Zebrafish data search
Results for CCDC88A
| Gene Name | Gene ID | Reads | Annotation |
|---|---|---|---|
| CCDC88A | CCDC88A | 90 |
Genes with expression patterns similar to CCDC88A
| Nr. | Gene Name | Gene ID | Reads | Σ scores | 28hpf trunk1 | 28hpf trunk2 | 28hpf whole1 | 28hpf whole2 | 28hpf whole3 PA | 40hpf trunk1 | 40hpf trunk2 | 40hpf whole embryo1 | 40hpf whole embryo2 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | CCDC88A | CCDC88A | 90 | 9 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | |
| 2. | fbn1 | 39 | 1.797 | - | 0.913 | - | - | - | 0.884 | - | - | - | fibrillin 1 | |
| 3. | mmp23bb | ENSDARG00000009825 | 133 | 1.635 | - | - | - | - | - | 0.809 | 0.826 | - | - | matrix metallopeptidase 23bb [Source:ZFIN;Acc:ZDB-GENE-050417-448] |
| 4. | EGR4_1 | EGR4_1 | 14 | 1.618 | - | - | - | - | - | 0.884 | 0.734 | - | - | |
| 5. | zgc:110434 | 21 | 1.618 | - | - | - | - | - | 0.884 | 0.734 | - | - | zgc:110434 | |
| 6. | ei24 | ENSDARG00000053840 | 78 | 1.618 | - | - | - | - | - | 0.884 | 0.734 | - | - | etoposide induced 2.4 [Source:ZFIN;Acc:ZDB-GENE-050417-457] |
| 7. | CAMSAP2 | CAMSAP2 | 109 | 1.618 | - | - | - | - | - | 0.884 | 0.734 | - | - | |
| 8. | si:ch73-191k20.4 | 37 | 1.612 | 0.728 | - | - | - | - | 0.884 | - | - | - | si:ch73-191k20.4, transcript variant X1 | |
| 9. | PEG3_38 | PEG3_38 | 521 | 1.575 | 0.767 | 0.808 | - | - | - | - | - | - | - | |
| 10. | ctgfa | ENSDARG00000042934, ENSDARG00000112741 | 2123 | 1.543 | - | - | - | - | - | 0.831 | 0.712 | - | - | connective tissue growth factor a [Source:ZFIN;Acc:ZDB-GENE-030131-102] |
| 11. | rap2ab | ENSDARG00000040246 | 63 | 1.528 | - | 0.794 | - | - | - | - | 0.734 | - | - | RAP2A, member of RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-090312-116] |
| 12. | CABZ01077140.1 | CABZ01077140.1 | 2 | 1.48 | - | - | - | - | - | 0.746 | 0.734 | - | - | |
| 13. | si:dkey-167i21.2 | ENSDARG00000093886 | 10 | 1.476 | - | - | - | - | 0.742 | - | 0.734 | - | - | si:dkey-167i21.2 [Source:ZFIN;Acc:ZDB-GENE-090313-198] |
| 14. | loxl5b | ENSDARG00000076904 | 468 | 1.45 | - | - | - | - | - | 0.708 | 0.742 | - | - | lysyl oxidase-like 5b [Source:ZFIN;Acc:ZDB-GENE-070818-3] |
| 15. | tfpi2 | ENSDARG00000061351, ENSDARG00000115583 | 61 | 1.434 | - | 0.702 | - | - | - | 0.732 | - | - | - | tissue factor pathway inhibitor 2 [Source:ZFIN;Acc:ZDB-GENE-060503-38] |
| 16. | cdkn2d | ENSDARG00000094176 | 190 | 0.94 | - | 0.940 | - | - | - | - | - | - | - | cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4) [Source:ZFIN;Acc:ZDB-GENE-110316-1] |
| 17. | TMEM100_1 | TMEM100_1 | 44 | 0.933 | - | - | - | - | - | 0.933 | - | - | - | |
| 18. | azi1 | azi1 | 507 | 0.933 | - | 0.933 | - | - | - | - | - | - | - | |
| 19. | dopey1 | 438 | 0.932 | - | 0.932 | - | - | - | - | - | - | - | dopey family member 1, transcript variant X4 | |
| 20. | fscn2b | ENSDARG00000074396 | 177 | 0.924 | - | - | - | - | - | - | 0.924 | - | - | fascin actin-bundling protein 2b, retinal [Source:ZFIN;Acc:ZDB-GENE-040426-1740] |
| 21. | NEFH | NEFH | 101 | 0.921 | - | - | - | - | 0.921 | - | - | - | - | |
| 22. | FP017295.1 | ENSDARG00000091185 | 22 | 0.917 | - | 0.917 | - | - | - | - | - | - | - | |
| 23. | BEND2_1 | BEND2_1 | 45 | 0.917 | - | 0.917 | - | - | - | - | - | - | - | |
| 24. | fasn | ENSDARG00000087657 | 99 | 0.916 | - | - | - | - | 0.916 | - | - | - | - | fatty acid synthase [Source:ZFIN;Acc:ZDB-GENE-030131-7802] |
| 25. | iqca1 | ENSDARG00000057276, ENSDARG00000113642 | 161 | 0.915 | - | 0.915 | - | - | - | - | - | - | - | IQ motif containing with AAA domain 1 [Source:ZFIN;Acc:ZDB-GENE-050208-768] |
| 26. | UNC13A | UNC13A | 36 | 0.904 | - | - | - | - | - | 0.904 | - | - | - | |
| 27. | rnmtl1a | 112 | 0.9 | - | 0.900 | - | - | - | - | - | - | - | RNA methyltransferase like 1a | |
| 28. | clu | ENSDARG00000010434 | 498 | 0.9 | - | - | - | - | - | 0.900 | - | - | - | clusterin [Source:ZFIN;Acc:ZDB-GENE-040426-1774] |
| 29. | NTRK3 | NTRK3 | 163 | 0.895 | - | - | - | - | - | 0.895 | - | - | - | |
| 30. | ntn1b | ENSDARG00000022531 | 248 | 0.894 | - | - | - | - | - | 0.894 | - | - | - | netrin 1b [Source:ZFIN;Acc:ZDB-GENE-990415-168] |
| 31. | proza | ENSDARG00000037783, ENSDARG00000116864 | 500 | 0.89 | - | 0.890 | - | - | - | - | - | - | - | protein Z, vitamin K-dependent plasma glycoprotein a [Source:ZFIN;Acc:ZDB-GENE-061013-403] |
| 32. | shhb | ENSDARG00000038867 | 338 | 0.89 | - | - | - | - | - | 0.890 | - | - | - | sonic hedgehog b [Source:ZFIN;Acc:ZDB-GENE-980526-41] |
| 33. | C9HXorf36 | C9HXorf36 | 44 | 0.89 | - | - | - | - | - | 0.890 | - | - | - | |
| 34. | porcnl | ENSDARG00000052455 | 29 | 0.888 | - | 0.888 | - | - | - | - | - | - | - | porcupine O-acyltransferase like [Source:ZFIN;Acc:ZDB-GENE-030131-5931] |
| 35. | slc4a4b | ENSDARG00000044808 | 9 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | solute carrier family 4 (sodium bicarbonate cotransporter), member 4b [Source:ZFIN;Acc:ZDB-GENE-091030-1] |
| 36. | or125-4 | ENSDARG00000095417 | 2 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | odorant receptor, family E, subfamily 125, member 4 [Source:ZFIN;Acc:ZDB-GENE-070806-94] |
| 37. | BX294653.4 | BX294653.4 | 1 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | |
| 38. | si:ch73-335d12.1 | si:ch73-335d12.1 | 1 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | |
| 39. | si:ch211-225h9.2 | si:ch211-225h9.2 | 16 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | |
| 40. | napgl | napgl | 39 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | |
| 41. | carm1l | ENSDARG00000091531 | 13 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | coactivator-associated arginine methyltransferase 1, like [Source:ZFIN;Acc:ZDB-GENE-090312-219] |
| 42. | elavl2 | ENSDARG00000040732 | 44 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | ELAV like neuron-specific RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040704-9] |
| 43. | si:dkey-161j23.6 | ENSDARG00000092347 | 0 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | si:dkey-161j23.6 [Source:ZFIN;Acc:ZDB-GENE-091204-173] |
| 44. | si:dkey-250k10.4 | ENSDARG00000099751 | 2 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | si:dkey-250k10.4 [Source:ZFIN;Acc:ZDB-GENE-120703-22] |
| 45. | pak1_1 | ENSDARG00000103959 | 28 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | p21 protein (Cdc42/Rac)-activated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030826-29] |
| 46. | veph | veph | 3 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | |
| 47. | ntsr1 | ENSDARG00000077577, ENSDARG00000112950 | 14 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | neurotensin receptor 1 (high affinity) [Source:ZFIN;Acc:ZDB-GENE-090313-372] |
| 48. | zgc:162879 | ENSDARG00000074163 | 6 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | zgc:162879 [Source:ZFIN;Acc:ZDB-GENE-070424-92] |
| 49. | cbx7b | ENSDARG00000087181 | 5 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | chromobox homolog 7b [Source:ZFIN;Acc:ZDB-GENE-110613-2] |
| 50. | tor2a | ENSDARG00000100559, ENSDARG00000115324 | 58 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | torsin family 2, member A [Source:ZFIN;Acc:ZDB-GENE-050913-60] |
| 51. | SYN3 | 0 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | synapsin III | |
| 52. | si:ch211-173n18.3 | ENSDARG00000028478 | 8 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | si:ch211-173n18.3 [Source:ZFIN;Acc:ZDB-GENE-120215-62] |
| 53. | BX571969.1 | BX571969.1 | 8 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | |
| 54. | coch | ENSDARG00000024032 | 7 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | coagulation factor C homolog, cochlin (Limulus polyphemus) [Source:ZFIN;Acc:ZDB-GENE-030616-403] |
| 55. | si:dkeyp-87d1.6 | si:dkeyp-87d1.6 | 0 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | |
| 56. | mtmr10 | ENSDARG00000010601 | 37 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | myotubularin related protein 10 [Source:ZFIN;Acc:ZDB-GENE-061103-52] |
| 57. | CABZ01036951.1 | CABZ01036951.1 | 71 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | |
| 58. | abcc5 | ENSDARG00000061233 | 60 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | ATP-binding cassette, sub-family C (CFTR/MRP), member 5 [Source:ZFIN;Acc:ZDB-GENE-050517-17] |
| 59. | PEG3_34 | PEG3_34 | 0 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | |
| 60. | si:dkey-20j1.5 | si:dkey-20j1.5 | 1 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | |
| 61. | chrnb1l | ENSDARG00000022532, ENSDARG00000113943, ENSDARG00000116196 | 3 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | cholinergic receptor, nicotinic, beta 1 (muscle) like [Source:ZFIN;Acc:ZDB-GENE-060811-1] |
| 62. | fbxo36a | ENSDARG00000010662, ENSDARG00000109843 | 13 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | F-box protein 36a [Source:ZFIN;Acc:ZDB-GENE-060929-986] |
| 63. | si:dkey-32n7.8 | ENSDARG00000090630 | 0 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | si:dkey-32n7.8 [Source:ZFIN;Acc:ZDB-GENE-121214-326] |
| 64. | NPM2 | NPM2 | 41 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | |
| 65. | si:dkey-14o18.1 | si:dkey-14o18.1 | 108 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | |
| 66. | si:ch73-341k19.1 | ENSDARG00000095946 | 5 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | si:ch73-341k19.1 [Source:ZFIN;Acc:ZDB-GENE-110411-201] |
| 67. | CABZ01078520.1 | CABZ01078520.1 | 2 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | |
| 68. | pi15b | ENSDARG00000061292 | 1 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | peptidase inhibitor 15b [Source:ZFIN;Acc:ZDB-GENE-070912-590] |
| 69. | si:dkey-257e4.5 | si:dkey-257e4.5 | 3 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | |
| 70. | zeb1a | ENSDARG00000016788 | 48 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | zinc finger E-box binding homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-070912-124] |
| 71. | gcnt4b | ENSDARG00000077550 | 2 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | glucosaminyl (N-acetyl) transferase 4, core 2, b [Source:ZFIN;Acc:ZDB-GENE-091118-69] |
| 72. | KCNJ12 | KCNJ12 | 17 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | |
| 73. | si:dkey-43b14.6 | si:dkey-43b14.6 | 20 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | |
| 74. | sdhaf1 | ENSDARG00000092478 | 51 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | succinate dehydrogenase complex assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-050809-56] |
| 75. | adarb1b | ENSDARG00000003544 | 31 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | adenosine deaminase, RNA-specific, B1b [Source:ZFIN;Acc:ZDB-GENE-030219-15] |
| 76. | atp8b5a | ENSDARG00000062040 | 1 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | ATPase phospholipid transporting 8B5a [Source:ZFIN;Acc:ZDB-GENE-060531-48] |
| 77. | tti2 | ENSDARG00000073773 | 19 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | TELO2 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-110411-25] |
| 78. | si:ch211-173m16.2 | ENSDARG00000093284 | 186 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | si:ch211-173m16.2 [Source:ZFIN;Acc:ZDB-GENE-070912-155] |
| 79. | sp2 | ENSDARG00000076763, ENSDARG00000113443, ENSDARG00000115477 | 20 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | sp2 transcription factor [Source:ZFIN;Acc:ZDB-GENE-080410-1] |
| 80. | si:dkey-26h11.2 | ENSDARG00000096458 | 10 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | si:dkey-26h11.2 [Source:ZFIN;Acc:ZDB-GENE-120709-94] |
| 81. | si:ch211-223g7.7 | si:ch211-223g7.7 | 1 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | |
| 82. | C12H17orf70 | C12H17orf70 | 25 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | |
| 83. | DEPDC7 | 19 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | DEP domain containing 7, transcript variant X1 | |
| 84. | si:dkey-247i3.1 | ENSDARG00000076252 | 11 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | si:dkey-247i3.1 [Source:ZFIN;Acc:ZDB-GENE-110913-84] |
| 85. | ENSDARG00000089152 | ENSDARG00000089152 | 12 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | |
| 86. | si:ch73-27e22.3 | ENSDARG00000077263 | 10 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | si:ch73-27e22.3 [Source:ZFIN;Acc:ZDB-GENE-070705-231] |
| 87. | RIC3 | ENSDARG00000105549 | 3 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | RIC3 acetylcholine receptor chaperone [Source:HGNC Symbol;Acc:HGNC:30338] |
| 88. | tlr1 | ENSDARG00000100649 | 2 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | toll-like receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040220-1] |
| 89. | si:ch211-171b20.3 | ENSDARG00000094794 | 2 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | si:ch211-171b20.3 [Source:ZFIN;Acc:ZDB-GENE-091204-278] |
| 90. | si:ch1073-403i13.1 | si:ch1073-403i13.1 | 1 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | |
| 91. | hel_dr4 | hel_dr4 | 12 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | |
| 92. | si:ch211-122l14.7 | ENSDARG00000095576 | 5 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | si:ch211-122l14.7 [Source:ZFIN;Acc:ZDB-GENE-041014-263] |
| 93. | si:ch1073-185p12.2 | ENSDARG00000100199 | 7 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | si:ch1073-185p12.2 [Source:ZFIN;Acc:ZDB-GENE-110411-196] |
| 94. | si:ch1073-221c23.2 | si:ch1073-221c23.2 | 17 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | |
| 95. | si:ch211-207o17.8 | si:ch211-207o17.8 | 1 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | |
| 96. | ngb | ENSDARG00000053475, ENSDARG00000116651 | 33 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | neuroglobin [Source:ZFIN;Acc:ZDB-GENE-011102-1] |
| 97. | PPFIBP1 | PPFIBP1 | 46 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | |
| 98. | p4ha1a | ENSDARG00000033537, ENSDARG00000114754 | 38 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | prolyl 4-hydroxylase, alpha polypeptide I a [Source:ZFIN;Acc:ZDB-GENE-040724-91] |
| 99. | zgc:136902 | zgc:136902 | 4 | 0.884 | - | - | - | - | - | 0.884 | - | - | - | |
| 100. | si:dkey-29f21.5 | si:dkey-29f21.5 | 3 | 0.884 | - | - | - | - | - | 0.884 | - | - | - |
There are 765 more genes with r >= 0.7
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C.
Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA