger protein 2 [Source:HGNC Symbol;Acc:HGNC:10061]
23. ARL6IP4 ENSGALG00000003682 2467 0.919 - - - - - - - 0.919 - - ADP ribosylation factor like GTPase 6 interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:18076]
24. UBE4A ENSGALG00000031134 5851 0.919 - - - - - - - 0.919 - - ubiquitination factor E4A [Source:NCBI gene;Acc:419758]
25. XRCC2 ENSGALG00000026865 2214 0.919 - - - - - - - 0.919 - - X-ray repair cross complementing 2 [Source:HGNC Symbol;Acc:HGNC:12829]
26. EDEM2 ENSGALG00000003128 3338 0.918 - - - - - - - 0.918 - - ER degradation enhancing alpha-mannosidase like protein 2 [Source:HGNC Symbol;Acc:HGNC:15877]
27. ROR1 ENSGALG00000011019 2155 0.918 - - - - - - - 0.918 - - receptor tyrosine kinase like orphan receptor 1 [Source:NCBI gene;Acc:395179]
28. MPP7 ENSGALG00000007408 2485 0.918 - - - - - - - 0.918 - - membrane palmitoylated protein 7 [Source:HGNC Symbol;Acc:HGNC:26542]
29. EMCN EMCN 2637 0.918 - - - - - - - 0.918 - -
30. RASSF2 ENSGALG00000030432 4822 0.917 - - - - - - - 0.917 - - Ras association domain family member 2 [Source:NCBI gene;Acc:419521]
31. NARG2 NARG2 2294 0.916 - - - - - - - 0.916 - -
32. ENSGALG00000027854 ENSGALG00000027854 5007 0.913 - - - - - - - 0.913 - -
33. TWISTNB ENSGALG00000010863 7563 0.912 - - - - - - - 0.912 - - TWIST neighbor [Source:NCBI gene;Acc:420603]
34. USP20 ENSGALG00000041104 3186 0.911 - - - - - - - 0.911 - - ubiquitin specific peptidase 20 [Source:HGNC Symbol;Acc:HGNC:12619]
35. CCDC12 ENSGALG00000005487 8190 0.911 - - - - - - - 0.911 - - coiled-coil domain containing 12 [Source:NCBI gene;Acc:420402]
36. TSPO2 ENSGALG00000003212 5141 0.911 - - - - - - - 0.911 - - translocator protein 2 [Source:HGNC Symbol;Acc:HGNC:21256]
37. ODF2 ENSGALG00000004767 3972 0.911 - - - - - - - 0.911 - - outer dense fiber of sperm tails 2 [Source:NCBI gene;Acc:417213]
38. ALDH4A1 ENSGALG00000042184 9432 0.906 - - - - - - - 0.906 - - aldehyde dehydrogenase 4 family member A1 [Source:NCBI gene;Acc:419467]
39. C1H12ORF23 C1H12ORF23 13234 0.902 - - - - - - - 0.902 - -
40. PHKG1 ENSGALG00000002485 15214 0.9 - - - - - - - 0.900 - - phosphorylase kinase catalytic subunit gamma 1 [Source:NCBI gene;Acc:417543]
41. TRABD ENSGALG00000030705 6577 0.9 - - - - - - - 0.900 - - TraB domain containing [Source:NCBI gene;Acc:417746]
42. HSPA14 ENSGALG00000035201 7372 0.9 - - - - - - - 0.900 - - heat shock protein family A (Hsp70) member 14
43. CHERP ENSGALG00000003824 11489 0.896 - - - - - - - 0.896 - - calcium homeostasis endoplasmic reticulum protein [Source:NCBI gene;Acc:420144]
44. NDUFS4 ENSGALG00000028026 25876 0.896 - - - - - - - 0.896 - - NADH:ubiquinone oxidoreductase subunit S4 [Source:HGNC Symbol;Acc:HGNC:7711]
45. KCTD2 ENSGALG00000007934 15085 0.892 - - - - - - - 0.892 - - potassium channel tetramerization domain containing 2 [Source:NCBI gene;Acc:422116]
46. CZH9ORF100 CZH9ORF100 4268 0.891 - - - - - - - 0.891 - -
47. WDR53 ENSGALG00000006395 4938 0.89 - - - - - - - 0.890 - - WD repeat domain 53 [Source:HGNC Symbol;Acc:HGNC:28786]
48. PPIF ENSGALG00000004809 5586 0.889 - - - - - - - 0.889 - - peptidylprolyl isomerase F [Source:NCBI gene;Acc:423723]
49. ARIH2 ENSGALG00000006956 3692 0.888 - - - - - - 0.888 - - - ariadne RBR E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:416061]
50. MTFR1 ENSGALG00000038385 9419 0.887 - - - - - - - 0.887 - - mitochondrial fission regulator 1 [Source:NCBI gene;Acc:395222]
51. GTF2B ENSGALG00000006205 6950 0.884 - - - - - - - 0.884 - - general transcription factor IIB [Source:HGNC Symbol;Acc:HGNC:4648]
52. C26H6ORF125 ENSGALG00000002881 15827 0.884 - - - - - - - 0.884 - - chromosome 26 open reading frame, human C6orf125 [Source:NCBI gene;Acc:419909]
53. SNF8 ENSGALG00000001309 7398 0.882 - - - - - - - 0.882 - - SNF8, ESCRT-II complex subunit [Source:HGNC Symbol;Acc:HGNC:17028]
54. SEC22B ENSGALG00000039704 16080 0.88 - - - - - - - 0.880 - - SEC22 homolog B, vesicle trafficking protein [Source:NCBI gene;Acc:424377]
55. HSF2BP ENSGALG00000016202 1696 0.88 - - - - - - - 0.880 - - heat shock transcription factor 2 binding protein [Source:HGNC Symbol;Acc:HGNC:5226]
56. SOD2 ENSGALG00000011661 13178 0.867 - - - - - - - 0.867 - - superoxide dismutase 2 [Source:NCBI gene;Acc:374042]
57. NIPSNAP3L ENSGALG00000027334 7514 0.866 - - - - - - - 0.866 - - nipsnap homolog 3-like
58. LPAR4 ENSGALG00000004121 2543 0.859 - - - - - - 0.859 - - - lysophosphatidic acid receptor 4 [Source:NCBI gene;Acc:422149]
59. SAR1A ENSGALG00000004431 28833 0.856 - - - - - - - 0.856 - - secretion associated Ras related GTPase 1A [Source:HGNC Symbol;Acc:HGNC:10534]
60. ANXA11 ENSGALG00000043826 5189 0.855 - - - - - - - 0.855 - - annexin A11 [Source:NCBI gene;Acc:423637]
61. TMEM183A ENSGALG00000000223 6915 0.853 - - - - - - - 0.853 - - transmembrane protein 183A [Source:NCBI gene;Acc:421156]
62. WDR43 ENSGALG00000032529 12235 0.848 - - - - - - - 0.848 - - WD repeat domain 43 [Source:NCBI gene;Acc:421295]
63. SLMO1 SLMO1 4357 0.845 - - - - - - 0.845 - - -
64. RAB2A ENSGALG00000015450 990 0.838 - - - - - - - 0.838 - - RAB2A, member RAS oncogene family [Source:NCBI gene;Acc:396153]
65. ST6GALNAC4 ENSGALG00000005063 1056 0.835 - - - - 0.835 - - - - - ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 [Source:NCBI gene;Acc:395182]
66. MLYCD ENSGALG00000005494 1882 0.834 - - - - - - - 0.834 - - malonyl-CoA decarboxylase [Source:HGNC Symbol;Acc:HGNC:7150]
67. GPR27 ENSGALG00000027091 8111 0.833 - - - - - - 0.833 - - - G protein-coupled receptor 27
68. C4H4ORF29 C4H4ORF29 2442 0.832 - - - - - - 0.832 - - -
69. STX7 ENSGALG00000034374 4695 0.83 - - - - - - - 0.830 - - syntaxin 7 [Source:NCBI gene;Acc:426930]
70. PLOD2 ENSGALG00000006783 22789 0.829 - - - - - - - 0.829 - - procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 [Source:HGNC Symbol;Acc:HGNC:9082]
71. EIF2B3 ENSGALG00000010140 7992 0.828 - - - - - - - 0.828 - - eukaryotic translation initiation factor 2B subunit gamma [Source:NCBI gene;Acc:424587]
72. FRZB ENSGALG00000002763 14833 0.826 - - - - - - - 0.826 - - frizzled related protein [Source:NCBI gene;Acc:395545]
73. EIF3J ENSGALG00000008187 43570 0.814 - - - - - - - 0.814 - - eukaryotic translation initiation factor 3 subunit J [Source:NCBI gene;Acc:415573]
74. SCYL2 ENSGALG00000011569 920 0.813 - - - - 0.813 - - - - - SCY1 like pseudokinase 2 [Source:NCBI gene;Acc:417930]
75. BEND3 ENSGALG00000015314 2162 0.812 - - - - - - 0.812 - - - BEN domain containing 3 [Source:HGNC Symbol;Acc:HGNC:23040]
76. DSL1 DSL1 113 0.809 - - - - 0.809 - - - - -
77. CIRH1A CIRH1A 6975 0.809 - - - - - - - 0.809 - -
78. N6AMT1 ENSGALG00000015802 5221 0.809 - - - - - - 0.809 - - - N-6 adenine-specific DNA methyltransferase 1 (putative) [Source:NCBI gene;Acc:418481]
79. ASNSD1 ENSGALG00000041666 3757 0.809 - - - - - - 0.809 - - - asparagine synthetase domain containing 1 [Source:NCBI gene;Acc:423983]
80. MCPH1 ENSGALG00000016332 2097 0.808 - - - - - - 0.808 - - - microcephalin 1 [Source:NCBI gene;Acc:100125976]
81. PERP PERP 734 0.807 - - - - - - 0.807 - - -
82. NUP62 ENSGALG00000004856 5799 0.805 - - - - - - - 0.805 - - nucleoporin 62
83. STC2 ENSGALG00000002893 2119 0.805 - - - - - - 0.805 - - - stanniocalcin 2 [Source:HGNC Symbol;Acc:HGNC:11374]
84. TRANK1 ENSGALG00000037629 2268 0.802 - - - - - - 0.802 - - - tetratricopeptide repeat and ankyrin repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:29011]
85. IARS ENSGALG00000004813 12936 0.801 - - - - - - 0.801 - - - isoleucyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:5330]
86. CHMP3 ENSGALG00000015805 11581 0.8 - - - - - - 0.800 - - - charged multivesicular body protein 3
87. C18orf21 ENSGALG00000013131 2816 0.799 - - - - - - 0.799 - - - chromosome 18 open reading frame 21 [Source:HGNC Symbol;Acc:HGNC:28802]
88. EMC8 ENSGALG00000005744 9422 0.799 - - - - - - 0.799 - - - ER membrane protein complex subunit 8
89. DBI ENSGALG00000012112 6910 0.798 - - - - - - 0.798 - - - diazepam binding inhibitor, acyl-CoA binding protein [Source:NCBI gene;Acc:395263]
90. ARPP19 ENSGALG00000017370 1720 0.796 - - - - - - 0.796 - - - cAMP regulated phosphoprotein 19 [Source:NCBI gene;Acc:768853]
91. LRRC6 ENSGALG00000042548 227 0.795 - - - - 0.795 - - - - - leucine rich repeat containing 6 [Source:NCBI gene;Acc:420324]
92. EMP2 ENSGALG00000027058 3925 0.794 - - - - - - 0.794 - - - epithelial membrane protein 2 [Source:HGNC Symbol;Acc:HGNC:3334]
93. ANAPC7 ENSGALG00000003826 5484 0.793 - - - - - - 0.793 - - - anaphase promoting complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:17380]
94. ACOX1 ENSGALG00000002159 2953 0.792 - - - - - - 0.792 - - - acyl-CoA oxidase 1 [Source:NCBI gene;Acc:417366]
95. C1orf50 ENSGALG00000004800 4894 0.791 - - - - 0.791 - - - - - chromosome 1 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:28795]
96. DUS2 856 0.791 - - - - 0.791 - - - - - dihydrouridine synthase 2, transcript variant X2
97. TEF ENSGALG00000011958 375 0.79 - - - - 0.790 - - - - - TEF, PAR bZIP transcription factor [Source:NCBI gene;Acc:396342]
98. TRIT1 ENSGALG00000003851 1518 0.789 - - - - - - 0.789 - - - tRNA isopentenyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:20286]
99. LSM6 ENSGALG00000009985 18582 0.789 - - - - - - 0.789 - - - LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:422466]
100. SCAF4 ENSGALG00000033965 2027 0.788 - - - - 0.788 - - - - - SR-related CTD associated factor 4 [Source:NCBI gene;Acc:418492]

There are 240 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA