Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CCDC88C

Gene Name Gene ID Reads Annotation
CCDC88C ENSGALG00000040156 6191 coiled-coil domain containing 88C [Source:HGNC Symbol;Acc:HGNC:19967]











Genes with expression patterns similar to CCDC88C

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CCDC88C ENSGALG00000040156 6191 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 coiled-coil domain containing 88C [Source:HGNC Symbol;Acc:HGNC:19967]
2. GABARAPL2 ENSGALG00000003208 9195 2.422 - - 0.759 - - - 0.788 0.875 - - GABA type A receptor associated protein like 2 [Source:HGNC Symbol;Acc:HGNC:13291]
3. SEC23A_1 ENSGALG00000010150 14745 1.7 - - - - - - 0.812 0.888 - - Sec23 homolog A, coat complex II component [Source:HGNC Symbol;Acc:HGNC:10701]
4. TBCD ENSGALG00000001503 7880 1.699 - - - - - - 0.703 0.996 - - tubulin folding cofactor D [Source:NCBI gene;Acc:417334]
5. TMED2 ENSGALG00000003307 20704 1.634 - - - - - - 0.738 0.896 - - transmembrane p24 trafficking protein 2 [Source:NCBI gene;Acc:416821]
6. NUDCD2 ENSGALG00000001726 6303 1.595 - - 0.765 - - - - 0.830 - - NudC domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30535]
7. UBE3A ENSGALG00000034944 5196 1.567 - - 0.837 - - - 0.730 - - - ubiquitin protein ligase E3A [Source:HGNC Symbol;Acc:HGNC:12496]
8. SPCS1 ENSGALG00000001655 7718 1.565 - - 0.837 - - - 0.728 - - - signal peptidase complex subunit 1 [Source:NCBI gene;Acc:415899]
9. BORA ENSGALG00000016931 3660 1.555 - - 0.844 - - - 0.711 - - - bora, aurora kinase A activator [Source:NCBI gene;Acc:769298]
10. UBE2B ENSGALG00000032664 6069 1.551 - - 0.799 - - - 0.752 - - - ubiquitin conjugating enzyme E2 B [Source:HGNC Symbol;Acc:HGNC:12473]
11. SMC4 ENSGALG00000009553 15715 1.527 - - 0.717 - - - 0.810 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
12. SENP6 ENSGALG00000015901 8013 1.511 - - 0.771 - - - 0.740 - - - SUMO specific peptidase 6 [Source:HGNC Symbol;Acc:HGNC:20944]
13. SPDL1 ENSGALG00000001942 4403 1.499 - - 0.734 - - - 0.765 - - - spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
14. TMEM167A ENSGALG00000027332 13862 1.496 - - 0.771 - - - 0.725 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
15. TMEM175 ENSGALG00000015368 3342 1.485 - - 0.725 - - - 0.760 - - - transmembrane protein 175 [Source:NCBI gene;Acc:427293]
16. JMJD1C ENSGALG00000002942 4556 1.477 - - - - - - 0.738 - 0.739 - jumonji domain containing 1C [Source:NCBI gene;Acc:423655]
17. NUPL1 NUPL1 8197 1.476 - - 0.702 - - - 0.774 - - -
18. MOCS2 ENSGALG00000014906 4974 1.465 - - - - - - 0.700 - 0.765 - molybdenum cofactor synthesis 2 [Source:HGNC Symbol;Acc:HGNC:7193]
19. CXXC5 ENSGALG00000000884 16351 1.464 - - 0.731 - - - 0.733 - - - CXXC finger protein 5 [Source:HGNC Symbol;Acc:HGNC:26943]
20. BAG5 ENSGALG00000031062 4498 1.458 - - 0.744 - - - 0.714 - - - BCL2 associated athanogene 5 [Source:NCBI gene;Acc:423482]
21. BMS1 ENSGALG00000002624 8339 1.451 - - 0.722 - - - 0.729 - - - BMS1, ribosome biogenesis factor [Source:NCBI gene;Acc:423633]
22. EIF2B EIF2B 28702 1.451 - - - - - 0.737 0.714 - - -
23. KIAA1609 KIAA1609 1749 1.406 - - - - - - 0.703 - 0.703 -
24. LZIC ENSGALG00000002616 9052 0.972 - - - - - - - 0.972 - - leucine zipper and CTNNBIP1 domain containing [Source:NCBI gene;Acc:419445]
25. TRAPPC8 ENSGALG00000015157 4308 0.893 - - - - - - - 0.893 - - trafficking protein particle complex 8, transcript variant X5
26. AAMP ENSGALG00000011445 2528 0.893 - - 0.893 - - - - - - - angio associated migratory cell protein [Source:NCBI gene;Acc:769880]
27. CHST10 ENSGALG00000016769 2472 0.892 - - - - - - - 0.892 - - carbohydrate sulfotransferase 10 [Source:NCBI gene;Acc:395206]
28. TCF15 ENSGALG00000026276 3646 0.892 - - - - - - - 0.892 - - transcription factor 15 [Source:NCBI gene;Acc:395788]
29. ECHDC1 ENSGALG00000014828 958 0.892 - - - - - - - 0.892 - - ethylmalonyl-CoA decarboxylase 1 [Source:NCBI gene;Acc:769021]
30. APCDD1 ENSGALG00000000894 1482 0.892 - - - - - - - 0.892 - - APC down-regulated 1 [Source:NCBI gene;Acc:426765]
31. HIAT1 HIAT1 447 0.892 - - - - - - - 0.892 - -
32. ENSGALG00000026592 ENSGALG00000026592 4331 0.892 - - - - - - - 0.892 - -
33. SNRNP25 ENSGALG00000026559 2097 0.891 - - - - - - - 0.891 - - small nuclear ribonucleoprotein U11/U12 subunit 25 [Source:HGNC Symbol;Acc:HGNC:14161]
34. ORAI2 ENSGALG00000001837 2528 0.891 - - - - - - - 0.891 - - ORAI calcium release-activated calcium modulator 2 [Source:NCBI gene;Acc:417509]
35. CSRNP1 ENSGALG00000027905 3141 0.891 - - - - - - - 0.891 - - cysteine and serine rich nuclear protein 1 [Source:HGNC Symbol;Acc:HGNC:14300]
36. SLC25A33 ENSGALG00000002519 4173 0.891 - - - - - - - 0.891 - - solute carrier family 25 member 33 [Source:HGNC Symbol;Acc:HGNC:29681]
37. MTFR1L ENSGALG00000000998 3457 0.89 - - - - - - - 0.890 - - mitochondrial fission regulator 1 like [Source:HGNC Symbol;Acc:HGNC:28836]
38. CMIP ENSGALG00000038494 5016 0.89 - - - - - - - 0.890 - - c-Maf inducing protein [Source:HGNC Symbol;Acc:HGNC:24319]
39. CHMP7 ENSGALG00000000409 8967 0.888 - - - - - - - 0.888 - - charged multivesicular body protein 7 [Source:NCBI gene;Acc:419535]
40. GSTK1 ENSGALG00000014708 4687 0.888 - - - - - - - 0.888 - - glutathione S-transferase kappa 1 [Source:NCBI gene;Acc:418302]
41. DPP9 ENSGALG00000004200 4515 0.887 - - - - - - - 0.887 - - dipeptidyl peptidase 9 [Source:HGNC Symbol;Acc:HGNC:18648]
42. CCDC101 CCDC101 9111 0.885 - - - - - - - 0.885 - -
43. WDR70 ENSGALG00000003708 5835 0.883 - - - - - - - 0.883 - - WD repeat domain 70 [Source:NCBI gene;Acc:427444]
44. DR1 ENSGALG00000005858 8016 0.883 - - - - - - - 0.883 - - down-regulator of transcription 1 [Source:NCBI gene;Acc:424496]
45. DCN ENSGALG00000011274 4166 0.883 - - - - - - - 0.883 - - decorin [Source:NCBI gene;Acc:417892]
46. USPL1 ENSGALG00000017079 6263 0.882 - - - - - - - 0.882 - - ubiquitin specific peptidase like 1 [Source:NCBI gene;Acc:395436]
47. PDAP1 ENSGALG00000036552 28881 0.88 - - - - - - - 0.880 - - PDGFA associated protein 1 [Source:HGNC Symbol;Acc:HGNC:14634]
48. RWDD1 ENSGALG00000014953 9986 0.88 - - - - - - - 0.880 - - RWD domain containing 1 [Source:NCBI gene;Acc:421741]
49. NDUFA7 ENSGALG00000000629 14046 0.879 - - - - - - - 0.879 - - NADH:ubiquinone oxidoreductase subunit A7
50. TMEM128 ENSGALG00000014992 6567 0.879 - - - - - - - 0.879 - - transmembrane protein 128 [Source:NCBI gene;Acc:422845]
51. PMM2 ENSGALG00000007326 8260 0.872 - - - - - - - 0.872 - - phosphomannomutase 2 [Source:NCBI gene;Acc:427679]
52. CGNL1 ENSGALG00000004294 1177 0.87 - - 0.870 - - - - - - - cingulin like 1 [Source:HGNC Symbol;Acc:HGNC:25931]
53. NCKAP1 ENSGALG00000002750 22749 0.867 - - - - - - - 0.867 - - NCK associated protein 1 [Source:HGNC Symbol;Acc:HGNC:7666]
54. CASP8AP2 ENSGALG00000015611 5657 0.867 - - - - - - - 0.867 - - caspase 8 associated protein 2 [Source:HGNC Symbol;Acc:HGNC:1510]
55. LMNB2 ENSGALG00000000470 4364 0.866 - - 0.866 - - - - - - - lamin B2 [Source:NCBI gene;Acc:396222]
56. KIF2C ENSGALG00000010120 8999 0.866 - - - - - - 0.866 - - - kinesin family member 2C, transcript variant X1
57. TRAF3IP1 ENSGALG00000004236 7094 0.863 - - 0.863 - - - - - - - TRAF3 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:17861]
58. PSMA6 ENSGALG00000010060 26517 0.856 - - - - - - - 0.856 - - proteasome subunit alpha 6 [Source:NCBI gene;Acc:423326]
59. CANX ENSGALG00000032148 11297 0.854 - - - - - - - 0.854 - - calnexin [Source:NCBI gene;Acc:416288]
60. MTMR8 ENSGALG00000007590 6022 0.853 - - - - - - 0.853 - - - myotubularin related protein 8 [Source:NCBI gene;Acc:422312]
61. PCYT1B 190 0.853 - - 0.853 - - - - - - - phosphate cytidylyltransferase 1, choline, beta, transcript variant X4
62. RBBP8 ENSGALG00000014982 3255 0.851 - - 0.851 - - - - - - - RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]
63. SCP2 ENSGALG00000010652 19563 0.85 - - - - - - - 0.850 - - sterol carrier protein 2 [Source:NCBI gene;Acc:396550]
64. RFC4 ENSGALG00000008703 5842 0.848 - - 0.848 - - - - - - - replication factor C subunit 4 [Source:NCBI gene;Acc:424958]
65. KIF23 ENSGALG00000008095 9919 0.847 - - - - - - - 0.847 - - kinesin family member 23 [Source:NCBI gene;Acc:415567]
66. TOP2A ENSGALG00000003922 7726 0.847 - - 0.847 - - - - - - - topoisomerase (DNA) II alpha [Source:NCBI gene;Acc:395570]
67. HDGFL2 ENSGALG00000027068 1300 0.847 - - 0.847 - - - - - - - HDGF like 2 [Source:NCBI gene;Acc:772302]
68. RALGDS ENSGALG00000003412 4478 0.846 - - 0.846 - - - - - - - ral guanine nucleotide dissociation stimulator, transcript variant X10
69. TTC37 ENSGALG00000014670 5715 0.845 - - - - - - 0.845 - - - tetratricopeptide repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:23639]
70. CMTM8 ENSGALG00000011484 2826 0.844 - - 0.844 - - - - - - - CKLF like MARVEL transmembrane domain containing 8 [Source:NCBI gene;Acc:420665]
71. ZDHHC7 ENSGALG00000042522 1774 0.843 - - 0.843 - - - - - - - zinc finger DHHC-type containing 7 [Source:HGNC Symbol;Acc:HGNC:18459]
72. SLC41A1 ENSGALG00000000721 1604 0.843 - - 0.843 - - - - - - - solute carrier family 41 member 1 [Source:HGNC Symbol;Acc:HGNC:19429]
73. TIAR TIAR 2471 0.842 - - 0.842 - - - - - - -
74. TUBA4A ENSGALG00000000433 1367 0.841 - - 0.841 - - - - - - - tubulin alpha 4a
75. GCC2 ENSGALG00000016806 1085 0.839 - - 0.839 - - - - - - - GRIP and coiled-coil domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23218]
76. SNN ENSGALG00000028876 1687 0.839 - - 0.839 - - - - - - - stannin [Source:NCBI gene;Acc:416429]
77. CALSYNTENIN-1 CALSYNTENIN-1 11195 0.838 - - 0.838 - - - - - - -
78. ISCA1 ENSGALG00000012606 10342 0.838 - - 0.838 - - - - - - - iron-sulfur cluster assembly 1 [Source:NCBI gene;Acc:427463]
79. SEC22B ENSGALG00000039704 16080 0.838 - - 0.838 - - - - - - - SEC22 homolog B, vesicle trafficking protein [Source:NCBI gene;Acc:424377]
80. LBR 6686 0.836 - - 0.836 - - - - - - - lamin B receptor, transcript variant X4
81. GFER ENSGALG00000005579 1367 0.836 - - 0.836 - - - - - - - growth factor, augmenter of liver regeneration [Source:HGNC Symbol;Acc:HGNC:4236]
82. FUCA1 ENSGALG00000004112 2154 0.836 - - - - - - - - 0.836 - alpha-L-fucosidase 1 [Source:HGNC Symbol;Acc:HGNC:4006]
83. ZNF639 ENSGALG00000005944 6387 0.836 - - 0.836 - - - - - - - zinc finger protein 639 [Source:NCBI gene;Acc:425280]
84. SALL4 ENSGALG00000041365 6760 0.835 - - - - - - 0.835 - - - spalt like transcription factor 4 [Source:NCBI gene;Acc:769286]
85. PDIA5 ENSGALG00000011689 6913 0.834 - - 0.834 - - - - - - - protein disulfide isomerase family A member 5 [Source:HGNC Symbol;Acc:HGNC:24811]
86. TYW3 ENSGALG00000032549 4869 0.832 - - 0.832 - - - - - - - tRNA-yW synthesizing protein 3 homolog [Source:NCBI gene;Acc:424720]
87. TRUB1 ENSGALG00000009091 1005 0.831 - - 0.831 - - - - - - - TruB pseudouridine synthase family member 1 [Source:HGNC Symbol;Acc:HGNC:16060]
88. ZNF451 ENSGALG00000016282 3380 0.831 - - 0.831 - - - - - - - zinc finger protein 451 [Source:HGNC Symbol;Acc:HGNC:21091]
89. CENPO ENSGALG00000016609 1699 0.831 - - 0.831 - - - - - - - centromere protein O [Source:NCBI gene;Acc:422014]
90. GALNT1 ENSGALG00000013135 13583 0.831 - - - - - - 0.831 - - - polypeptide N-acetylgalactosaminyltransferase 1 [Source:NCBI gene;Acc:420955]
91. ATP10D ENSGALG00000014192 94 0.829 - - 0.829 - - - - - - - ATPase phospholipid transporting 10D (putative) [Source:HGNC Symbol;Acc:HGNC:13549]
92. AKTIP ENSGALG00000033378 1991 0.828 - - 0.828 - - - - - - - AKT interacting protein [Source:NCBI gene;Acc:415720]
93. ST14 ENSGALG00000001331 1655 0.828 - - 0.828 - - - - - - - suppression of tumorigenicity 14 [Source:HGNC Symbol;Acc:HGNC:11344]
94. CDCA7L ENSGALG00000035978 2112 0.827 - - 0.827 - - - - - - - cell division cycle associated 7 like [Source:NCBI gene;Acc:420608]
95. GSTAL2 ENSGALG00000028551 4899 0.827 - - - - - - - 0.827 - - glutathione S-transferase alpha-like 2, transcript variant X4
96. RRP1B ENSGALG00000035696 12309 0.827 - - - - - - 0.827 - - - ribosomal RNA processing 1B [Source:NCBI gene;Acc:425237]
97. C18orf8 C18orf8 1512 0.826 - - 0.826 - - - - - - -
98. CHALK5 CHALK5 1351 0.826 - - 0.826 - - - - - - -
99. G3BP1 ENSGALG00000004160 36795 0.826 - - - - - - - 0.826 - - G3BP stress granule assembly factor 1 [Source:NCBI gene;Acc:416265]
100. GTF2E1 ENSGALG00000042320 7712 0.825 - - 0.825 - - - - - - - general transcription factor IIE subunit 1 [Source:HGNC Symbol;Acc:HGNC:4650]

There are 639 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA