Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CCDC88A

Gene Name Gene ID Reads Annotation
CCDC88A CCDC88A 90










Genes with expression patterns similar to CCDC88A

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. CCDC88A CCDC88A 90 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. fbn1 39 1.797 - 0.913 - - - 0.884 - - - fibrillin 1
3. mmp23bb ENSDARG00000009825 133 1.635 - - - - - 0.809 0.826 - - matrix metallopeptidase 23bb [Source:ZFIN;Acc:ZDB-GENE-050417-448]
4. EGR4_1 EGR4_1 14 1.618 - - - - - 0.884 0.734 - -
5. CAMSAP2 CAMSAP2 109 1.618 - - - - - 0.884 0.734 - -
6. ei24 ENSDARG00000053840 78 1.618 - - - - - 0.884 0.734 - - etoposide induced 2.4 [Source:ZFIN;Acc:ZDB-GENE-050417-457]
7. zgc:110434 21 1.618 - - - - - 0.884 0.734 - - zgc:110434
8. si:ch73-191k20.4 37 1.612 0.728 - - - - 0.884 - - - si:ch73-191k20.4, transcript variant X1
9. PEG3_38 PEG3_38 521 1.575 0.767 0.808 - - - - - - -
10. ctgfa ENSDARG00000042934, ENSDARG00000112741 2123 1.543 - - - - - 0.831 0.712 - - connective tissue growth factor a [Source:ZFIN;Acc:ZDB-GENE-030131-102]
11. rap2ab ENSDARG00000040246 63 1.528 - 0.794 - - - - 0.734 - - RAP2A, member of RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-090312-116]
12. CABZ01077140.1 CABZ01077140.1 2 1.48 - - - - - 0.746 0.734 - -
13. si:dkey-167i21.2 ENSDARG00000093886 10 1.476 - - - - 0.742 - 0.734 - - si:dkey-167i21.2 [Source:ZFIN;Acc:ZDB-GENE-090313-198]
14. loxl5b ENSDARG00000076904 468 1.45 - - - - - 0.708 0.742 - - lysyl oxidase-like 5b [Source:ZFIN;Acc:ZDB-GENE-070818-3]
15. tfpi2 ENSDARG00000061351, ENSDARG00000115583 61 1.434 - 0.702 - - - 0.732 - - - tissue factor pathway inhibitor 2 [Source:ZFIN;Acc:ZDB-GENE-060503-38]
16. cdkn2d ENSDARG00000094176 190 0.94 - 0.940 - - - - - - - cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4) [Source:ZFIN;Acc:ZDB-GENE-110316-1]
17. TMEM100_1 TMEM100_1 44 0.933 - - - - - 0.933 - - -
18. azi1 azi1 507 0.933 - 0.933 - - - - - - -
19. dopey1 438 0.932 - 0.932 - - - - - - - dopey family member 1, transcript variant X4
20. fscn2b ENSDARG00000074396 177 0.924 - - - - - - 0.924 - - fascin actin-bundling protein 2b, retinal [Source:ZFIN;Acc:ZDB-GENE-040426-1740]
21. NEFH NEFH 101 0.921 - - - - 0.921 - - - -
22. FP017295.1 ENSDARG00000091185 22 0.917 - 0.917 - - - - - - -
23. BEND2_1 BEND2_1 45 0.917 - 0.917 - - - - - - -
24. fasn ENSDARG00000087657 99 0.916 - - - - 0.916 - - - - fatty acid synthase [Source:ZFIN;Acc:ZDB-GENE-030131-7802]
25. iqca1 ENSDARG00000057276, ENSDARG00000113642 161 0.915 - 0.915 - - - - - - - IQ motif containing with AAA domain 1 [Source:ZFIN;Acc:ZDB-GENE-050208-768]
26. UNC13A UNC13A 36 0.904 - - - - - 0.904 - - -
27. rnmtl1a 112 0.9 - 0.900 - - - - - - - RNA methyltransferase like 1a
28. clu ENSDARG00000010434 498 0.9 - - - - - 0.900 - - - clusterin [Source:ZFIN;Acc:ZDB-GENE-040426-1774]
29. NTRK3 NTRK3 163 0.895 - - - - - 0.895 - - -
30. ntn1b ENSDARG00000022531 248 0.894 - - - - - 0.894 - - - netrin 1b [Source:ZFIN;Acc:ZDB-GENE-990415-168]
31. proza ENSDARG00000037783, ENSDARG00000116864 500 0.89 - 0.890 - - - - - - - protein Z, vitamin K-dependent plasma glycoprotein a [Source:ZFIN;Acc:ZDB-GENE-061013-403]
32. shhb ENSDARG00000038867 338 0.89 - - - - - 0.890 - - - sonic hedgehog b [Source:ZFIN;Acc:ZDB-GENE-980526-41]
33. C9HXorf36 C9HXorf36 44 0.89 - - - - - 0.890 - - -
34. porcnl ENSDARG00000052455 29 0.888 - 0.888 - - - - - - - porcupine O-acyltransferase like [Source:ZFIN;Acc:ZDB-GENE-030131-5931]
35. si:dkey-250k15.4 ENSDARG00000092169 19 0.884 - - - - - 0.884 - - - si:dkey-250k15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-254]
36. si:ch211-132b12.2 ENSDARG00000094946 15 0.884 - - - - - 0.884 - - - si:ch211-132b12.2 [Source:ZFIN;Acc:ZDB-GENE-050420-178]
37. ifnlr1 ENSDARG00000087131 73 0.884 - - - - - 0.884 - - - interferon lambda receptor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-5]
38. ptpn20 ENSDARG00000075459 1 0.884 - - - - - 0.884 - - - protein tyrosine phosphatase, non-receptor type 20 [Source:ZFIN;Acc:ZDB-GENE-090313-90]
39. ngb ENSDARG00000053475, ENSDARG00000116651 33 0.884 - - - - - 0.884 - - - neuroglobin [Source:ZFIN;Acc:ZDB-GENE-011102-1]
40. si:dkey-14d8.1 ENSDARG00000095332 11 0.884 - - - - - 0.884 - - - si:dkey-14d8.1 [Source:ZFIN;Acc:ZDB-GENE-041210-86]
41. ENDOD1_4 ENDOD1_4 2 0.884 - - - - - 0.884 - - -
42. CABZ01078520.1 CABZ01078520.1 2 0.884 - - - - - 0.884 - - -
43. abcc5 ENSDARG00000061233 60 0.884 - - - - - 0.884 - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 5 [Source:ZFIN;Acc:ZDB-GENE-050517-17]
44. si:ch211-207o17.8 si:ch211-207o17.8 1 0.884 - - - - - 0.884 - - -
45. CR318660.3 CR318660.3 0 0.884 - - - - - 0.884 - - -
46. arhgef19 ENSDARG00000078853 17 0.884 - - - - - 0.884 - - - Rho guanine nucleotide exchange factor (GEF) 19 [Source:ZFIN;Acc:ZDB-GENE-090313-243]
47. RIC3 ENSDARG00000105549 3 0.884 - - - - - 0.884 - - - RIC3 acetylcholine receptor chaperone [Source:HGNC Symbol;Acc:HGNC:30338]
48. NPM2 NPM2 41 0.884 - - - - - 0.884 - - -
49. tor2a ENSDARG00000100559, ENSDARG00000115324 58 0.884 - - - - - 0.884 - - - torsin family 2, member A [Source:ZFIN;Acc:ZDB-GENE-050913-60]
50. pi15b ENSDARG00000061292 1 0.884 - - - - - 0.884 - - - peptidase inhibitor 15b [Source:ZFIN;Acc:ZDB-GENE-070912-590]
51. fbxo36a ENSDARG00000010662, ENSDARG00000109843 13 0.884 - - - - - 0.884 - - - F-box protein 36a [Source:ZFIN;Acc:ZDB-GENE-060929-986]
52. si:dkey-43b14.6 si:dkey-43b14.6 20 0.884 - - - - - 0.884 - - -
53. si:ch211-198c19.1 ENSDARG00000089333 3 0.884 - - - - - 0.884 - - - si:ch211-198c19.1 [Source:ZFIN;Acc:ZDB-GENE-100922-218]
54. si:ch211-173n18.3 ENSDARG00000028478 8 0.884 - - - - - 0.884 - - - si:ch211-173n18.3 [Source:ZFIN;Acc:ZDB-GENE-120215-62]
55. si:dkey-117n7.4 ENSDARG00000092064 22 0.884 - - - - - 0.884 - - - si:dkey-117n7.4 [Source:ZFIN;Acc:ZDB-GENE-060503-237]
56. carm1l ENSDARG00000091531 13 0.884 - - - - - 0.884 - - - coactivator-associated arginine methyltransferase 1, like [Source:ZFIN;Acc:ZDB-GENE-090312-219]
57. hel_dr4 hel_dr4 12 0.884 - - - - - 0.884 - - -
58. si:dkey-40j3.3 ENSDARG00000103597 5 0.884 - - - - - 0.884 - - - si:dkey-40j3.3 [Source:ZFIN;Acc:ZDB-GENE-110913-109]
59. si:ch211-223g7.7 si:ch211-223g7.7 1 0.884 - - - - - 0.884 - - -
60. ZNF337 ZNF337 3 0.884 - - - - - 0.884 - - -
61. si:ch73-111e15.1 ENSDARG00000008182 2 0.884 - - - - - 0.884 - - - si:ch73-111e15.1 [Source:ZFIN;Acc:ZDB-GENE-110411-28]
62. napgl napgl 39 0.884 - - - - - 0.884 - - -
63. si:ch211-122l14.7 ENSDARG00000095576 5 0.884 - - - - - 0.884 - - - si:ch211-122l14.7 [Source:ZFIN;Acc:ZDB-GENE-041014-263]
64. elavl2 ENSDARG00000040732 44 0.884 - - - - - 0.884 - - - ELAV like neuron-specific RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040704-9]
65. KCNJ12 KCNJ12 17 0.884 - - - - - 0.884 - - -
66. veph veph 3 0.884 - - - - - 0.884 - - -
67. zeb1a ENSDARG00000016788 48 0.884 - - - - - 0.884 - - - zinc finger E-box binding homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-070912-124]
68. zgc:195633_1 142 0.884 - - - - - 0.884 - - - zgc:195633
69. hp ENSDARG00000051890, ENSDARG00000095807 4 0.884 - - - - - 0.884 - - - haptoglobin [Source:ZFIN;Acc:ZDB-GENE-030131-1259]
70. U1_54 U1_54 0 0.884 - - - - - 0.884 - - -
71. dmrt2b ENSDARG00000070013, ENSDARG00000114365, ENSDARG00000114967 57 0.884 - - - - - 0.884 - - - doublesex and mab-3 related transcription factor 2b [Source:ZFIN;Acc:ZDB-GENE-080813-1]
72. or125-4 ENSDARG00000095417 2 0.884 - - - - - 0.884 - - - odorant receptor, family E, subfamily 125, member 4 [Source:ZFIN;Acc:ZDB-GENE-070806-94]
73. SNTB2 ENSDARG00000051763 2 0.884 - - - - - 0.884 - - - syntrophin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-131121-511]
74. wu:fa26c03 18714 0.884 - - - - - 0.884 - - - wu:fa26c03
75. apex2 ENSDARG00000008472 39 0.884 - - - - - 0.884 - - - APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Source:ZFIN;Acc:ZDB-GENE-040426-835]
76. chrnb1l ENSDARG00000022532, ENSDARG00000113943, ENSDARG00000116196 3 0.884 - - - - - 0.884 - - - cholinergic receptor, nicotinic, beta 1 (muscle) like [Source:ZFIN;Acc:ZDB-GENE-060811-1]
77. CABZ01036951.1 CABZ01036951.1 71 0.884 - - - - - 0.884 - - -
78. TMC2 TMC2 5 0.884 - - - - - 0.884 - - -
79. fbxo43 ENSDARG00000104186 40 0.884 - - - - - 0.884 - - - F-box protein 43 [Source:ZFIN;Acc:ZDB-GENE-040426-1645]
80. si:dkey-9c18.1 si:dkey-9c18.1 3 0.884 - - - - - 0.884 - - -
81. si:dkey-29f21.5 si:dkey-29f21.5 3 0.884 - - - - - 0.884 - - -
82. si:dkey-26h11.2 ENSDARG00000096458 10 0.884 - - - - - 0.884 - - - si:dkey-26h11.2 [Source:ZFIN;Acc:ZDB-GENE-120709-94]
83. CREM_1 CREM_1 9 0.884 - - - - - 0.884 - - -
84. si:ch1073-221c23.2 si:ch1073-221c23.2 17 0.884 - - - - - 0.884 - - -
85. p4ha1a ENSDARG00000033537, ENSDARG00000114754 38 0.884 - - - - - 0.884 - - - prolyl 4-hydroxylase, alpha polypeptide I a [Source:ZFIN;Acc:ZDB-GENE-040724-91]
86. CR854899.1 ENSDARG00000102357 8 0.884 - - - - - 0.884 - - -
87. tti2 ENSDARG00000073773 19 0.884 - - - - - 0.884 - - - TELO2 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-110411-25]
88. pak1_1 ENSDARG00000103959 28 0.884 - - - - - 0.884 - - - p21 protein (Cdc42/Rac)-activated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030826-29]
89. si:ch211-173m16.2 ENSDARG00000093284 186 0.884 - - - - - 0.884 - - - si:ch211-173m16.2 [Source:ZFIN;Acc:ZDB-GENE-070912-155]
90. pth1b ENSDARG00000091961, ENSDARG00000115353 5 0.884 - - - - - 0.884 - - - parathyroid hormone 1b [Source:ZFIN;Acc:ZDB-GENE-040623-2]
91. ntsr1 ENSDARG00000077577, ENSDARG00000112950 14 0.884 - - - - - 0.884 - - - neurotensin receptor 1 (high affinity) [Source:ZFIN;Acc:ZDB-GENE-090313-372]
92. C12H17orf70 C12H17orf70 25 0.884 - - - - - 0.884 - - -
93. mtmr10 ENSDARG00000010601 37 0.884 - - - - - 0.884 - - - myotubularin related protein 10 [Source:ZFIN;Acc:ZDB-GENE-061103-52]
94. si:ch211-145h19.1 31 0.884 - - - - - 0.884 - - - si:ch211-145h19.1
95. BX571969.1 BX571969.1 8 0.884 - - - - - 0.884 - - -
96. TRIM14_11 TRIM14_11 2 0.884 - - - - - 0.884 - - -
97. si:ch73-27e22.3 ENSDARG00000077263 10 0.884 - - - - - 0.884 - - - si:ch73-27e22.3 [Source:ZFIN;Acc:ZDB-GENE-070705-231]
98. ENSDARG00000089152 ENSDARG00000089152 12 0.884 - - - - - 0.884 - - -
99. si:dkey-257e4.5 si:dkey-257e4.5 3 0.884 - - - - - 0.884 - - -
100. vcpip1 ENSDARG00000060177 56 0.884 - - - - - 0.884 - - - valosin containing protein (p97)/p47 complex interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-070912-613]

There are 765 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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