Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CCDC85A

Gene Name Gene ID Reads Annotation
CCDC85A ENSGALG00000043080 7624 coiled-coil domain containing 85A [Source:HGNC Symbol;Acc:HGNC:29400]











Genes with expression patterns similar to CCDC85A

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CCDC85A ENSGALG00000043080 7624 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 coiled-coil domain containing 85A [Source:HGNC Symbol;Acc:HGNC:29400]
2. COX4I1 68632 1.774 - - - - - - 0.992 - - 0.782 cytochrome c oxidase subunit 4I1, transcript variant X1
3. UQCR11 ENSGALG00000001096 25245 1.702 - - - - - - 0.998 - - 0.704 ubiquinol-cytochrome c reductase, complex III subunit XI [Source:NCBI gene;Acc:770135]
4. TOMM70A TOMM70A 24085 1.692 - - - - - - 0.992 - - 0.700
5. COL5A2 ENSGALG00000031112 18358 1.465 - - - - - - - 0.751 - 0.714 collagen type V alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2210]
6. ATOX1 ENSGALG00000004176 16486 1 - - - - - - 1.000 - - - antioxidant 1 copper chaperone [Source:NCBI gene;Acc:770231]
7. SFRP1 ENSGALG00000003473 5917 1 - - - - - - 1.000 - - - secreted frizzled related protein 1 [Source:NCBI gene;Acc:395237]
8. LGALS3 ENSGALG00000012173 3306 0.999 - - - - - - 0.999 - - - galectin 3 [Source:NCBI gene;Acc:373917]
9. ZFP161 ZFP161 3538 0.999 - - - - - - 0.999 - - -
10. COQ9 ENSGALG00000001184 10174 0.999 - - - - - - 0.999 - - - coenzyme Q9 [Source:NCBI gene;Acc:415636]
11. FAM63A 8470 0.999 - - - - - - 0.999 - - - family with sequence similarity 63 member A, transcript variant X2
12. GSTA GSTA 3130 0.999 - - - - - - 0.999 - - -
13. CCNG1 ENSGALG00000001718 9873 0.999 - - - - - - 0.999 - - - cyclin G1 [Source:HGNC Symbol;Acc:HGNC:1592]
14. DNAJC2 ENSGALG00000008249 28064 0.999 - - - - - - 0.999 - - - DnaJ heat shock protein family (Hsp40) member C2 [Source:NCBI gene;Acc:417717]
15. ENSGALG00000007210 ENSGALG00000007210 2203 0.999 - - - - - - 0.999 - - -
16. TXNRD3 ENSGALG00000039363 8016 0.999 - - - - - - 0.999 - - - thioredoxin reductase 3 [Source:NCBI gene;Acc:416031]
17. PLK1 ENSGALG00000006110 12892 0.999 - - - - - - 0.999 - - - polo like kinase 1 [Source:NCBI gene;Acc:416575]
18. ETFA ENSGALG00000002925 24053 0.999 - - - - - - 0.999 - - - electron-transfer-flavoprotein, alpha polypeptide [Source:NCBI gene;Acc:415353]
19. FIG4 ENSGALG00000015070 3018 0.999 - - - - - - 0.999 - - - FIG4 phosphoinositide 5-phosphatase [Source:NCBI gene;Acc:421762]
20. ENSGALG00000002595 ENSGALG00000002595 32163 0.999 - - - - - - 0.999 - - -
21. UTRN ENSGALG00000012256 9980 0.998 - - - - - - 0.998 - - - utrophin [Source:HGNC Symbol;Acc:HGNC:12635]
22. PAPOLA ENSGALG00000033099 20532 0.997 - - - - - - 0.997 - - - poly(A) polymerase alpha [Source:NCBI gene;Acc:395878]
23. PAK1IP1 ENSGALG00000012724 10907 0.994 - - - - - - 0.994 - - - PAK1 interacting protein 1 [Source:NCBI gene;Acc:420850]
24. SUMO1 ENSGALG00000008435 19847 0.994 - - - - - - 0.994 - - - small ubiquitin-like modifier 1 [Source:NCBI gene;Acc:373930]
25. DHX15 ENSGALG00000014395 24041 0.993 - - - - - - 0.993 - - - DEAH-box helicase 15 [Source:NCBI gene;Acc:422813]
26. ALYREF ENSGALG00000007237 48479 0.993 - - - - - - 0.993 - - - Aly/REF export factor [Source:NCBI gene;Acc:769169]
27. PTP4A1 ENSGALG00000016271 23953 0.993 - - - - - - 0.993 - - - protein tyrosine phosphatase type IVA, member 1 [Source:NCBI gene;Acc:421877]
28. GCSH ENSGALG00000032679 29231 0.99 - - - - - - 0.990 - - - glycine cleavage system protein H [Source:NCBI gene;Acc:415803]
29. NOL6 ENSGALG00000030730 7191 0.987 - - - - - - 0.987 - - - nucleolar protein 6
30. C5H11ORF58 C5H11ORF58 36659 0.986 - - - - - - 0.986 - - -
31. ENSGALG00000016007 ENSGALG00000016007 62448 0.982 - - - - - - 0.982 - - -
32. C5ORF13 C5ORF13 50177 0.963 - - - - - - 0.963 - - -
33. YWHAB ENSGALG00000004143 40276 0.963 - - - - - - 0.963 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta [Source:NCBI gene;Acc:419190]
34. SUCLG1 ENSGALG00000015961 14323 0.954 - - - - - - 0.954 - - - succinate-CoA ligase alpha subunit [Source:NCBI gene;Acc:422932]
35. gga-mir-3526 ENSGALG00000029121 41375 0.944 - - - - - - 0.944 - - - gga-mir-3526 [Source:miRBase;Acc:MI0015377]
36. TCOF1 ENSGALG00000005535 24554 0.936 - - - - - - 0.936 - - - treacle ribosome biogenesis factor 1 [Source:NCBI gene;Acc:416276]
37. LOC419404 ENSGALG00000021676 12078 0.89 - - - - - - 0.890 - - - uncharacterized LOC419404
38. TCEB1 TCEB1 17818 0.855 - - - - - - 0.855 - - -
39. ETF1 ENSGALG00000002262 14560 0.85 - - - - - - 0.850 - - - eukaryotic translation termination factor 1 [Source:HGNC Symbol;Acc:HGNC:3477]
40. SMC3 ENSGALG00000008585 16618 0.845 - - - - - - 0.845 - - - structural maintenance of chromosomes 3 [Source:NCBI gene;Acc:395188]
41. HMGB1 ENSGALG00000042875 83509 0.844 - - - - - - 0.844 - - - high mobility group box 1 [Source:NCBI gene;Acc:395724]
42. ANKMY2 ENSGALG00000010804 3061 0.841 - - - - - - - 0.841 - - ankyrin repeat and MYND domain containing 2 [Source:NCBI gene;Acc:420593]
43. CALM CALM 85776 0.827 - - - - - - 0.827 - - -
44. SH3BGRL ENSGALG00000007128 18708 0.824 - - - - - - 0.824 - - - SH3 domain binding glutamate rich protein like [Source:NCBI gene;Acc:422277]
45. PTPLB PTPLB 13107 0.823 - - - - - - - - - 0.823
46. TTC32 ENSGALG00000016476 2962 0.815 - - - - - - - 0.815 - - tetratricopeptide repeat domain 32 [Source:HGNC Symbol;Acc:HGNC:32954]
47. ZYG11B ENSGALG00000010643 2555 0.81 - - - - - - - 0.810 - - zyg-11 family member B, cell cycle regulator [Source:HGNC Symbol;Acc:HGNC:25820]
48. MBNL2 ENSGALG00000016890 3162 0.809 - - - - - - - - - 0.809 muscleblind like splicing regulator 2 [Source:NCBI gene;Acc:418784]
49. COTL1 ENSGALG00000017644 81 0.808 - - - - - - - - 0.808 - coactosin like F-actin binding protein 1 [Source:NCBI gene;Acc:768420]
50. CAMSAP1 ENSGALG00000001692 2617 0.803 - - - - - - - - - 0.803 calmodulin regulated spectrin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:19946]
51. TOX2 ENSGALG00000003106 2472 0.799 - - - - - - - - 0.799 - TOX high mobility group box family member 2, transcript variant X1
52. TPD52L2 ENSGALG00000004683 13624 0.799 - - - - - - - 0.799 - - tumor protein D52 like 2 [Source:NCBI gene;Acc:419257]
53. TMX4 ENSGALG00000028587 3513 0.795 - - - - - - - - - 0.795 thioredoxin related transmembrane protein 4 [Source:NCBI gene;Acc:416729]
54. CTSO ENSGALG00000009373 4186 0.791 - - - - - - - - - 0.791 cathepsin O [Source:NCBI gene;Acc:422410]
55. RAD18 ENSGALG00000008368 7214 0.79 - - - - - - - - - 0.790 RAD18, E3 ubiquitin protein ligase [Source:NCBI gene;Acc:416114]
56. FAM49A ENSGALG00000016463 6345 0.789 - - - - - - - 0.789 - - family with sequence similarity 49 member A [Source:NCBI gene;Acc:421949]
57. B3GAT2 ENSGALG00000031590 615 0.789 - - - - - - - - 0.789 - beta-1,3-glucuronyltransferase 2 [Source:NCBI gene;Acc:428638]
58. AFG3L2 ENSGALG00000013853 1138 0.789 - - - - - - - - - 0.789 AFG3 like matrix AAA peptidase subunit 2 [Source:HGNC Symbol;Acc:HGNC:315]
59. PSMC2 ENSGALG00000008236 25980 0.786 - - - - - - - - - 0.786 proteasome 26S subunit, ATPase 2 [Source:NCBI gene;Acc:417716]
60. SMAP1 ENSGALG00000015959 4665 0.785 - - - - - - - - - 0.785 small ArfGAP 1 [Source:HGNC Symbol;Acc:HGNC:19651]
61. ZRANB1 ENSGALG00000031474 3909 0.778 - - - - - - - - - 0.778 zinc finger RANBP2-type containing 1 [Source:HGNC Symbol;Acc:HGNC:18224]
62. MT-ND3 MT-ND3 510729 0.777 - - - - - 0.777 - - - -
63. TXNDC11 ENSGALG00000003154 2224 0.777 - - - - - - - - - 0.777 thioredoxin domain containing 11 [Source:HGNC Symbol;Acc:HGNC:28030]
64. RER1 ENSGALG00000021683 9074 0.775 - - - - - - - - - 0.775 retention in endoplasmic reticulum sorting receptor 1 [Source:NCBI gene;Acc:419397]
65. RAMP2 ENSGALG00000024449 5860 0.775 - - - - - - - - - 0.775 receptor activity modifying protein 2 [Source:NCBI gene;Acc:420022]
66. ENSGALG00000009044 ENSGALG00000009044 14492 0.775 - - - - - - - - - 0.775
67. MMP2 ENSGALG00000003580 13120 0.772 - - - - - 0.772 - - - - matrix metallopeptidase 2 [Source:NCBI gene;Acc:386583]
68. 5 5 4209 0.771 - - - - - - - - - 0.771
69. FECH ENSGALG00000038461 3491 0.771 - - - - - - - - - 0.771 ferrochelatase [Source:NCBI gene;Acc:374020]
70. TPX2 ENSGALG00000006267 26087 0.771 - - - - - - - - - 0.771 TPX2, microtubule nucleation factor [Source:NCBI gene;Acc:395081]
71. IDUA ENSGALG00000015376 938 0.769 - - - - - - - - 0.769 - iduronidase, alpha-L- [Source:NCBI gene;Acc:427294]
72. SSFA2 2288 0.768 - - - - - 0.768 - - - - sperm specific antigen 2, transcript variant X2
73. KCTD9 ENSGALG00000000275 3455 0.767 - - - - - - - - 0.767 - potassium channel tetramerization domain containing 9 [Source:NCBI gene;Acc:419526]
74. PNPT1 ENSGALG00000043545 1306 0.767 - - - - - - - - - 0.767 polyribonucleotide nucleotidyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:23166]
75. MYEOV2 MYEOV2 5155 0.765 - - - - - - - - - 0.765
76. FNBP4 ENSGALG00000029702 6421 0.765 - - - - - - - 0.765 - - formin binding protein 4 [Source:HGNC Symbol;Acc:HGNC:19752]
77. ECI2 ENSGALG00000012809 3692 0.764 - - - - - - - - - 0.764 enoyl-CoA delta isomerase 2 [Source:HGNC Symbol;Acc:HGNC:14601]
78. GPX8 ENSGALG00000026704 4497 0.763 - - - - - - - - - 0.763 glutathione peroxidase 8 (putative) [Source:HGNC Symbol;Acc:HGNC:33100]
79. C15orf40 C15orf40 3212 0.762 - - - - - - - 0.762 - -
80. UBL3 ENSGALG00000017084 7417 0.761 - - - - - - - - - 0.761 ubiquitin like 3 [Source:NCBI gene;Acc:418921]
81. ANXA1 ENSGALG00000015148 13804 0.761 - - - - - 0.761 - - - - annexin A1 [Source:NCBI gene;Acc:404271]
82. UTP23 ENSGALG00000032400 3601 0.76 - - - - - - - - - 0.760 UTP23, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:28224]
83. CACHD1 ENSGALG00000011024 2036 0.76 - - - - - - - - - 0.760 cache domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29314]
84. NET1 ENSGALG00000008437 9850 0.759 - - - - - 0.759 - - - - neuroepithelial cell transforming 1 [Source:NCBI gene;Acc:416693]
85. CPSF2 ENSGALG00000010783 5236 0.758 - - - - - - - - - 0.758 cleavage and polyadenylation specific factor 2 [Source:NCBI gene;Acc:423416]
86. PRDM4 ENSGALG00000012619 876 0.757 - - - - - - - - - 0.757 PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
87. CWC22 ENSGALG00000009001 5984 0.757 - - - - - - - - - 0.757 CWC22 spliceosome associated protein homolog [Source:NCBI gene;Acc:424123]
88. UCHL3 ENSGALG00000016921 16208 0.754 - - - - - - - - - 0.754 ubiquitin C-terminal hydrolase L3 [Source:NCBI gene;Acc:395626]
89. GGT7 ENSGALG00000001062 476 0.754 - - - - - - - - 0.754 - gamma-glutamyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:4259]
90. TMEM9B ENSGALG00000005908 14074 0.753 - - - - - - - - - 0.753 TMEM9 domain family member B [Source:HGNC Symbol;Acc:HGNC:1168]
91. UPF2 ENSGALG00000033772 9548 0.753 - - - - - - - - - 0.753 UPF2, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:17854]
92. TXNDC5 ENSGALG00000012784 4678 0.752 - - - - - - - - - 0.752 thioredoxin domain containing 5 [Source:NCBI gene;Acc:420867]
93. CPNE1 ENSGALG00000040856 610 0.752 - - - - - - - - - 0.752 copine 1 [Source:NCBI gene;Acc:419134]
94. U2AF1 ENSGALG00000016198 45027 0.75 - - - - - - 0.750 - - - U2 small nuclear RNA auxiliary factor 1 [Source:NCBI gene;Acc:395370]
95. TEAD4 ENSGALG00000014342 6123 0.749 - - - - - - - 0.749 - - Gallus gallus TEA domain transcription factor 4 (TEAD4), transcript variant 7, mRNA. [Source:RefSeq mRNA;Acc:NM_001359859]
96. DOCK1 ENSGALG00000042259 5438 0.749 - - - - - - - - - 0.749 dedicator of cytokinesis 1 [Source:HGNC Symbol;Acc:HGNC:2987]
97. HEXA ENSGALG00000043828 4789 0.748 - - - - - - - - - 0.748 hexosaminidase subunit alpha [Source:NCBI gene;Acc:415320]
98. KCNMA1 ENSGALG00000004980 261 0.748 - - - - - 0.748 - - - - potassium calcium-activated channel subfamily M alpha 1 [Source:NCBI gene;Acc:374065]
99. PHF13 ENSGALG00000028148 1240 0.748 - - - - - - - - - 0.748 PHD finger protein 13 [Source:NCBI gene;Acc:101750144]
100. DTWD2 ENSGALG00000002250 1604 0.748 - - - - - - - - 0.748 - DTW domain containing 2 [Source:NCBI gene;Acc:427386]

There are 109 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA