Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CCDC88A

Gene Name Gene ID Reads Annotation
CCDC88A CCDC88A 90










Genes with expression patterns similar to CCDC88A

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. CCDC88A CCDC88A 90 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. fbn1 39 1.797 - 0.913 - - - 0.884 - - - fibrillin 1
3. mmp23bb ENSDARG00000009825 133 1.635 - - - - - 0.809 0.826 - - matrix metallopeptidase 23bb [Source:ZFIN;Acc:ZDB-GENE-050417-448]
4. EGR4_1 EGR4_1 14 1.618 - - - - - 0.884 0.734 - -
5. CAMSAP2 CAMSAP2 109 1.618 - - - - - 0.884 0.734 - -
6. zgc:110434 21 1.618 - - - - - 0.884 0.734 - - zgc:110434
7. ei24 ENSDARG00000053840 78 1.618 - - - - - 0.884 0.734 - - etoposide induced 2.4 [Source:ZFIN;Acc:ZDB-GENE-050417-457]
8. si:ch73-191k20.4 37 1.612 0.728 - - - - 0.884 - - - si:ch73-191k20.4, transcript variant X1
9. PEG3_38 PEG3_38 521 1.575 0.767 0.808 - - - - - - -
10. ctgfa ENSDARG00000042934, ENSDARG00000112741 2123 1.543 - - - - - 0.831 0.712 - - connective tissue growth factor a [Source:ZFIN;Acc:ZDB-GENE-030131-102]
11. rap2ab ENSDARG00000040246 63 1.528 - 0.794 - - - - 0.734 - - RAP2A, member of RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-090312-116]
12. CABZ01077140.1 CABZ01077140.1 2 1.48 - - - - - 0.746 0.734 - -
13. si:dkey-167i21.2 ENSDARG00000093886 10 1.476 - - - - 0.742 - 0.734 - - si:dkey-167i21.2 [Source:ZFIN;Acc:ZDB-GENE-090313-198]
14. loxl5b ENSDARG00000076904 468 1.45 - - - - - 0.708 0.742 - - lysyl oxidase-like 5b [Source:ZFIN;Acc:ZDB-GENE-070818-3]
15. tfpi2 ENSDARG00000061351, ENSDARG00000115583 61 1.434 - 0.702 - - - 0.732 - - - tissue factor pathway inhibitor 2 [Source:ZFIN;Acc:ZDB-GENE-060503-38]
16. cdkn2d ENSDARG00000094176 190 0.94 - 0.940 - - - - - - - cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4) [Source:ZFIN;Acc:ZDB-GENE-110316-1]
17. azi1 azi1 507 0.933 - 0.933 - - - - - - -
18. TMEM100_1 TMEM100_1 44 0.933 - - - - - 0.933 - - -
19. dopey1 438 0.932 - 0.932 - - - - - - - dopey family member 1, transcript variant X4
20. fscn2b ENSDARG00000074396 177 0.924 - - - - - - 0.924 - - fascin actin-bundling protein 2b, retinal [Source:ZFIN;Acc:ZDB-GENE-040426-1740]
21. NEFH NEFH 101 0.921 - - - - 0.921 - - - -
22. FP017295.1 ENSDARG00000091185 22 0.917 - 0.917 - - - - - - -
23. BEND2_1 BEND2_1 45 0.917 - 0.917 - - - - - - -
24. fasn ENSDARG00000087657 99 0.916 - - - - 0.916 - - - - fatty acid synthase [Source:ZFIN;Acc:ZDB-GENE-030131-7802]
25. iqca1 ENSDARG00000057276, ENSDARG00000113642 161 0.915 - 0.915 - - - - - - - IQ motif containing with AAA domain 1 [Source:ZFIN;Acc:ZDB-GENE-050208-768]
26. UNC13A UNC13A 36 0.904 - - - - - 0.904 - - -
27. rnmtl1a 112 0.9 - 0.900 - - - - - - - RNA methyltransferase like 1a
28. clu ENSDARG00000010434 498 0.9 - - - - - 0.900 - - - clusterin [Source:ZFIN;Acc:ZDB-GENE-040426-1774]
29. NTRK3 NTRK3 163 0.895 - - - - - 0.895 - - -
30. ntn1b ENSDARG00000022531 248 0.894 - - - - - 0.894 - - - netrin 1b [Source:ZFIN;Acc:ZDB-GENE-990415-168]
31. C9HXorf36 C9HXorf36 44 0.89 - - - - - 0.890 - - -
32. shhb ENSDARG00000038867 338 0.89 - - - - - 0.890 - - - sonic hedgehog b [Source:ZFIN;Acc:ZDB-GENE-980526-41]
33. proza ENSDARG00000037783, ENSDARG00000116864 500 0.89 - 0.890 - - - - - - - protein Z, vitamin K-dependent plasma glycoprotein a [Source:ZFIN;Acc:ZDB-GENE-061013-403]
34. porcnl ENSDARG00000052455 29 0.888 - 0.888 - - - - - - - porcupine O-acyltransferase like [Source:ZFIN;Acc:ZDB-GENE-030131-5931]
35. adarb1b ENSDARG00000003544 31 0.884 - - - - - 0.884 - - - adenosine deaminase, RNA-specific, B1b [Source:ZFIN;Acc:ZDB-GENE-030219-15]
36. si:dkey-32n7.8 ENSDARG00000090630 0 0.884 - - - - - 0.884 - - - si:dkey-32n7.8 [Source:ZFIN;Acc:ZDB-GENE-121214-326]
37. dnmt3aa ENSDARG00000005394 63 0.884 - - - - - 0.884 - - - DNA (cytosine-5-)-methyltransferase 3 alpha a [Source:ZFIN;Acc:ZDB-GENE-050314-5]
38. ENSDARG00000086666 ENSDARG00000086666 2159 0.884 - - - - - 0.884 - - -
39. BX294653.4 BX294653.4 1 0.884 - - - - - 0.884 - - -
40. aven ENSDARG00000002894 49 0.884 - - - - - 0.884 - - - apoptosis, caspase activation inhibitor [Source:ZFIN;Acc:ZDB-GENE-041001-171]
41. si:ch73-341k19.1 ENSDARG00000095946 5 0.884 - - - - - 0.884 - - - si:ch73-341k19.1 [Source:ZFIN;Acc:ZDB-GENE-110411-201]
42. atp8b5a ENSDARG00000062040 1 0.884 - - - - - 0.884 - - - ATPase phospholipid transporting 8B5a [Source:ZFIN;Acc:ZDB-GENE-060531-48]
43. zgc:162879 ENSDARG00000074163 6 0.884 - - - - - 0.884 - - - zgc:162879 [Source:ZFIN;Acc:ZDB-GENE-070424-92]
44. si:dkeyp-87d1.6 si:dkeyp-87d1.6 0 0.884 - - - - - 0.884 - - -
45. si:ch211-218c6.9 si:ch211-218c6.9 40 0.884 - - - - - 0.884 - - -
46. heatr1 ENSDARG00000099742 92 0.884 - - - - - 0.884 - - - HEAT repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6378]
47. si:dkey-118j18.3 si:dkey-118j18.3 4 0.884 - - - - - 0.884 - - -
48. si:dkey-257e4.5 si:dkey-257e4.5 3 0.884 - - - - - 0.884 - - -
49. ENSDARG00000089152 ENSDARG00000089152 12 0.884 - - - - - 0.884 - - -
50. vcpip1 ENSDARG00000060177 56 0.884 - - - - - 0.884 - - - valosin containing protein (p97)/p47 complex interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-070912-613]
51. si:ch73-381a20.2 si:ch73-381a20.2 11 0.884 - - - - - 0.884 - - -
52. si:dkey-250k10.4 ENSDARG00000099751 2 0.884 - - - - - 0.884 - - - si:dkey-250k10.4 [Source:ZFIN;Acc:ZDB-GENE-120703-22]
53. slc4a4b ENSDARG00000044808 9 0.884 - - - - - 0.884 - - - solute carrier family 4 (sodium bicarbonate cotransporter), member 4b [Source:ZFIN;Acc:ZDB-GENE-091030-1]
54. kcnq2a ENSDARG00000075307 7 0.884 - - - - - 0.884 - - - potassium voltage-gated channel, KQT-like subfamily, member 2a [Source:ZFIN;Acc:ZDB-GENE-080220-37]
55. si:ch211-171b20.3 ENSDARG00000094794 2 0.884 - - - - - 0.884 - - - si:ch211-171b20.3 [Source:ZFIN;Acc:ZDB-GENE-091204-278]
56. esyt1b ENSDARG00000014239 8 0.884 - - - - - 0.884 - - - extended synaptotagmin-like protein 1b [Source:ZFIN;Acc:ZDB-GENE-040724-209]
57. tpgs2 ENSDARG00000011926 48 0.884 - - - - - 0.884 - - - tubulin polyglutamylase complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040704-49]
58. PEG3_34 PEG3_34 0 0.884 - - - - - 0.884 - - -
59. si:ch1073-403i13.1 si:ch1073-403i13.1 1 0.884 - - - - - 0.884 - - -
60. si:dkey-14o18.1 si:dkey-14o18.1 108 0.884 - - - - - 0.884 - - -
61. cntn2 ENSDARG00000000472, ENSDARG00000110222 3 0.884 - - - - - 0.884 - - - contactin 2 [Source:ZFIN;Acc:ZDB-GENE-990630-12]
62. si:ch73-335d12.1 si:ch73-335d12.1 1 0.884 - - - - - 0.884 - - -
63. CR847844.3 CR847844.3 1 0.884 - - - - - 0.884 - - -
64. HTR7 17 0.884 - - - - - 0.884 - - - 5-hydroxytryptamine receptor 7
65. EGFR_1 EGFR_1 2 0.884 - - - - - 0.884 - - -
66. si:dkey-20j1.5 si:dkey-20j1.5 1 0.884 - - - - - 0.884 - - -
67. DEPDC7 19 0.884 - - - - - 0.884 - - - DEP domain containing 7, transcript variant X1
68. ENSDARG00000091642 ENSDARG00000091642 14 0.884 - - - - - 0.884 - - -
69. CABZ01113978.1 CABZ01113978.1 1 0.884 - - - - - 0.884 - - -
70. gcnt4b ENSDARG00000077550 2 0.884 - - - - - 0.884 - - - glucosaminyl (N-acetyl) transferase 4, core 2, b [Source:ZFIN;Acc:ZDB-GENE-091118-69]
71. ungb ENSDARG00000094922 16 0.884 - - - - - 0.884 - - - uracil DNA glycosylase b [Source:ZFIN;Acc:ZDB-GENE-070705-360]
72. si:ch1073-185p12.2 ENSDARG00000100199 7 0.884 - - - - - 0.884 - - - si:ch1073-185p12.2 [Source:ZFIN;Acc:ZDB-GENE-110411-196]
73. lmbrd2a ENSDARG00000099566 15 0.884 - - - - - 0.884 - - - LMBR1 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050417-32]
74. AHNAK2 AHNAK2 33 0.884 - - - - - 0.884 - - -
75. fhl1a ENSDARG00000071498, ENSDARG00000115132 164 0.884 - - - - - 0.884 - - - four and a half LIM domains 1a [Source:ZFIN;Acc:ZDB-GENE-040206-1]
76. coch ENSDARG00000024032 7 0.884 - - - - - 0.884 - - - coagulation factor C homolog, cochlin (Limulus polyphemus) [Source:ZFIN;Acc:ZDB-GENE-030616-403]
77. si:dkey-247i3.1 ENSDARG00000076252 11 0.884 - - - - - 0.884 - - - si:dkey-247i3.1 [Source:ZFIN;Acc:ZDB-GENE-110913-84]
78. SYN3 0 0.884 - - - - - 0.884 - - - synapsin III
79. vtg2 ENSDARG00000055809, ENSDARG00000111529, ENSDARG00000114568 3 0.884 - - - - - 0.884 - - - vitellogenin 2 [Source:ZFIN;Acc:ZDB-GENE-001201-2]
80. si:ch211-226h7.4 si:ch211-226h7.4 0 0.884 - - - - - 0.884 - - -
81. si:ch211-22k7.8 si:ch211-22k7.8 0 0.884 - - - - - 0.884 - - -
82. hbaa2 ENSDARG00000069735 10 0.884 - - - - - 0.884 - - - hemoglobin, alpha adult 2 [Source:ZFIN;Acc:ZDB-GENE-081104-38]
83. si:ch211-225h9.2 si:ch211-225h9.2 16 0.884 - - - - - 0.884 - - -
84. CABZ01035647.1 CABZ01035647.1 5 0.884 - - - - - 0.884 - - -
85. si:dkey-161j23.6 ENSDARG00000092347 0 0.884 - - - - - 0.884 - - - si:dkey-161j23.6 [Source:ZFIN;Acc:ZDB-GENE-091204-173]
86. zgc:153921 ENSDARG00000020738, ENSDARG00000038405 34 0.884 - - - - - 0.884 - - - zgc:153921 [Source:ZFIN;Acc:ZDB-GENE-060929-816]
87. cbx7b ENSDARG00000087181 5 0.884 - - - - - 0.884 - - - chromobox homolog 7b [Source:ZFIN;Acc:ZDB-GENE-110613-2]
88. zgc:136902 zgc:136902 4 0.884 - - - - - 0.884 - - -
89. sdhaf1 ENSDARG00000092478 51 0.884 - - - - - 0.884 - - - succinate dehydrogenase complex assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-050809-56]
90. BX569793.1 ENSDARG00000096832 0 0.884 - - - - - 0.884 - - -
91. si:ch211-113a14.15_1 2 0.884 - - - - - 0.884 - - - si:ch211-113a14.15
92. tlr1 ENSDARG00000100649 2 0.884 - - - - - 0.884 - - - toll-like receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040220-1]
93. BX005421.3 ENSDARG00000114309 7 0.884 - - - - - 0.884 - - -
94. col5a2b ENSDARG00000024847 17 0.884 - - - - - 0.884 - - - collagen, type V, alpha 2b [Source:ZFIN;Acc:ZDB-GENE-110406-2]
95. sp2 ENSDARG00000076763, ENSDARG00000113443, ENSDARG00000115477 20 0.884 - - - - - 0.884 - - - sp2 transcription factor [Source:ZFIN;Acc:ZDB-GENE-080410-1]
96. CABZ01079804.1 ENSDARG00000117619 1 0.884 - - - - - 0.884 - - -
97. AL928685.1 ENSDARG00000095786 0 0.884 - - - - - 0.884 - - -
98. PPFIBP1 PPFIBP1 46 0.884 - - - - - 0.884 - - -
99. si:ch211-223g7.7 si:ch211-223g7.7 1 0.884 - - - - - 0.884 - - -
100. ZNF337 ZNF337 3 0.884 - - - - - 0.884 - - -

There are 765 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA