Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CCDC88A

Gene Name Gene ID Reads Annotation
CCDC88A CCDC88A 90










Genes with expression patterns similar to CCDC88A

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. CCDC88A CCDC88A 90 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. fbn1 39 1.797 - 0.913 - - - 0.884 - - - fibrillin 1
3. mmp23bb ENSDARG00000009825 133 1.635 - - - - - 0.809 0.826 - - matrix metallopeptidase 23bb [Source:ZFIN;Acc:ZDB-GENE-050417-448]
4. zgc:110434 21 1.618 - - - - - 0.884 0.734 - - zgc:110434
5. EGR4_1 EGR4_1 14 1.618 - - - - - 0.884 0.734 - -
6. CAMSAP2 CAMSAP2 109 1.618 - - - - - 0.884 0.734 - -
7. ei24 ENSDARG00000053840 78 1.618 - - - - - 0.884 0.734 - - etoposide induced 2.4 [Source:ZFIN;Acc:ZDB-GENE-050417-457]
8. si:ch73-191k20.4 37 1.612 0.728 - - - - 0.884 - - - si:ch73-191k20.4, transcript variant X1
9. PEG3_38 PEG3_38 521 1.575 0.767 0.808 - - - - - - -
10. ctgfa ENSDARG00000042934, ENSDARG00000112741 2123 1.543 - - - - - 0.831 0.712 - - connective tissue growth factor a [Source:ZFIN;Acc:ZDB-GENE-030131-102]
11. rap2ab ENSDARG00000040246 63 1.528 - 0.794 - - - - 0.734 - - RAP2A, member of RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-090312-116]
12. CABZ01077140.1 CABZ01077140.1 2 1.48 - - - - - 0.746 0.734 - -
13. si:dkey-167i21.2 ENSDARG00000093886 10 1.476 - - - - 0.742 - 0.734 - - si:dkey-167i21.2 [Source:ZFIN;Acc:ZDB-GENE-090313-198]
14. loxl5b ENSDARG00000076904 468 1.45 - - - - - 0.708 0.742 - - lysyl oxidase-like 5b [Source:ZFIN;Acc:ZDB-GENE-070818-3]
15. tfpi2 ENSDARG00000061351, ENSDARG00000115583 61 1.434 - 0.702 - - - 0.732 - - - tissue factor pathway inhibitor 2 [Source:ZFIN;Acc:ZDB-GENE-060503-38]
16. cdkn2d ENSDARG00000094176 190 0.94 - 0.940 - - - - - - - cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4) [Source:ZFIN;Acc:ZDB-GENE-110316-1]
17. azi1 azi1 507 0.933 - 0.933 - - - - - - -
18. TMEM100_1 TMEM100_1 44 0.933 - - - - - 0.933 - - -
19. dopey1 438 0.932 - 0.932 - - - - - - - dopey family member 1, transcript variant X4
20. fscn2b ENSDARG00000074396 177 0.924 - - - - - - 0.924 - - fascin actin-bundling protein 2b, retinal [Source:ZFIN;Acc:ZDB-GENE-040426-1740]
21. NEFH NEFH 101 0.921 - - - - 0.921 - - - -
22. BEND2_1 BEND2_1 45 0.917 - 0.917 - - - - - - -
23. FP017295.1 ENSDARG00000091185 22 0.917 - 0.917 - - - - - - -
24. fasn ENSDARG00000087657 99 0.916 - - - - 0.916 - - - - fatty acid synthase [Source:ZFIN;Acc:ZDB-GENE-030131-7802]
25. iqca1 ENSDARG00000057276, ENSDARG00000113642 161 0.915 - 0.915 - - - - - - - IQ motif containing with AAA domain 1 [Source:ZFIN;Acc:ZDB-GENE-050208-768]
26. UNC13A UNC13A 36 0.904 - - - - - 0.904 - - -
27. rnmtl1a 112 0.9 - 0.900 - - - - - - - RNA methyltransferase like 1a
28. clu ENSDARG00000010434 498 0.9 - - - - - 0.900 - - - clusterin [Source:ZFIN;Acc:ZDB-GENE-040426-1774]
29. NTRK3 NTRK3 163 0.895 - - - - - 0.895 - - -
30. ntn1b ENSDARG00000022531 248 0.894 - - - - - 0.894 - - - netrin 1b [Source:ZFIN;Acc:ZDB-GENE-990415-168]
31. proza ENSDARG00000037783, ENSDARG00000116864 500 0.89 - 0.890 - - - - - - - protein Z, vitamin K-dependent plasma glycoprotein a [Source:ZFIN;Acc:ZDB-GENE-061013-403]
32. C9HXorf36 C9HXorf36 44 0.89 - - - - - 0.890 - - -
33. shhb ENSDARG00000038867 338 0.89 - - - - - 0.890 - - - sonic hedgehog b [Source:ZFIN;Acc:ZDB-GENE-980526-41]
34. porcnl ENSDARG00000052455 29 0.888 - 0.888 - - - - - - - porcupine O-acyltransferase like [Source:ZFIN;Acc:ZDB-GENE-030131-5931]
35. zeb1a ENSDARG00000016788 48 0.884 - - - - - 0.884 - - - zinc finger E-box binding homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-070912-124]
36. esyt1b ENSDARG00000014239 8 0.884 - - - - - 0.884 - - - extended synaptotagmin-like protein 1b [Source:ZFIN;Acc:ZDB-GENE-040724-209]
37. tor2a ENSDARG00000100559, ENSDARG00000115324 58 0.884 - - - - - 0.884 - - - torsin family 2, member A [Source:ZFIN;Acc:ZDB-GENE-050913-60]
38. veph veph 3 0.884 - - - - - 0.884 - - -
39. sp2 ENSDARG00000076763, ENSDARG00000113443, ENSDARG00000115477 20 0.884 - - - - - 0.884 - - - sp2 transcription factor [Source:ZFIN;Acc:ZDB-GENE-080410-1]
40. fbxo36a ENSDARG00000010662, ENSDARG00000109843 13 0.884 - - - - - 0.884 - - - F-box protein 36a [Source:ZFIN;Acc:ZDB-GENE-060929-986]
41. dmrt2b ENSDARG00000070013, ENSDARG00000114365, ENSDARG00000114967 57 0.884 - - - - - 0.884 - - - doublesex and mab-3 related transcription factor 2b [Source:ZFIN;Acc:ZDB-GENE-080813-1]
42. si:dkey-250k10.4 ENSDARG00000099751 2 0.884 - - - - - 0.884 - - - si:dkey-250k10.4 [Source:ZFIN;Acc:ZDB-GENE-120703-22]
43. tpgs2 ENSDARG00000011926 48 0.884 - - - - - 0.884 - - - tubulin polyglutamylase complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040704-49]
44. CABZ01036951.1 CABZ01036951.1 71 0.884 - - - - - 0.884 - - -
45. si:ch211-171b20.3 ENSDARG00000094794 2 0.884 - - - - - 0.884 - - - si:ch211-171b20.3 [Source:ZFIN;Acc:ZDB-GENE-091204-278]
46. ENSDARG00000091642 ENSDARG00000091642 14 0.884 - - - - - 0.884 - - -
47. dnmt3aa ENSDARG00000005394 63 0.884 - - - - - 0.884 - - - DNA (cytosine-5-)-methyltransferase 3 alpha a [Source:ZFIN;Acc:ZDB-GENE-050314-5]
48. si:dkey-250k15.4 ENSDARG00000092169 19 0.884 - - - - - 0.884 - - - si:dkey-250k15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-254]
49. si:ch211-145h19.1 31 0.884 - - - - - 0.884 - - - si:ch211-145h19.1
50. CABZ01035647.1 CABZ01035647.1 5 0.884 - - - - - 0.884 - - -
51. RIC3 ENSDARG00000105549 3 0.884 - - - - - 0.884 - - - RIC3 acetylcholine receptor chaperone [Source:HGNC Symbol;Acc:HGNC:30338]
52. apex2 ENSDARG00000008472 39 0.884 - - - - - 0.884 - - - APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Source:ZFIN;Acc:ZDB-GENE-040426-835]
53. carm1l ENSDARG00000091531 13 0.884 - - - - - 0.884 - - - coactivator-associated arginine methyltransferase 1, like [Source:ZFIN;Acc:ZDB-GENE-090312-219]
54. abcc5 ENSDARG00000061233 60 0.884 - - - - - 0.884 - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 5 [Source:ZFIN;Acc:ZDB-GENE-050517-17]
55. fbxo43 ENSDARG00000104186 40 0.884 - - - - - 0.884 - - - F-box protein 43 [Source:ZFIN;Acc:ZDB-GENE-040426-1645]
56. si:dkeyp-87d1.6 si:dkeyp-87d1.6 0 0.884 - - - - - 0.884 - - -
57. lmbrd2a ENSDARG00000099566 15 0.884 - - - - - 0.884 - - - LMBR1 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050417-32]
58. NPM2 NPM2 41 0.884 - - - - - 0.884 - - -
59. ENDOD1_4 ENDOD1_4 2 0.884 - - - - - 0.884 - - -
60. si:dkey-118j18.3 si:dkey-118j18.3 4 0.884 - - - - - 0.884 - - -
61. si:ch211-225h9.2 si:ch211-225h9.2 16 0.884 - - - - - 0.884 - - -
62. si:ch211-226h7.4 si:ch211-226h7.4 0 0.884 - - - - - 0.884 - - -
63. si:dkey-43b14.6 si:dkey-43b14.6 20 0.884 - - - - - 0.884 - - -
64. hel_dr4 hel_dr4 12 0.884 - - - - - 0.884 - - -
65. CABZ01113978.1 CABZ01113978.1 1 0.884 - - - - - 0.884 - - -
66. si:dkey-117n7.4 ENSDARG00000092064 22 0.884 - - - - - 0.884 - - - si:dkey-117n7.4 [Source:ZFIN;Acc:ZDB-GENE-060503-237]
67. si:ch211-218c6.9 si:ch211-218c6.9 40 0.884 - - - - - 0.884 - - -
68. SYN3 0 0.884 - - - - - 0.884 - - - synapsin III
69. si:dkey-9c18.1 si:dkey-9c18.1 3 0.884 - - - - - 0.884 - - -
70. hp ENSDARG00000051890, ENSDARG00000095807 4 0.884 - - - - - 0.884 - - - haptoglobin [Source:ZFIN;Acc:ZDB-GENE-030131-1259]
71. KCNJ12 KCNJ12 17 0.884 - - - - - 0.884 - - -
72. si:ch73-381a20.2 si:ch73-381a20.2 11 0.884 - - - - - 0.884 - - -
73. AL928685.1 ENSDARG00000095786 0 0.884 - - - - - 0.884 - - -
74. PPFIBP1 PPFIBP1 46 0.884 - - - - - 0.884 - - -
75. CR854899.1 ENSDARG00000102357 8 0.884 - - - - - 0.884 - - -
76. si:ch73-341k19.1 ENSDARG00000095946 5 0.884 - - - - - 0.884 - - - si:ch73-341k19.1 [Source:ZFIN;Acc:ZDB-GENE-110411-201]
77. si:ch73-111e15.1 ENSDARG00000008182 2 0.884 - - - - - 0.884 - - - si:ch73-111e15.1 [Source:ZFIN;Acc:ZDB-GENE-110411-28]
78. ENSDARG00000089152 ENSDARG00000089152 12 0.884 - - - - - 0.884 - - -
79. ENSDARG00000086666 ENSDARG00000086666 2159 0.884 - - - - - 0.884 - - -
80. tlr1 ENSDARG00000100649 2 0.884 - - - - - 0.884 - - - toll-like receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040220-1]
81. pak1_1 ENSDARG00000103959 28 0.884 - - - - - 0.884 - - - p21 protein (Cdc42/Rac)-activated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030826-29]
82. si:dkey-40j3.3 ENSDARG00000103597 5 0.884 - - - - - 0.884 - - - si:dkey-40j3.3 [Source:ZFIN;Acc:ZDB-GENE-110913-109]
83. aven ENSDARG00000002894 49 0.884 - - - - - 0.884 - - - apoptosis, caspase activation inhibitor [Source:ZFIN;Acc:ZDB-GENE-041001-171]
84. si:dkey-29f21.5 si:dkey-29f21.5 3 0.884 - - - - - 0.884 - - -
85. ptpn20 ENSDARG00000075459 1 0.884 - - - - - 0.884 - - - protein tyrosine phosphatase, non-receptor type 20 [Source:ZFIN;Acc:ZDB-GENE-090313-90]
86. si:ch73-27e22.3 ENSDARG00000077263 10 0.884 - - - - - 0.884 - - - si:ch73-27e22.3 [Source:ZFIN;Acc:ZDB-GENE-070705-231]
87. U1_54 U1_54 0 0.884 - - - - - 0.884 - - -
88. slc4a4b ENSDARG00000044808 9 0.884 - - - - - 0.884 - - - solute carrier family 4 (sodium bicarbonate cotransporter), member 4b [Source:ZFIN;Acc:ZDB-GENE-091030-1]
89. elavl2 ENSDARG00000040732 44 0.884 - - - - - 0.884 - - - ELAV like neuron-specific RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040704-9]
90. si:ch211-113a14.15_1 2 0.884 - - - - - 0.884 - - - si:ch211-113a14.15
91. si:ch211-132b12.2 ENSDARG00000094946 15 0.884 - - - - - 0.884 - - - si:ch211-132b12.2 [Source:ZFIN;Acc:ZDB-GENE-050420-178]
92. hbaa2 ENSDARG00000069735 10 0.884 - - - - - 0.884 - - - hemoglobin, alpha adult 2 [Source:ZFIN;Acc:ZDB-GENE-081104-38]
93. kcnq2a ENSDARG00000075307 7 0.884 - - - - - 0.884 - - - potassium voltage-gated channel, KQT-like subfamily, member 2a [Source:ZFIN;Acc:ZDB-GENE-080220-37]
94. BX294653.4 BX294653.4 1 0.884 - - - - - 0.884 - - -
95. si:dkey-20j1.5 si:dkey-20j1.5 1 0.884 - - - - - 0.884 - - -
96. si:ch211-173n18.3 ENSDARG00000028478 8 0.884 - - - - - 0.884 - - - si:ch211-173n18.3 [Source:ZFIN;Acc:ZDB-GENE-120215-62]
97. fhl1a ENSDARG00000071498, ENSDARG00000115132 164 0.884 - - - - - 0.884 - - - four and a half LIM domains 1a [Source:ZFIN;Acc:ZDB-GENE-040206-1]
98. si:ch1073-185p12.2 ENSDARG00000100199 7 0.884 - - - - - 0.884 - - - si:ch1073-185p12.2 [Source:ZFIN;Acc:ZDB-GENE-110411-196]
99. atp8b5a ENSDARG00000062040 1 0.884 - - - - - 0.884 - - - ATPase phospholipid transporting 8B5a [Source:ZFIN;Acc:ZDB-GENE-060531-48]
100. ungb ENSDARG00000094922 16 0.884 - - - - - 0.884 - - - uracil DNA glycosylase b [Source:ZFIN;Acc:ZDB-GENE-070705-360]

There are 765 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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